FFCP PHASE1:Hg19::chr13:35516390..35516496,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:35516390..35516496,+
|short_description=p1@NBEA
|description=CAGE_peak_1_at_NBEA_5end
|association_with_transcript=0bp_to_ENST00000310336,ENST00000379939,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26960 | |EntrezGene=26960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7648 | |HGNC=7648 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFP9,Q5T321,E9PG20,F5GXV7,B3KXQ8 | |UniProt=Q8NFP9,Q5T321,E9PG20,F5GXV7,B3KXQ8 | ||
|association_with_transcript=0bp_to_ENST00000310336,ENST00000379939,ENST00000400445,ENST00000402346,ENST00000422518,ENST00000540320,NM_015678,uc001uvb.2_5end | |||
|cluster_id=chr13:35516390..35516496,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_NBEA_5end | |||
|id=chr13:35516390..35516496,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.76e-40!115;UBERON:0000073!2.02e-37!94;UBERON:0001016!2.02e-37!94;UBERON:0005743!9.04e-37!86;UBERON:0001017!5.53e-35!82;UBERON:0001049!2.53e-29!57;UBERON:0005068!2.53e-29!57;UBERON:0006241!2.53e-29!57;UBERON:0007135!2.53e-29!57;UBERON:0000955!2.58e-29!69;UBERON:0006238!2.58e-29!69;UBERON:0002616!1.71e-27!59;UBERON:0003075!7.29e-27!86;UBERON:0007284!7.29e-27!86;UBERON:0002346!2.64e-26!90;UBERON:0002780!1.27e-24!41;UBERON:0001890!1.27e-24!41;UBERON:0006240!1.27e-24!41;UBERON:0003080!3.32e-24!42;UBERON:0004121!4.89e-24!169;UBERON:0000924!5.86e-24!173;UBERON:0006601!5.86e-24!173;UBERON:0000153!3.03e-21!129;UBERON:0007811!3.03e-21!129;UBERON:0000033!9.40e-21!123;UBERON:0001893!1.59e-20!34;UBERON:0003056!2.16e-20!61;UBERON:0002020!2.28e-20!34;UBERON:0003528!2.28e-20!34;UBERON:0002791!7.08e-20!33;UBERON:0001869!9.01e-20!32;UBERON:0002619!1.01e-15!22;UBERON:0000956!1.15e-15!25;UBERON:0000203!1.15e-15!25;UBERON:0001950!1.74e-14!20;UBERON:0000475!3.21e-12!365;UBERON:0000481!4.85e-10!347;UBERON:0000477!2.90e-09!286;UBERON:0000025!8.41e-09!194;UBERON:0004111!3.18e-08!241;UBERON:0000062!5.31e-08!511;UBERON:0000468!2.97e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.22e-18;32!UBERON:0002780;1.52e-18;41!UBERON:0001890;1.52e-18;41!UBERON:0002791;2.13e-18;32!UBERON:0001893;2.40e-18;34!UBERON:0003528;2.74e-18;34!UBERON:0002020;2.74e-18;34!UBERON:0000073;2.83e-17;53!UBERON:0002616;2.83e-17;53!UBERON:0002619;2.75e-16;22!UBERON:0000956;2.87e-16;25!UBERON:0000203;2.87e-16;25!UBERON:0001950;5.32e-15;20!UBERON:0000955;5.04e-14;68!UBERON:0001017;1.71e-13;75!UBERON:0001016;4.42e-13;83!UBERON:0007023;6.52e-12;114!UBERON:0000922;5.14e-07;49!UBERON:0011216;9.00e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.56e-40,114;UBERON:0001016,6.52e-37,89;UBERON:0001017,2.72e-36,81;UBERON:0001049,1.52e-30,56;UBERON:0005068,1.52e-30,56;UBERON:0006241,1.52e-30,56;UBERON:0007135,1.52e-30,56;UBERON:0000955,1.89e-30,68;UBERON:0006238,1.89e-30,68;UBERON:0000073,2.44e-29,53;UBERON:0002616,2.44e-29,53;UBERON:0003075,1.96e-27,82;UBERON:0007284,1.96e-27,82;UBERON:0002346,8.05e-27,86;UBERON:0002780,2.53e-25,41;UBERON:0001890,2.53e-25,41;UBERON:0003080,2.53e-25,41;UBERON:0006240,2.53e-25,41;UBERON:0004121,9.14e-25,171;UBERON:0000924,9.14e-25,171;UBERON:0006601,9.14e-25,171;UBERON:0011216,3.11e-23,223;UBERON:0003056,5.72e-22,61;UBERON:0001893,4.22e-21,34;UBERON:0003528,6.13e-21,34;UBERON:0002020,6.13e-21,34;UBERON:0001869,2.53e-20,32;UBERON:0002791,5.12e-20,32;UBERON:0010314,2.97e-19,132;UBERON:0010371,3.51e-19,104;UBERON:0002619,3.74e-16,22;UBERON:0000956,4.28e-16,25;UBERON:0000203,4.28e-16,25;UBERON:0001950,7.07e-15,20;UBERON:0000025,2.37e-08,192;UBERON:0004111,7.56e-08,240 | |||
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| ||
|short_description=p1@NBEA | |||
}} | }} |
Latest revision as of 04:59, 17 September 2015
Short description: | p1@NBEA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NBEA_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000310336, ENST00000379939, ENST00000400445, ENST00000402346, ENST00000422518, ENST00000540320, NM_015678, uc001uvb.2_5end |
EntrezGene: | NBEA |
HGNC: | 7648 |
UniProt: | Q8NFP9Q5T321E9PG20F5GXV7B3KXQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data