FFCP PHASE1:Hg19::chr4:36245956..36245972,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |||
|TSSclassifier=strong | |||
|UniProt=A7E2A5,Q8WZ64 | |||
|association_with_transcript=6bp_to_NM_015230,uc003gsq.1_5end | |||
|cluster_id=chr4:36245956..36245972,- | |||
|coexpression_cluster_id=C1522 | |||
|description=CAGE_peak_6_at_ARAP2_5end | |||
|id=chr4:36245956..36245972,- | |||
|ontology_enrichment_celltype=CL:0000738!9.13e-44!140;CL:0002087!1.11e-35!119;CL:0000037!1.59e-35!172;CL:0000566!1.59e-35!172;CL:0002031!1.07e-34!124;CL:0000988!1.20e-33!182;CL:0002032!3.07e-31!165;CL:0000837!3.07e-31!165;CL:0000542!1.84e-25!53;CL:0000051!1.84e-25!53;CL:0000838!2.32e-25!52;CL:0000084!5.15e-14!25;CL:0000827!5.15e-14!25;CL:0000791!3.35e-13!18;CL:0000789!3.35e-13!18;CL:0002420!3.35e-13!18;CL:0002419!3.35e-13!18;CL:0000790!3.35e-13!18;CL:0000766!9.65e-13!76;CL:0000557!1.81e-11!71;CL:0002009!2.32e-11!65;CL:0002057!6.26e-11!42;CL:0000839!1.10e-10!70;CL:0002194!1.77e-10!63;CL:0000576!1.77e-10!63;CL:0000040!1.77e-10!63;CL:0000559!1.77e-10!63;CL:0000860!1.87e-10!45;CL:0000945!2.55e-10!24;CL:0000826!2.55e-10!24;CL:0000763!3.53e-10!112;CL:0000049!3.53e-10!112;CL:0000625!4.33e-09!11;CL:0000451!6.03e-08!10;CL:0000236!1.31e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.40e-21;18!CL:0000789;1.40e-21;18!CL:0002419;1.40e-21;18!CL:0000084;2.78e-19;25!CL:0000542;1.45e-15;53!CL:0000625;1.22e-14;11!CL:0000451;3.97e-09;10!CL:0002087;9.20e-09;104!CL:0000236;7.08e-08;13!CL:0000624;8.70e-08;6!CL:0000738;4.03e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.90e-35,136;CL:0000037,2.95e-26,168;CL:0002087,3.64e-26,115;CL:0000838,7.69e-26,52;CL:0000542,4.04e-25,53;CL:0000051,4.04e-25,53;CL:0002031,2.81e-24,120;CL:0000988,9.33e-24,177;CL:0000791,5.51e-22,18;CL:0000789,5.51e-22,18;CL:0002420,5.51e-22,18;CL:0002419,5.51e-22,18;CL:0000790,5.51e-22,18;CL:0002032,4.63e-21,161;CL:0000837,4.63e-21,161;CL:0000084,1.44e-19,25;CL:0000827,1.44e-19,25;CL:0000625,9.12e-15,11;CL:0000451,3.69e-09,10;CL:0000624,6.23e-08,6;CL:0002393,1.35e-07,9;CL:0002397,1.35e-07,9;CL:0000236,2.37e-07,14;CL:0000453,7.07e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.40e-21;18!CL:0000051;1.45e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.11e-23!115;UBERON:0001049!4.61e-19!57;UBERON:0005068!4.61e-19!57;UBERON:0006241!4.61e-19!57;UBERON:0007135!4.61e-19!57;UBERON:0002390!2.87e-16!102;UBERON:0003061!2.87e-16!102;UBERON:0002616!2.76e-14!59;UBERON:0003080!3.44e-14!42;UBERON:0002780!6.86e-14!41;UBERON:0001890!6.86e-14!41;UBERON:0006240!6.86e-14!41;UBERON:0002193!9.88e-14!112;UBERON:0001893!3.72e-13!34;UBERON:0002020!5.79e-13!34;UBERON:0003528!5.79e-13!34;UBERON:0002791!1.68e-12!33;UBERON:0001869!7.01e-12!32;UBERON:0000955!8.43e-12!69;UBERON:0006238!8.43e-12!69;UBERON:0001017!9.25e-12!82;UBERON:0005743!9.20e-11!86;UBERON:0002371!1.68e-09!80;UBERON:0003075!2.25e-09!86;UBERON:0007284!2.25e-09!86;UBERON:0002619!7.25e-09!22;UBERON:0000073!9.25e-09!94;UBERON:0001016!9.25e-09!94;UBERON:0002346!3.40e-08!90;UBERON:0001950!6.60e-08!20;UBERON:0000956!8.84e-08!25;UBERON:0000203!8.84e-08!25;UBERON:0001474!1.07e-07!86;UBERON:0002308!2.55e-07!9;UBERON:0000125!2.55e-07!9;UBERON:0002405!2.96e-07!115;UBERON:0002420!4.81e-07!9;UBERON:0007245!4.81e-07!9;UBERON:0010009!4.81e-07!9;UBERON:0010011!4.81e-07!9;UBERON:0000454!4.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.36e-18;34!UBERON:0003528;1.38e-17;34!UBERON:0002020;1.38e-17;34!UBERON:0001869;3.21e-17;32!UBERON:0002791;3.47e-17;32!UBERON:0002780;1.38e-15;41!UBERON:0001890;1.38e-15;41!UBERON:0002619;2.45e-14;22!UBERON:0000073;7.53e-14;53!UBERON:0002616;7.53e-14;53!UBERON:0001950;9.13e-13;20!UBERON:0000956;4.53e-12;25!UBERON:0000203;4.53e-12;25!UBERON:0000125;1.25e-11;9!UBERON:0002308;1.25e-11;9!UBERON:0009663;9.42e-10;7!UBERON:0002420;3.81e-09;9!UBERON:0007245;3.81e-09;9!UBERON:0010009;3.81e-09;9!UBERON:0010011;3.81e-09;9!UBERON:0000454;3.81e-09;9!UBERON:0001017;2.15e-08;75!UBERON:0000200;5.78e-08;6!UBERON:0002298;6.85e-08;6!UBERON:0000955;2.26e-07;68!UBERON:0001016;8.27e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.26e-27,56;UBERON:0005068,2.26e-27,56;UBERON:0006241,2.26e-27,56;UBERON:0007135,2.26e-27,56;UBERON:0000073,1.93e-24,53;UBERON:0002616,1.93e-24,53;UBERON:0001893,1.16e-21,34;UBERON:0002780,1.79e-21,41;UBERON:0001890,1.79e-21,41;UBERON:0003080,1.79e-21,41;UBERON:0006240,1.79e-21,41;UBERON:0003528,2.51e-21,34;UBERON:0002020,2.51e-21,34;UBERON:0007023,3.10e-20,114;UBERON:0002791,1.95e-19,32;UBERON:0001869,1.99e-19,32;UBERON:0000955,1.87e-17,68;UBERON:0006238,1.87e-17,68;UBERON:0001017,6.60e-17,81;UBERON:0003075,5.07e-16,82;UBERON:0007284,5.07e-16,82;UBERON:0001016,3.87e-15,89;UBERON:0002346,1.02e-14,86;UBERON:0002619,1.44e-14,22;UBERON:0001950,6.95e-13,20;UBERON:0003056,9.74e-13,61;UBERON:0000956,2.87e-12,25;UBERON:0000203,2.87e-12,25;UBERON:0000125,1.14e-11,9;UBERON:0002308,1.14e-11,9;UBERON:0010371,7.93e-11,104;UBERON:0002390,8.66e-10,98;UBERON:0003061,8.66e-10,98;UBERON:0009663,1.03e-09,7;UBERON:0002420,3.01e-09,9;UBERON:0007245,3.01e-09,9;UBERON:0010009,3.01e-09,9;UBERON:0010011,3.01e-09,9;UBERON:0000454,3.01e-09,9;UBERON:0000200,3.36e-08,6;UBERON:0002193,5.82e-08,108;UBERON:0002298,7.10e-08,6;UBERON:0003076,4.00e-07,15;UBERON:0003057,4.00e-07,15;UBERON:0004177,5.81e-07,7;UBERON:0005057,5.81e-07,7;UBERON:0002370,9.83e-07,4;UBERON:0005058,9.83e-07,4;UBERON:0009113,9.83e-07,4;UBERON:0003295,9.83e-07,4;UBERON:0005562,9.83e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0,0.305653622991805,0.328402357799783,0.314843125254717,1.18009283054671,3.83829398097213,0.928896739896456,0,0,0,1.54934401160603,0.710846162437108,1.76160263600908,2.76997704265939,1.00272223735071,1.30206522429511,1.34349284543955,1.29557466407592,1.03030227053675,0.145398238779565,0.755751887377619,0,0,0.411167888021826,0.309706370895104,2.01384674625505,2.56160706529101,3.07426898855161,0.344745680736619,0,1.35426486594342,0.376484679085209,0.272906150057846,0.674170453335254,0.918251677112708,0.962787081228281,0.639337125799041,0.989553900560148,2.59302754908121,0.426224750532694,0,1.70215567407342,0.622822248995575,1.00499466102697,2.08593167368081,1.95469960234605,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,1.27562579979026,1.46761051855863,0.786300418025466,0.300353785683013,0,2.56511469367124,0.99458338599545,2.73996230646951,0,4.36910889009705,4.44754626931777,4.26730222566507,0.800791974072025,1.72425731986345,2.64417949113945,1.90810750907073,3.41527781465669,5.28513470433845,3.44045905312706,1.32171328579026,3.36305137788922,1.31692042387539,2.9506465517075,1.57204305099666,5.34563897398724,2.17342444007882,1.95553359980154,0.946895611469467,0,2.1167986808183,1.17842362989935,3.1014745241707,1.89562704635511,1.92136979588513,1.43065282315866,1.47994114143309,1.38175008892924,3.76744011455568,1.18629250529648,1.33770414044857,0,2.49280553934646,3.06576394881537,5.49803912772208,7.08455137654608,2.86708872891687,3.25541726928209,2.85135613334512,2.86092726247768,4.60751800155906,1.24930726552346,3.07810427657222,2.46338399076314,4.43534835094411,4.81392352410313,2.46201486600758,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0,0.392937226493138,0,0,0.97364218096405,1.21890816109487,0.930705723632056,6.20075623193889,4.0039643754609,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,2.20731549707325,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.936017060556951,0.594524649154913,0,0,0.141775097242386,0,0,0,3.94130590316755,0.176096868026452,0,0.288239906833923,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0.502257091432126,0,0,0,0,0,0,0,1.79336230389644,6.69904584686553,4.9594342217689,4.2353201972317,0.254094624222463,0,0,0.167516265334349,0,2.99602809578873,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,1.72571360654893,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.638063562472921,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,1.03558180854457,0,0,0,0.459446800413919,1.01489521846434,1.52927441428475,0.569647187174163,1.19115887728894,1.64544909234478,0,1.08006287447623,1.58625035258854,0,0,0,0.371606350251437,0.577076851905779,2.84567373393656,0.478278818186467,0.399158742865633,0.191505370132367,1.90506224451495,0,0.280797178113459,0.456469358066384,0.313359791546046,0,0.50787533340481,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0.748562161632879,0.146508179271894,0.121360521749513,0,0.284136146806413,0.23874448473769,0.593929361665277,0.614321404198464,0.994147647766298,1.82870241333667,0,0.494411622680279,0,0,1.38141957765574,0,0.306806047506464,0.738508832766417,0,0.269605053441981,0,0,0.394573622547734,0,0,0,3.8034920246359,0,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0,0,0,1.77148277162768,2.05013945663194,1.52581736317083,0.442317039724898,0.886642856860642,1.31631238292384,0,0.557694977114413,0.538651809526579,0,0,0.179515288819544,0,0.31900115973192,0.0915975934018623,0.533034776018635,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0.489698424477443,0,0,0,1.23840590304675,0.611030144933625,0.296521128680622,0.741383633679017,0.835375596043643,2.76344645220776,0,2.34264445725339,0.364909578431332,0.19566461893209,0,0,0,0,0.063186579628488,1.05226393590145,0.103688191397247,0,0,0,0,0,0,0,0,0.435296032902013,0.17472666824203,0,0,0.219267951258557,0.164230914106418,1.26085721434945,0,0.225980740780532,0,0,4.55837730882327,0.195551382734803,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0.235694034616795,0,0.104602846312333,0,0,7.80546375322726,5.20240439789574,0,0.429765441419957,0.525774708558629,0,0,0,0,0,0.22317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| |||
|short_description=p6@ARAP2 | |||
}} |
Latest revision as of 14:47, 17 September 2015
Short description: | p6@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARAP2_5end |
Coexpression cluster: | C1522_CD8_Natural_CD4_Basophils_thymus_Peripheral_CD19 |
Association with transcript: | 6bp_to_NM_015230, uc003gsq.1_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | A7E2A5Q8WZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.90e-35 | 136 |
hematopoietic stem cell | 2.95e-26 | 168 |
nongranular leukocyte | 3.64e-26 | 115 |
lymphoid lineage restricted progenitor cell | 7.69e-26 | 52 |
lymphocyte | 4.04e-25 | 53 |
common lymphoid progenitor | 4.04e-25 | 53 |
hematopoietic lineage restricted progenitor cell | 2.81e-24 | 120 |
hematopoietic cell | 9.33e-24 | 177 |
mature alpha-beta T cell | 5.51e-22 | 18 |
alpha-beta T cell | 5.51e-22 | 18 |
immature T cell | 5.51e-22 | 18 |
mature T cell | 5.51e-22 | 18 |
immature alpha-beta T cell | 5.51e-22 | 18 |
hematopoietic oligopotent progenitor cell | 4.63e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.63e-21 | 161 |
T cell | 1.44e-19 | 25 |
pro-T cell | 1.44e-19 | 25 |
CD8-positive, alpha-beta T cell | 9.12e-15 | 11 |
dendritic cell | 3.69e-09 | 10 |
CD4-positive, alpha-beta T cell | 6.23e-08 | 6 |
intermediate monocyte | 1.35e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.35e-07 | 9 |
B cell | 2.37e-07 | 14 |
Langerhans cell | 7.07e-07 | 5 |