FFCP PHASE1:Hg19::chr5:179499108..179499147,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:179499108..179499147,-
|short_description=p2@RNF130
|description=CAGE_peak_2_at_RNF130_5end
|association_with_transcript=0bp_to_ENST00000520911,ENST0000052...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55819 | |EntrezGene=55819 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18280 | |HGNC=18280 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XS8,Q59EL1 | |UniProt=Q86XS8,Q59EL1 | ||
|association_with_transcript=0bp_to_ENST00000520911,ENST00000521389,NM_018434,uc003mll.1,uc003mlm.1_5end | |||
|cluster_id=chr5:179499108..179499147,- | |||
|description=CAGE_peak_2_at_RNF130_5end | |||
|id=chr5:179499108..179499147,- | |||
|ontology_enrichment_celltype=CL:0000763!4.93e-21!112;CL:0000049!4.93e-21!112;CL:0000766!6.58e-19!76;CL:0002194!9.00e-18!63;CL:0000576!9.00e-18!63;CL:0000040!9.00e-18!63;CL:0000559!9.00e-18!63;CL:0000557!5.97e-17!71;CL:0000839!1.40e-16!70;CL:0002009!5.68e-16!65;CL:0002057!1.27e-12!42;CL:0000860!1.05e-11!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.17e-12;39!CL:0000234;3.17e-12;39!CL:0000860;6.17e-11;33!CL:0002057;6.17e-11;33!CL:0000576;1.92e-10;48!CL:0000763;2.62e-09;100!CL:0000766;1.21e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.33e-22,108;CL:0000049,4.33e-22,108;CL:0000766,2.84e-20,72;CL:0002194,2.65e-19,59;CL:0000576,2.65e-19,59;CL:0000040,2.65e-19,59;CL:0000559,2.65e-19,59;CL:0000557,2.88e-18,67;CL:0000839,6.89e-18,66;CL:0002009,2.52e-17,61;CL:0000473,5.03e-16,48;CL:0000234,5.03e-16,48;CL:0000860,1.27e-12,42;CL:0002057,1.27e-12,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-09;42!CL:0000049;1.47e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!1.73e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.87e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.73e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.40e-19!57;UBERON:0005068!9.40e-19!57;UBERON:0006241!9.40e-19!57;UBERON:0007135!9.40e-19!57;UBERON:0005743!2.37e-17!86;UBERON:0002616!2.91e-17!59;UBERON:0001017!3.26e-17!82;UBERON:0000073!6.17e-16!94;UBERON:0001016!6.17e-16!94;UBERON:0000955!9.26e-16!69;UBERON:0006238!9.26e-16!69;UBERON:0001474!3.47e-15!86;UBERON:0002371!5.66e-15!80;UBERON:0003080!6.09e-14!42;UBERON:0002780!1.95e-13!41;UBERON:0001890!1.95e-13!41;UBERON:0006240!1.95e-13!41;UBERON:0003075!5.69e-13!86;UBERON:0007284!5.69e-13!86;UBERON:0002346!1.34e-12!90;UBERON:0007023!2.01e-12!115;UBERON:0002020!9.64e-12!34;UBERON:0003528!9.64e-12!34;UBERON:0004765!1.19e-11!101;UBERON:0001434!1.19e-11!101;UBERON:0001893!1.96e-11!34;UBERON:0002791!2.79e-11!33;UBERON:0002405!3.21e-11!115;UBERON:0001869!2.20e-10!32;UBERON:0003056!4.43e-10!61;UBERON:0002619!3.76e-09!22;UBERON:0002390!7.46e-09!102;UBERON:0003061!7.46e-09!102;UBERON:0000956!7.85e-09!25;UBERON:0000203!7.85e-09!25;UBERON:0002193!2.29e-08!112;UBERON:0001950!2.32e-08!20;UBERON:0000033!2.53e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.12e-10;53!UBERON:0002616;3.12e-10;53!UBERON:0002780;3.49e-10;41!UBERON:0001890;3.49e-10;41!UBERON:0003528;8.93e-10;34!UBERON:0002020;8.93e-10;34!UBERON:0002791;1.62e-09;32!UBERON:0001893;1.80e-09;34!UBERON:0001869;3.07e-09;32!UBERON:0002619;4.01e-09;22!UBERON:0000956;1.07e-08;25!UBERON:0000203;1.07e-08;25!UBERON:0001950;2.57e-08;20!UBERON:0000955;4.15e-07;68!UBERON:0001017;4.78e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.12e-18,56;UBERON:0005068,3.12e-18,56;UBERON:0006241,3.12e-18,56;UBERON:0007135,3.12e-18,56;UBERON:0000073,4.67e-17,53;UBERON:0002616,4.67e-17,53;UBERON:0001017,9.69e-17,81;UBERON:0001474,3.41e-16,82;UBERON:0002371,4.92e-16,76;UBERON:0001016,2.69e-15,89;UBERON:0000955,2.77e-15,68;UBERON:0006238,2.77e-15,68;UBERON:0003075,8.58e-14,82;UBERON:0007284,8.58e-14,82;UBERON:0004765,1.07e-13,90;UBERON:0002780,1.95e-13,41;UBERON:0001890,1.95e-13,41;UBERON:0003080,1.95e-13,41;UBERON:0006240,1.95e-13,41;UBERON:0002346,2.29e-13,86;UBERON:0007023,4.78e-12,114;UBERON:0001434,4.83e-12,100;UBERON:0003528,9.64e-12,34;UBERON:0002020,9.64e-12,34;UBERON:0001893,1.96e-11,34;UBERON:0002405,3.28e-11,93;UBERON:0002791,8.28e-11,32;UBERON:0001869,2.20e-10,32;UBERON:0003056,3.95e-10,61;UBERON:0002390,2.06e-09,98;UBERON:0003061,2.06e-09,98;UBERON:0002619,3.76e-09,22;UBERON:0002193,7.33e-09,108;UBERON:0000956,7.84e-09,25;UBERON:0000203,7.84e-09,25;UBERON:0001950,2.32e-08,20;UBERON:0010371,3.05e-08,104;UBERON:0010314,6.00e-07,132 | |||
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| ||
|short_description=p2@RNF130 | |||
}} | }} |
Latest revision as of 10:13, 17 September 2015
Short description: | p2@RNF130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF130_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520911, ENST00000521389, NM_018434, uc003mll.1, uc003mlm.1_5end |
EntrezGene: | RNF130 |
HGNC: | 18280 |
UniProt: | Q86XS8Q59EL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.33e-22 | 108 |
common myeloid progenitor | 4.33e-22 | 108 |
myeloid leukocyte | 2.84e-20 | 72 |
monopoietic cell | 2.65e-19 | 59 |
monocyte | 2.65e-19 | 59 |
monoblast | 2.65e-19 | 59 |
promonocyte | 2.65e-19 | 59 |
granulocyte monocyte progenitor cell | 2.88e-18 | 67 |
myeloid lineage restricted progenitor cell | 6.89e-18 | 66 |
macrophage dendritic cell progenitor | 2.52e-17 | 61 |
defensive cell | 5.03e-16 | 48 |
phagocyte | 5.03e-16 | 48 |
classical monocyte | 1.27e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-12 | 42 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.73e-08 | 31 |