FFCP PHASE1:Hg19::chr16:6069184..6069193,+: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54715 | |EntrezGene=54715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |HGNC=18222 | ||
|TSSclassifier=strong | |||
|UniProt=Q59HD3,Q9NWB1 | |UniProt=Q59HD3,Q9NWB1 | ||
|association_with_transcript=52bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | |||
|cluster_id=chr16:6069184..6069193,+ | |||
|coexpression_cluster_id=C2315 | |||
|description=CAGE_peak_29_at_RBFOX1_5end | |||
|id=chr16:6069184..6069193,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.96e-81!57;UBERON:0005068!5.96e-81!57;UBERON:0006241!5.96e-81!57;UBERON:0007135!5.96e-81!57;UBERON:0002616!5.31e-78!59;UBERON:0001893!3.44e-74!34;UBERON:0000955!2.68e-73!69;UBERON:0006238!2.68e-73!69;UBERON:0001869!6.84e-73!32;UBERON:0001017!1.92e-72!82;UBERON:0002780!2.77e-71!41;UBERON:0001890!2.77e-71!41;UBERON:0006240!2.77e-71!41;UBERON:0002791!2.57e-70!33;UBERON:0003080!1.78e-69!42;UBERON:0005743!8.79e-69!86;UBERON:0002619!7.87e-67!22;UBERON:0001950!4.55e-66!20;UBERON:0000073!5.09e-65!94;UBERON:0001016!5.09e-65!94;UBERON:0002020!1.35e-62!34;UBERON:0003528!1.35e-62!34;UBERON:0000956!1.39e-58!25;UBERON:0000203!1.39e-58!25;UBERON:0003075!9.27e-55!86;UBERON:0007284!9.27e-55!86;UBERON:0002346!5.17e-52!90;UBERON:0003056!3.29e-46!61;UBERON:0000033!2.65e-43!123;UBERON:0000153!5.98e-41!129;UBERON:0007811!5.98e-41!129;UBERON:0007023!1.84e-39!115;UBERON:0004121!4.56e-33!169;UBERON:0000924!3.98e-32!173;UBERON:0006601!3.98e-32!173;UBERON:0000200!2.72e-27!6;UBERON:0002021!2.60e-22!5;UBERON:0001871!1.40e-20!7;UBERON:0000025!4.27e-20!194;UBERON:0004733!1.02e-16!12;UBERON:0002028!1.02e-16!12;UBERON:0007277!1.02e-16!12;UBERON:0004111!7.17e-16!241;UBERON:0004732!2.31e-15!13;UBERON:0002771!1.06e-14!3;UBERON:0001872!1.19e-14!5;UBERON:0003076!3.43e-13!15;UBERON:0003057!3.43e-13!15;UBERON:0000477!3.47e-13!286;UBERON:0000064!2.28e-12!219;UBERON:0002420!4.33e-12!9;UBERON:0007245!4.33e-12!9;UBERON:0010009!4.33e-12!9;UBERON:0010011!4.33e-12!9;UBERON:0000454!4.33e-12!9;UBERON:0002680!7.10e-12!9;UBERON:0001895!7.10e-12!9;UBERON:0010092!7.10e-12!9;UBERON:0002037!8.68e-12!6;UBERON:0006215!8.68e-12!6;UBERON:0000483!1.24e-10!309;UBERON:0000369!1.62e-10!4;UBERON:0002435!1.62e-10!4;UBERON:0000204!1.62e-10!4;UBERON:0010082!1.62e-10!4;UBERON:0000119!1.86e-10!312;UBERON:0000475!3.42e-10!365;UBERON:0009663!4.06e-10!7;UBERON:0001870!4.20e-10!2;UBERON:0000349!1.26e-08!5;UBERON:0000481!5.82e-08!347;UBERON:0002308!6.93e-08!9;UBERON:0000125!6.93e-08!9;UBERON:0005383!7.83e-07!3;UBERON:0005382!7.83e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.16e-41;20!UBERON:0001871;3.26e-41;6!UBERON:0002619;4.94e-38;22!UBERON:0002771;1.42e-36;2!UBERON:0000956;1.23e-33;25!UBERON:0000203;1.23e-33;25!UBERON:0002791;3.40e-23;32!UBERON:0001869;4.50e-23;32!UBERON:0003528;1.55e-22;34!UBERON:0002020;1.55e-22;34!UBERON:0001893;8.15e-22;34!UBERON:0003112;3.25e-19;1!UBERON:0011158;3.25e-19;1!UBERON:0003128;3.25e-19;1!UBERON:0001703;3.25e-19;1!UBERON:0002241;3.25e-19;1!UBERON:0002780;1.13e-15;41!UBERON:0001890;1.13e-15;41!UBERON:0002021;1.68e-15;5!UBERON:0000073;1.47e-14;53!UBERON:0002616;1.47e-14;53!UBERON:0000200;6.50e-13;6!UBERON:0001016;2.67e-10;83!UBERON:0001876;2.72e-10;2!UBERON:0000955;3.69e-10;68!UBERON:0001017;5.66e-08;75!UBERON:0002114;2.12e-07;2!UBERON:0000922;4.77e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.20e-41,20;UBERON:0001871,3.81e-41,6;UBERON:0002619,5.08e-38,22;UBERON:0002771,1.42e-36,2;UBERON:0000956,1.27e-33,25;UBERON:0000203,1.27e-33,25;UBERON:0002791,1.83e-26,32;UBERON:0001869,1.83e-26,32;UBERON:0003528,6.06e-25,34;UBERON:0002020,6.06e-25,34;UBERON:0001893,6.06e-25,34;UBERON:0000073,6.13e-21,53;UBERON:0002616,6.13e-21,53;UBERON:0002780,9.34e-21,41;UBERON:0001890,9.34e-21,41;UBERON:0003080,9.34e-21,41;UBERON:0006240,9.34e-21,41;UBERON:0001049,8.09e-20,56;UBERON:0005068,8.09e-20,56;UBERON:0006241,8.09e-20,56;UBERON:0007135,8.09e-20,56;UBERON:0003112,3.25e-19,1;UBERON:0011158,3.25e-19,1;UBERON:0003128,3.25e-19,1;UBERON:0001703,3.25e-19,1;UBERON:0002241,3.25e-19,1;UBERON:0004761,3.25e-19,1;UBERON:0009617,3.25e-19,1;UBERON:0001017,4.95e-17,81;UBERON:0000955,4.58e-16,68;UBERON:0006238,4.58e-16,68;UBERON:0002021,1.62e-15,5;UBERON:0001016,2.58e-15,89;UBERON:0003056,5.58e-14,61;UBERON:0003075,1.76e-13,82;UBERON:0007284,1.76e-13,82;UBERON:0000200,6.50e-13,6;UBERON:0002346,7.69e-13,86;UBERON:0010371,1.48e-10,104;UBERON:0010314,2.02e-10,132;UBERON:0005253,2.72e-10,2;UBERON:0001876,2.99e-10,2;UBERON:0011216,6.17e-09,223;UBERON:0004121,8.47e-08,171;UBERON:0000924,8.47e-08,171;UBERON:0006601,8.47e-08,171;UBERON:0002114,2.05e-07,2 | |||
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| ||
|short_description=p29@RBFOX1 | |||
}} | }} |
Latest revision as of 06:52, 17 September 2015
Short description: | p29@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_RBFOX1_5end |
Coexpression cluster: | C2315_occipital_parietal_temporal_duodenum_medial_brain_putamen |
Association with transcript: | 52bp_to_ENST00000550418, ENST00000553186, NM_001142333, NM_018723, uc002cyr.1, uc002cys.2, uc002cyt.2, uc010buf.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q59HD3Q9NWB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data