FFCP PHASE1:Hg19::chr4:36245956..36245972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116984 | |EntrezGene=116984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |HGNC=16924 | ||
|TSSclassifier=strong | |||
|UniProt=A7E2A5,Q8WZ64 | |UniProt=A7E2A5,Q8WZ64 | ||
|association_with_transcript=6bp_to_NM_015230,uc003gsq.1_5end | |association_with_transcript=6bp_to_NM_015230,uc003gsq.1_5end | ||
|cluster_id=chr4:36245956..36245972,- | |||
|coexpression_cluster_id=C1522 | |coexpression_cluster_id=C1522 | ||
|description=CAGE_peak_6_at_ARAP2_5end | |description=CAGE_peak_6_at_ARAP2_5end | ||
|id=chr4:36245956..36245972,- | |id=chr4:36245956..36245972,- | ||
|ontology_enrichment_celltype=CL:0000738!9.13e-44!140;CL:0002087!1.11e-35!119;CL:0000037!1.59e-35!172;CL:0000566!1.59e-35!172;CL:0002031!1.07e-34!124;CL:0000988!1.20e-33!182;CL:0002032!3.07e-31!165;CL:0000837!3.07e-31!165;CL:0000542!1.84e-25!53;CL:0000051!1.84e-25!53;CL:0000838!2.32e-25!52;CL:0000084!5.15e-14!25;CL:0000827!5.15e-14!25;CL:0000791!3.35e-13!18;CL:0000789!3.35e-13!18;CL:0002420!3.35e-13!18;CL:0002419!3.35e-13!18;CL:0000790!3.35e-13!18;CL:0000766!9.65e-13!76;CL:0000557!1.81e-11!71;CL:0002009!2.32e-11!65;CL:0002057!6.26e-11!42;CL:0000839!1.10e-10!70;CL:0002194!1.77e-10!63;CL:0000576!1.77e-10!63;CL:0000040!1.77e-10!63;CL:0000559!1.77e-10!63;CL:0000860!1.87e-10!45;CL:0000945!2.55e-10!24;CL:0000826!2.55e-10!24;CL:0000763!3.53e-10!112;CL:0000049!3.53e-10!112;CL:0000625!4.33e-09!11;CL:0000451!6.03e-08!10;CL:0000236!1.31e-07!14 | |ontology_enrichment_celltype=CL:0000738!9.13e-44!140;CL:0002087!1.11e-35!119;CL:0000037!1.59e-35!172;CL:0000566!1.59e-35!172;CL:0002031!1.07e-34!124;CL:0000988!1.20e-33!182;CL:0002032!3.07e-31!165;CL:0000837!3.07e-31!165;CL:0000542!1.84e-25!53;CL:0000051!1.84e-25!53;CL:0000838!2.32e-25!52;CL:0000084!5.15e-14!25;CL:0000827!5.15e-14!25;CL:0000791!3.35e-13!18;CL:0000789!3.35e-13!18;CL:0002420!3.35e-13!18;CL:0002419!3.35e-13!18;CL:0000790!3.35e-13!18;CL:0000766!9.65e-13!76;CL:0000557!1.81e-11!71;CL:0002009!2.32e-11!65;CL:0002057!6.26e-11!42;CL:0000839!1.10e-10!70;CL:0002194!1.77e-10!63;CL:0000576!1.77e-10!63;CL:0000040!1.77e-10!63;CL:0000559!1.77e-10!63;CL:0000860!1.87e-10!45;CL:0000945!2.55e-10!24;CL:0000826!2.55e-10!24;CL:0000763!3.53e-10!112;CL:0000049!3.53e-10!112;CL:0000625!4.33e-09!11;CL:0000451!6.03e-08!10;CL:0000236!1.31e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.40e-21;18!CL:0000789;1.40e-21;18!CL:0002419;1.40e-21;18!CL:0000084;2.78e-19;25!CL:0000542;1.45e-15;53!CL:0000625;1.22e-14;11!CL:0000451;3.97e-09;10!CL:0002087;9.20e-09;104!CL:0000236;7.08e-08;13!CL:0000624;8.70e-08;6!CL:0000738;4.03e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.90e-35,136;CL:0000037,2.95e-26,168;CL:0002087,3.64e-26,115;CL:0000838,7.69e-26,52;CL:0000542,4.04e-25,53;CL:0000051,4.04e-25,53;CL:0002031,2.81e-24,120;CL:0000988,9.33e-24,177;CL:0000791,5.51e-22,18;CL:0000789,5.51e-22,18;CL:0002420,5.51e-22,18;CL:0002419,5.51e-22,18;CL:0000790,5.51e-22,18;CL:0002032,4.63e-21,161;CL:0000837,4.63e-21,161;CL:0000084,1.44e-19,25;CL:0000827,1.44e-19,25;CL:0000625,9.12e-15,11;CL:0000451,3.69e-09,10;CL:0000624,6.23e-08,6;CL:0002393,1.35e-07,9;CL:0002397,1.35e-07,9;CL:0000236,2.37e-07,14;CL:0000453,7.07e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.40e-21;18!CL:0000051;1.45e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.11e-23!115;UBERON:0001049!4.61e-19!57;UBERON:0005068!4.61e-19!57;UBERON:0006241!4.61e-19!57;UBERON:0007135!4.61e-19!57;UBERON:0002390!2.87e-16!102;UBERON:0003061!2.87e-16!102;UBERON:0002616!2.76e-14!59;UBERON:0003080!3.44e-14!42;UBERON:0002780!6.86e-14!41;UBERON:0001890!6.86e-14!41;UBERON:0006240!6.86e-14!41;UBERON:0002193!9.88e-14!112;UBERON:0001893!3.72e-13!34;UBERON:0002020!5.79e-13!34;UBERON:0003528!5.79e-13!34;UBERON:0002791!1.68e-12!33;UBERON:0001869!7.01e-12!32;UBERON:0000955!8.43e-12!69;UBERON:0006238!8.43e-12!69;UBERON:0001017!9.25e-12!82;UBERON:0005743!9.20e-11!86;UBERON:0002371!1.68e-09!80;UBERON:0003075!2.25e-09!86;UBERON:0007284!2.25e-09!86;UBERON:0002619!7.25e-09!22;UBERON:0000073!9.25e-09!94;UBERON:0001016!9.25e-09!94;UBERON:0002346!3.40e-08!90;UBERON:0001950!6.60e-08!20;UBERON:0000956!8.84e-08!25;UBERON:0000203!8.84e-08!25;UBERON:0001474!1.07e-07!86;UBERON:0002308!2.55e-07!9;UBERON:0000125!2.55e-07!9;UBERON:0002405!2.96e-07!115;UBERON:0002420!4.81e-07!9;UBERON:0007245!4.81e-07!9;UBERON:0010009!4.81e-07!9;UBERON:0010011!4.81e-07!9;UBERON:0000454!4.81e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.11e-23!115;UBERON:0001049!4.61e-19!57;UBERON:0005068!4.61e-19!57;UBERON:0006241!4.61e-19!57;UBERON:0007135!4.61e-19!57;UBERON:0002390!2.87e-16!102;UBERON:0003061!2.87e-16!102;UBERON:0002616!2.76e-14!59;UBERON:0003080!3.44e-14!42;UBERON:0002780!6.86e-14!41;UBERON:0001890!6.86e-14!41;UBERON:0006240!6.86e-14!41;UBERON:0002193!9.88e-14!112;UBERON:0001893!3.72e-13!34;UBERON:0002020!5.79e-13!34;UBERON:0003528!5.79e-13!34;UBERON:0002791!1.68e-12!33;UBERON:0001869!7.01e-12!32;UBERON:0000955!8.43e-12!69;UBERON:0006238!8.43e-12!69;UBERON:0001017!9.25e-12!82;UBERON:0005743!9.20e-11!86;UBERON:0002371!1.68e-09!80;UBERON:0003075!2.25e-09!86;UBERON:0007284!2.25e-09!86;UBERON:0002619!7.25e-09!22;UBERON:0000073!9.25e-09!94;UBERON:0001016!9.25e-09!94;UBERON:0002346!3.40e-08!90;UBERON:0001950!6.60e-08!20;UBERON:0000956!8.84e-08!25;UBERON:0000203!8.84e-08!25;UBERON:0001474!1.07e-07!86;UBERON:0002308!2.55e-07!9;UBERON:0000125!2.55e-07!9;UBERON:0002405!2.96e-07!115;UBERON:0002420!4.81e-07!9;UBERON:0007245!4.81e-07!9;UBERON:0010009!4.81e-07!9;UBERON:0010011!4.81e-07!9;UBERON:0000454!4.81e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.36e-18;34!UBERON:0003528;1.38e-17;34!UBERON:0002020;1.38e-17;34!UBERON:0001869;3.21e-17;32!UBERON:0002791;3.47e-17;32!UBERON:0002780;1.38e-15;41!UBERON:0001890;1.38e-15;41!UBERON:0002619;2.45e-14;22!UBERON:0000073;7.53e-14;53!UBERON:0002616;7.53e-14;53!UBERON:0001950;9.13e-13;20!UBERON:0000956;4.53e-12;25!UBERON:0000203;4.53e-12;25!UBERON:0000125;1.25e-11;9!UBERON:0002308;1.25e-11;9!UBERON:0009663;9.42e-10;7!UBERON:0002420;3.81e-09;9!UBERON:0007245;3.81e-09;9!UBERON:0010009;3.81e-09;9!UBERON:0010011;3.81e-09;9!UBERON:0000454;3.81e-09;9!UBERON:0001017;2.15e-08;75!UBERON:0000200;5.78e-08;6!UBERON:0002298;6.85e-08;6!UBERON:0000955;2.26e-07;68!UBERON:0001016;8.27e-07;83 | |||
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| ||
|short_description=p6@ARAP2 | |short_description=p6@ARAP2 | ||
}} | }} |
Latest revision as of 14:47, 17 September 2015
Short description: | p6@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARAP2_5end |
Coexpression cluster: | C1522_CD8_Natural_CD4_Basophils_thymus_Peripheral_CD19 |
Association with transcript: | 6bp_to_NM_015230, uc003gsq.1_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | A7E2A5Q8WZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.90e-35 | 136 |
hematopoietic stem cell | 2.95e-26 | 168 |
nongranular leukocyte | 3.64e-26 | 115 |
lymphoid lineage restricted progenitor cell | 7.69e-26 | 52 |
lymphocyte | 4.04e-25 | 53 |
common lymphoid progenitor | 4.04e-25 | 53 |
hematopoietic lineage restricted progenitor cell | 2.81e-24 | 120 |
hematopoietic cell | 9.33e-24 | 177 |
mature alpha-beta T cell | 5.51e-22 | 18 |
alpha-beta T cell | 5.51e-22 | 18 |
immature T cell | 5.51e-22 | 18 |
mature T cell | 5.51e-22 | 18 |
immature alpha-beta T cell | 5.51e-22 | 18 |
hematopoietic oligopotent progenitor cell | 4.63e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.63e-21 | 161 |
T cell | 1.44e-19 | 25 |
pro-T cell | 1.44e-19 | 25 |
CD8-positive, alpha-beta T cell | 9.12e-15 | 11 |
dendritic cell | 3.69e-09 | 10 |
CD4-positive, alpha-beta T cell | 6.23e-08 | 6 |
intermediate monocyte | 1.35e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.35e-07 | 9 |
B cell | 2.37e-07 | 14 |
Langerhans cell | 7.07e-07 | 5 |