FFCP PHASE1:Hg19::chr4:2845547..2845654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118 | |EntrezGene=118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=243 | |HGNC=243 | ||
|TSSclassifier=strong | |||
|UniProt=Q96D30,A2A3N8,P35611,D6RJE2 | |UniProt=Q96D30,A2A3N8,P35611,D6RJE2 | ||
|association_with_transcript=0bp_to_ENST00000264758,ENST00000398124,ENST00000398125,ENST00000446856,ENST00000508684,ENST00000510101,NM_001119,NM_014189,NM_014190,NM_176801,uc003gfn.2,uc003gfo.2,uc003gfp.2,uc003gfq.2,uc003gfr.2,uc010ico.1_5end | |association_with_transcript=0bp_to_ENST00000264758,ENST00000398124,ENST00000398125,ENST00000446856,ENST00000508684,ENST00000510101,NM_001119,NM_014189,NM_014190,NM_176801,uc003gfn.2,uc003gfo.2,uc003gfp.2,uc003gfq.2,uc003gfr.2,uc010ico.1_5end | ||
|cluster_id=chr4:2845547..2845654,+ | |||
|description=CAGE_peak_1_at_ADD1_5end | |description=CAGE_peak_1_at_ADD1_5end | ||
|id=chr4:2845547..2845654,+ | |id=chr4:2845547..2845654,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.73e-36!115;UBERON:0001049!1.82e-23!57;UBERON:0005068!1.82e-23!57;UBERON:0006241!1.82e-23!57;UBERON:0007135!1.82e-23!57;UBERON:0000025!2.61e-21!194;UBERON:0002616!5.71e-21!59;UBERON:0003075!3.14e-20!86;UBERON:0007284!3.14e-20!86;UBERON:0004111!9.20e-19!241;UBERON:0003080!5.13e-18!42;UBERON:0002346!9.54e-18!90;UBERON:0002780!1.52e-17!41;UBERON:0001890!1.52e-17!41;UBERON:0006240!1.52e-17!41;UBERON:0000955!7.01e-17!69;UBERON:0006238!7.01e-17!69;UBERON:0001893!2.38e-16!34;UBERON:0001017!3.33e-16!82;UBERON:0002020!5.72e-16!34;UBERON:0003528!5.72e-16!34;UBERON:0002791!1.03e-15!33;UBERON:0000119!1.13e-15!312;UBERON:0005743!1.24e-15!86;UBERON:0000477!1.55e-15!286;UBERON:0001869!1.81e-15!32;UBERON:0000483!2.60e-15!309;UBERON:0003056!3.40e-15!61;UBERON:0000073!3.35e-14!94;UBERON:0001016!3.35e-14!94;UBERON:0000475!1.02e-13!365;UBERON:0002619!3.33e-13!22;UBERON:0000033!1.50e-12!123;UBERON:0000153!1.92e-12!129;UBERON:0007811!1.92e-12!129;UBERON:0001950!4.37e-12!20;UBERON:0001009!4.71e-12!113;UBERON:0000956!7.97e-12!25;UBERON:0000203!7.97e-12!25;UBERON:0004121!8.70e-12!169;UBERON:0004535!5.30e-11!110;UBERON:0000055!1.09e-10!69;UBERON:0000924!1.32e-10!173;UBERON:0006601!1.32e-10!173;UBERON:0001981!2.58e-10!60;UBERON:0007500!2.58e-10!60;UBERON:0004537!2.58e-10!60;UBERON:0006965!2.58e-10!60;UBERON:0002049!7.21e-10!79;UBERON:0007798!7.21e-10!79;UBERON:0004872!8.72e-10!84;UBERON:0001637!1.82e-08!42;UBERON:0003509!1.82e-08!42;UBERON:0004572!1.82e-08!42;UBERON:0000481!3.35e-08!347;UBERON:0003914!9.64e-08!118;UBERON:0000064!2.78e-07!219 | |ontology_enrichment_uberon=UBERON:0007023!1.73e-36!115;UBERON:0001049!1.82e-23!57;UBERON:0005068!1.82e-23!57;UBERON:0006241!1.82e-23!57;UBERON:0007135!1.82e-23!57;UBERON:0000025!2.61e-21!194;UBERON:0002616!5.71e-21!59;UBERON:0003075!3.14e-20!86;UBERON:0007284!3.14e-20!86;UBERON:0004111!9.20e-19!241;UBERON:0003080!5.13e-18!42;UBERON:0002346!9.54e-18!90;UBERON:0002780!1.52e-17!41;UBERON:0001890!1.52e-17!41;UBERON:0006240!1.52e-17!41;UBERON:0000955!7.01e-17!69;UBERON:0006238!7.01e-17!69;UBERON:0001893!2.38e-16!34;UBERON:0001017!3.33e-16!82;UBERON:0002020!5.72e-16!34;UBERON:0003528!5.72e-16!34;UBERON:0002791!1.03e-15!33;UBERON:0000119!1.13e-15!312;UBERON:0005743!1.24e-15!86;UBERON:0000477!1.55e-15!286;UBERON:0001869!1.81e-15!32;UBERON:0000483!2.60e-15!309;UBERON:0003056!3.40e-15!61;UBERON:0000073!3.35e-14!94;UBERON:0001016!3.35e-14!94;UBERON:0000475!1.02e-13!365;UBERON:0002619!3.33e-13!22;UBERON:0000033!1.50e-12!123;UBERON:0000153!1.92e-12!129;UBERON:0007811!1.92e-12!129;UBERON:0001950!4.37e-12!20;UBERON:0001009!4.71e-12!113;UBERON:0000956!7.97e-12!25;UBERON:0000203!7.97e-12!25;UBERON:0004121!8.70e-12!169;UBERON:0004535!5.30e-11!110;UBERON:0000055!1.09e-10!69;UBERON:0000924!1.32e-10!173;UBERON:0006601!1.32e-10!173;UBERON:0001981!2.58e-10!60;UBERON:0007500!2.58e-10!60;UBERON:0004537!2.58e-10!60;UBERON:0006965!2.58e-10!60;UBERON:0002049!7.21e-10!79;UBERON:0007798!7.21e-10!79;UBERON:0004872!8.72e-10!84;UBERON:0001637!1.82e-08!42;UBERON:0003509!1.82e-08!42;UBERON:0004572!1.82e-08!42;UBERON:0000481!3.35e-08!347;UBERON:0003914!9.64e-08!118;UBERON:0000064!2.78e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.89e-14;34!UBERON:0001869;6.76e-14;32!UBERON:0003528;1.06e-13;34!UBERON:0002020;1.06e-13;34!UBERON:0002791;1.16e-13;32!UBERON:0002619;3.16e-13;22!UBERON:0002780;5.69e-13;41!UBERON:0001890;5.69e-13;41!UBERON:0000073;7.52e-13;53!UBERON:0002616;7.52e-13;53!UBERON:0001950;4.13e-12;20!UBERON:0000956;7.12e-12;25!UBERON:0000203;7.12e-12;25!UBERON:0007023;7.78e-10;114!UBERON:0000955;3.70e-08;68!UBERON:0001017;5.38e-08;75!UBERON:0001016;8.07e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0001893;4.89e-14;34!UBERON:0001869;6.76e-14;32!UBERON:0003528;1.06e-13;34!UBERON:0002020;1.06e-13;34!UBERON:0002791;1.16e-13;32!UBERON:0002619;3.16e-13;22!UBERON:0002780;5.69e-13;41!UBERON:0001890;5.69e-13;41!UBERON:0000073;7.52e-13;53!UBERON:0002616;7.52e-13;53!UBERON:0001950;4.13e-12;20!UBERON:0000956;7.12e-12;25!UBERON:0000203;7.12e-12;25!UBERON:0007023;7.78e-10;114!UBERON:0000955;3.70e-08;68!UBERON:0001017;5.38e-08;75!UBERON:0001016;8.07e-07;83 | ||
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|short_description=p1@ADD1 | |short_description=p1@ADD1 | ||
}} | }} |
Latest revision as of 12:42, 17 September 2015
Short description: | p1@ADD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264758, ENST00000398124, ENST00000398125, ENST00000446856, ENST00000508684, ENST00000510101, NM_001119, NM_014189, NM_014190, NM_176801, uc003gfn.2, uc003gfo.2, uc003gfp.2, uc003gfq.2, uc003gfr.2, uc010ico.1_5end |
EntrezGene: | ADD1 |
HGNC: | 243 |
UniProt: | Q96D30A2A3N8P35611D6RJE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data