FFCP PHASE1:Hg19::chr2:45169179..45169190,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt=O95343 | |UniProt=O95343 | ||
|association_with_transcript=142bp_to_NM_005413,uc002run.1_5end | |association_with_transcript=142bp_to_NM_005413,uc002run.1_5end | ||
|cluster_id=chr2:45169179..45169190,+ | |||
|coexpression_cluster_id=C573 | |||
|description=CAGE_peak_8_at_SIX3_5end | |description=CAGE_peak_8_at_SIX3_5end | ||
|id=chr2:45169179..45169190,+ | |id=chr2:45169179..45169190,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.35e-12!5;CL:0000064!2.63e-09!3;CL:0005012!2.63e-09!3;CL:0000067!2.63e-09!3;CL:0002304!2.63e-09!3;CL:0002586!2.85e-09!3;CL:0000147!1.99e-08!14;CL:0000306!5.04e-07!4;CL:0002222!5.04e-07!4;CL:0002224!5.04e-07!4;CL:0000149!5.14e-07!4 | |ontology_enrichment_celltype=CL:0002322!4.35e-12!5;CL:0000064!2.63e-09!3;CL:0005012!2.63e-09!3;CL:0000067!2.63e-09!3;CL:0002304!2.63e-09!3;CL:0002586!2.85e-09!3;CL:0000147!1.99e-08!14;CL:0000306!5.04e-07!4;CL:0002222!5.04e-07!4;CL:0002224!5.04e-07!4;CL:0000149!5.14e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.94e-22;3!CL:0000067;2.94e-22;3!CL:0005012;2.94e-22;3!CL:0002304;2.94e-22;3!CL:0002586;6.20e-22;3!CL:0000306;9.47e-17;4!CL:0002222;9.47e-17;4!CL:0002224;9.47e-17;4!CL:0000149;1.34e-16;4!CL:0000075;4.51e-09;27!CL:0000342;2.09e-08;1!CL:0002565;2.09e-08;1!CL:0000147;2.75e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.05e-22,3;CL:0000067,3.05e-22,3;CL:0005012,3.05e-22,3;CL:0002304,3.05e-22,3;CL:0002586,3.78e-22,3;CL:0000306,8.76e-17,4;CL:0002222,8.76e-17,4;CL:0002224,8.76e-17,4;CL:0000149,9.24e-17,4;CL:0000075,4.45e-09,27;CL:0000342,2.02e-08,1;CL:0002565,2.02e-08,1;CL:0000147,2.38e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.78e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!8.88e-32!61;UBERON:0002346!4.35e-30!90;UBERON:0003075!3.24e-28!86;UBERON:0007284!3.24e-28!86;UBERON:0007625!2.99e-24!11;UBERON:0000073!9.33e-22!94;UBERON:0001016!9.33e-22!94;UBERON:0000970!4.49e-21!20;UBERON:0002104!6.76e-20!21;UBERON:0000924!3.40e-19!173;UBERON:0006601!3.40e-19!173;UBERON:0000019!6.43e-19!19;UBERON:0000047!6.43e-19!19;UBERON:0004088!6.43e-19!19;UBERON:0003072!6.43e-19!19;UBERON:0003071!6.43e-19!19;UBERON:0004128!6.43e-19!19;UBERON:0005743!1.39e-18!86;UBERON:0000020!7.49e-18!23;UBERON:0004121!9.91e-18!169;UBERON:0000033!1.24e-17!123;UBERON:0001032!5.87e-17!24;UBERON:0004456!5.87e-17!24;UBERON:0001456!8.30e-17!21;UBERON:0000153!2.29e-16!129;UBERON:0007811!2.29e-16!129;UBERON:0002780!3.83e-16!41;UBERON:0001890!3.83e-16!41;UBERON:0006240!3.83e-16!41;UBERON:0003080!1.19e-15!42;UBERON:0000966!3.25e-14!5;UBERON:0005388!3.25e-14!5;UBERON:0001802!3.25e-14!5;UBERON:0002420!7.59e-14!9;UBERON:0007245!7.59e-14!9;UBERON:0010009!7.59e-14!9;UBERON:0010011!7.59e-14!9;UBERON:0000454!7.59e-14!9;UBERON:0001017!9.18e-14!82;UBERON:0002616!1.02e-13!59;UBERON:0009663!1.39e-13!7;UBERON:0000955!3.11e-13!69;UBERON:0006238!3.11e-13!69;UBERON:0001049!7.40e-13!57;UBERON:0005068!7.40e-13!57;UBERON:0006241!7.40e-13!57;UBERON:0007135!7.40e-13!57;UBERON:0002791!1.39e-12!33;UBERON:0001893!4.06e-12!34;UBERON:0000488!8.59e-12!4;UBERON:0001869!2.10e-11!32;UBERON:0005085!2.67e-11!29;UBERON:0000369!3.24e-11!4;UBERON:0002435!3.24e-11!4;UBERON:0000204!3.24e-11!4;UBERON:0010082!3.24e-11!4;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0002308!2.28e-10!9;UBERON:0000125!2.28e-10!9;UBERON:0001778!2.63e-09!3;UBERON:0001775!2.63e-09!3;UBERON:0001781!2.85e-09!3;UBERON:0001782!2.85e-09!3;UBERON:0005424!2.85e-09!3;UBERON:0001801!5.15e-09!14;UBERON:0005383!7.53e-09!3;UBERON:0005382!7.53e-09!3;UBERON:0007023!1.07e-08!115;UBERON:0000064!7.60e-08!219;UBERON:0002203!8.22e-08!6;UBERON:0001768!8.22e-08!6;UBERON:0000922!1.28e-07!612;UBERON:0010077!5.04e-07!4;UBERON:0005389!5.04e-07!4;UBERON:0000484!5.04e-07!4;UBERON:0002546!5.04e-07!4;UBERON:0000965!5.04e-07!4;UBERON:0001803!5.04e-07!4;UBERON:0003073!5.04e-07!4;UBERON:0005426!5.04e-07!4 | |ontology_enrichment_uberon=UBERON:0003056!8.88e-32!61;UBERON:0002346!4.35e-30!90;UBERON:0003075!3.24e-28!86;UBERON:0007284!3.24e-28!86;UBERON:0007625!2.99e-24!11;UBERON:0000073!9.33e-22!94;UBERON:0001016!9.33e-22!94;UBERON:0000970!4.49e-21!20;UBERON:0002104!6.76e-20!21;UBERON:0000924!3.40e-19!173;UBERON:0006601!3.40e-19!173;UBERON:0000019!6.43e-19!19;UBERON:0000047!6.43e-19!19;UBERON:0004088!6.43e-19!19;UBERON:0003072!6.43e-19!19;UBERON:0003071!6.43e-19!19;UBERON:0004128!6.43e-19!19;UBERON:0005743!1.39e-18!86;UBERON:0000020!7.49e-18!23;UBERON:0004121!9.91e-18!169;UBERON:0000033!1.24e-17!123;UBERON:0001032!5.87e-17!24;UBERON:0004456!5.87e-17!24;UBERON:0001456!8.30e-17!21;UBERON:0000153!2.29e-16!129;UBERON:0007811!2.29e-16!129;UBERON:0002780!3.83e-16!41;UBERON:0001890!3.83e-16!41;UBERON:0006240!3.83e-16!41;UBERON:0003080!1.19e-15!42;UBERON:0000966!3.25e-14!5;UBERON:0005388!3.25e-14!5;UBERON:0001802!3.25e-14!5;UBERON:0002420!7.59e-14!9;UBERON:0007245!7.59e-14!9;UBERON:0010009!7.59e-14!9;UBERON:0010011!7.59e-14!9;UBERON:0000454!7.59e-14!9;UBERON:0001017!9.18e-14!82;UBERON:0002616!1.02e-13!59;UBERON:0009663!1.39e-13!7;UBERON:0000955!3.11e-13!69;UBERON:0006238!3.11e-13!69;UBERON:0001049!7.40e-13!57;UBERON:0005068!7.40e-13!57;UBERON:0006241!7.40e-13!57;UBERON:0007135!7.40e-13!57;UBERON:0002791!1.39e-12!33;UBERON:0001893!4.06e-12!34;UBERON:0000488!8.59e-12!4;UBERON:0001869!2.10e-11!32;UBERON:0005085!2.67e-11!29;UBERON:0000369!3.24e-11!4;UBERON:0002435!3.24e-11!4;UBERON:0000204!3.24e-11!4;UBERON:0010082!3.24e-11!4;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0002308!2.28e-10!9;UBERON:0000125!2.28e-10!9;UBERON:0001778!2.63e-09!3;UBERON:0001775!2.63e-09!3;UBERON:0001781!2.85e-09!3;UBERON:0001782!2.85e-09!3;UBERON:0005424!2.85e-09!3;UBERON:0001801!5.15e-09!14;UBERON:0005383!7.53e-09!3;UBERON:0005382!7.53e-09!3;UBERON:0007023!1.07e-08!115;UBERON:0000064!7.60e-08!219;UBERON:0002203!8.22e-08!6;UBERON:0001768!8.22e-08!6;UBERON:0000922!1.28e-07!612;UBERON:0010077!5.04e-07!4;UBERON:0005389!5.04e-07!4;UBERON:0000484!5.04e-07!4;UBERON:0002546!5.04e-07!4;UBERON:0000965!5.04e-07!4;UBERON:0001803!5.04e-07!4;UBERON:0003073!5.04e-07!4;UBERON:0005426!5.04e-07!4 | ||
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|short_description=p8@SIX3 | |short_description=p8@SIX3 | ||
}} | }} |
Latest revision as of 09:41, 17 September 2015
Short description: | p8@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SIX3_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | 142bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.05e-22 | 3 |
ciliated epithelial cell | 3.05e-22 | 3 |
multi-ciliated epithelial cell | 3.05e-22 | 3 |
non-pigmented ciliary epithelial cell | 3.05e-22 | 3 |
retinal pigment epithelial cell | 3.78e-22 | 3 |
crystallin accumulating cell | 8.76e-17 | 4 |
vertebrate lens cell | 8.76e-17 | 4 |
lens epithelial cell | 8.76e-17 | 4 |
visual pigment cell | 9.24e-17 | 4 |
columnar/cuboidal epithelial cell | 4.45e-09 | 27 |
pigment cell (sensu Vertebrata) | 2.02e-08 | 1 |
iris pigment epithelial cell | 2.02e-08 | 1 |
pigment cell | 2.38e-08 | 14 |