FFCP PHASE1:Hg19::chr1:155292487..155292538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23623 | |EntrezGene=23623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |HGNC=17153 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-264bp_to_ENST00000467820_5end | |association_with_transcript=-264bp_to_ENST00000467820_5end | ||
|cluster_id=chr1:155292487..155292538,+ | |||
|description=CAGE_peak_7_at_RUSC1_5end | |description=CAGE_peak_7_at_RUSC1_5end | ||
|id=chr1:155292487..155292538,+ | |id=chr1:155292487..155292538,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002595;2.10e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,5.33e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000988;1.08e-08;3!UBERON:0003834;2.10e-08;5!UBERON:0001533;2.10e-08;5!UBERON:0002298;2.95e-07;6!UBERON:0002780;4.31e-07;41!UBERON:0001890;4.31e-07;41!UBERON:0000073;4.91e-07;53!UBERON:0002616;4.91e-07;53!UBERON:0004732;4.96e-07;13!UBERON:0003528;6.95e-07;34!UBERON:0002020;6.95e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.47e-13,89;UBERON:0001017,6.58e-13,81;UBERON:0003075,7.51e-13,82;UBERON:0007284,7.51e-13,82;UBERON:0001049,8.39e-13,56;UBERON:0005068,8.39e-13,56;UBERON:0006241,8.39e-13,56;UBERON:0007135,8.39e-13,56;UBERON:0000073,3.46e-12,53;UBERON:0002616,3.46e-12,53;UBERON:0002346,5.75e-12,86;UBERON:0000955,5.76e-12,68;UBERON:0006238,5.76e-12,68;UBERON:0007023,2.43e-11,114;UBERON:0000025,4.33e-10,192;UBERON:0010371,7.36e-09,104;UBERON:0002780,1.61e-08,41;UBERON:0001890,1.61e-08,41;UBERON:0003080,1.61e-08,41;UBERON:0006240,1.61e-08,41;UBERON:0000988,2.09e-08,3;UBERON:0004111,3.72e-08,240;UBERON:0003834,5.33e-08,5;UBERON:0001533,5.33e-08,5;UBERON:0010314,6.71e-08,132;UBERON:0003528,6.86e-08,34;UBERON:0002020,6.86e-08,34;UBERON:0003056,1.20e-07,61;UBERON:0004121,4.25e-07,171;UBERON:0000924,4.25e-07,171;UBERON:0006601,4.25e-07,171;UBERON:0002298,4.91e-07,6;UBERON:0004732,6.67e-07,13;UBERON:0002133,7.26e-07,2 | |||
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| ||
|short_description=p7@RUSC1 | |short_description=p7@RUSC1 | ||
}} | }} |
Latest revision as of 12:36, 17 September 2015
Short description: | p7@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RUSC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -264bp_to_ENST00000467820_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 5.33e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.47e-13 | 89 |
central nervous system | 6.58e-13 | 81 |
neural plate | 7.51e-13 | 82 |
presumptive neural plate | 7.51e-13 | 82 |
neural tube | 8.39e-13 | 56 |
neural rod | 8.39e-13 | 56 |
future spinal cord | 8.39e-13 | 56 |
neural keel | 8.39e-13 | 56 |
regional part of nervous system | 3.46e-12 | 53 |
regional part of brain | 3.46e-12 | 53 |
neurectoderm | 5.75e-12 | 86 |
brain | 5.76e-12 | 68 |
future brain | 5.76e-12 | 68 |
adult organism | 2.43e-11 | 114 |
tube | 4.33e-10 | 192 |
ecto-epithelium | 7.36e-09 | 104 |
regional part of forebrain | 1.61e-08 | 41 |
forebrain | 1.61e-08 | 41 |
anterior neural tube | 1.61e-08 | 41 |
future forebrain | 1.61e-08 | 41 |
pons | 2.09e-08 | 3 |
anatomical conduit | 3.72e-08 | 240 |
thoracic segment blood vessel | 5.33e-08 | 5 |
subclavian artery | 5.33e-08 | 5 |
structure with developmental contribution from neural crest | 6.71e-08 | 132 |
brain grey matter | 6.86e-08 | 34 |
gray matter | 6.86e-08 | 34 |
pre-chordal neural plate | 1.20e-07 | 61 |
ectoderm-derived structure | 4.25e-07 | 171 |
ectoderm | 4.25e-07 | 171 |
presumptive ectoderm | 4.25e-07 | 171 |
brainstem | 4.91e-07 | 6 |
segmental subdivision of nervous system | 6.67e-07 | 13 |
atrioventricular valve | 7.26e-07 | 2 |