FFCP PHASE1:Hg19::chr3:33482052..33482116,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7342 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12507 | |||
|TSSclassifier=strong | |||
|UniProt=C9JWL3 | |||
|association_with_transcript=0bp_to_ENST00000456378_5end | |||
|cluster_id=chr3:33482052..33482116,- | |||
|description=CAGE_peak_2_at_UBP1_5end | |||
|id=chr3:33482052..33482116,- | |||
|ontology_enrichment_celltype=CL:0000542!7.04e-09!53;CL:0000051!7.04e-09!53;CL:0000838!9.99e-09!52;CL:0000791!2.10e-08!18;CL:0000789!2.10e-08!18;CL:0002420!2.10e-08!18;CL:0002419!2.10e-08!18;CL:0000790!2.10e-08!18;CL:0002139!1.29e-07!24;CL:0000084!3.28e-07!25;CL:0000827!3.28e-07!25;CL:0000115!3.98e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.58e-10;18!CL:0000789;1.58e-10;18!CL:0002419;1.58e-10;18!CL:0002139;3.36e-08;24!CL:0000084;1.25e-07;25!CL:0000625;1.54e-07;11!CL:0000115;8.57e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.60e-10,18;CL:0000789,1.60e-10,18;CL:0002420,1.60e-10,18;CL:0002419,1.60e-10,18;CL:0000790,1.60e-10,18;CL:0000542,2.48e-08,53;CL:0000051,2.48e-08,53;CL:0000838,3.94e-08,52;CL:0002139,4.62e-08,24;CL:0000084,1.35e-07,25;CL:0000827,1.35e-07,25;CL:0000115,1.72e-07,36;CL:0000625,1.86e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.58e-10;18!UBERON:0006601;2.03e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.61e-37!115;UBERON:0000073!8.05e-22!94;UBERON:0001016!8.05e-22!94;UBERON:0001049!3.58e-21!57;UBERON:0005068!3.58e-21!57;UBERON:0006241!3.58e-21!57;UBERON:0007135!3.58e-21!57;UBERON:0005743!5.15e-21!86;UBERON:0001017!1.00e-20!82;UBERON:0003080!4.64e-19!42;UBERON:0002780!5.61e-19!41;UBERON:0001890!5.61e-19!41;UBERON:0006240!5.61e-19!41;UBERON:0002346!1.06e-17!90;UBERON:0001869!1.07e-17!32;UBERON:0001893!2.18e-17!34;UBERON:0002020!3.93e-17!34;UBERON:0003528!3.93e-17!34;UBERON:0002616!5.96e-17!59;UBERON:0002791!9.30e-17!33;UBERON:0000955!4.88e-16!69;UBERON:0006238!4.88e-16!69;UBERON:0003075!6.23e-16!86;UBERON:0007284!6.23e-16!86;UBERON:0002619!1.04e-14!22;UBERON:0000956!4.41e-14!25;UBERON:0000203!4.41e-14!25;UBERON:0001950!1.38e-13!20;UBERON:0003056!3.28e-13!61;UBERON:0000924!3.92e-09!173;UBERON:0006601!3.92e-09!173;UBERON:0000153!1.81e-08!129;UBERON:0007811!1.81e-08!129;UBERON:0004121!4.99e-08!169;UBERON:0000033!4.46e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.21e-20;32!UBERON:0002619;6.59e-20;22!UBERON:0001893;6.70e-19;34!UBERON:0002791;9.85e-19;32!UBERON:0003528;1.13e-18;34!UBERON:0002020;1.13e-18;34!UBERON:0001950;2.12e-18;20!UBERON:0000956;1.59e-17;25!UBERON:0000203;1.59e-17;25!UBERON:0002780;6.98e-17;41!UBERON:0001890;6.98e-17;41!UBERON:0000073;9.31e-14;53!UBERON:0002616;9.31e-14;53!UBERON:0007023;4.98e-12;114!UBERON:0000955;3.70e-10;68!UBERON:0001017;1.73e-09;75!UBERON:0001016;7.42e-09;83!UBERON:0000922;1.12e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.14e-43,114;UBERON:0001017,5.55e-25,81;UBERON:0001016,1.19e-24,89;UBERON:0000073,1.29e-24,53;UBERON:0002616,1.29e-24,53;UBERON:0001049,1.45e-24,56;UBERON:0005068,1.45e-24,56;UBERON:0006241,1.45e-24,56;UBERON:0007135,1.45e-24,56;UBERON:0002780,2.20e-23,41;UBERON:0001890,2.20e-23,41;UBERON:0003080,2.20e-23,41;UBERON:0006240,2.20e-23,41;UBERON:0001869,1.77e-22,32;UBERON:0001893,1.05e-21,34;UBERON:0003528,2.31e-21,34;UBERON:0002020,2.31e-21,34;UBERON:0002791,1.57e-20,32;UBERON:0002346,2.86e-20,86;UBERON:0000955,7.68e-20,68;UBERON:0006238,7.68e-20,68;UBERON:0002619,7.99e-20,22;UBERON:0001950,2.91e-18,20;UBERON:0003075,6.18e-18,82;UBERON:0007284,6.18e-18,82;UBERON:0000956,1.80e-17,25;UBERON:0000203,1.80e-17,25;UBERON:0003056,6.60e-16,61;UBERON:0010371,2.77e-11,104;UBERON:0004121,6.22e-10,171;UBERON:0000924,6.22e-10,171;UBERON:0006601,6.22e-10,171;UBERON:0010314,5.30e-09,132;UBERON:0011216,1.94e-08,223;UBERON:0000025,2.54e-07,192 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.263766978228454,0.74259811776028,0,1.34465029290355,0,0.730310090387373,0,0.984968464614303,0.204000691244253,0.940364164434263,0.85870796139317,1.50561867580173,0.502170558379211,0.458480434487708,0.738905305049512,0.550975469195755,0.786728553697808,1.53531759238885,0.77408061658038,0,0.30120591877825,0,1.31694240986513,0.568676929949686,5.87200878669694,1.10799081706375,1.60435557976113,1.73608696572681,0.223915474239924,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0,1.21079900526674,0,0,0.422510572623884,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,3.27683166757279,1.77901850772711,3.84057200309856,4.80475184443215,2.29900975981793,3.30522436392431,2.86216126360609,1.70763890732835,1.17447437874188,1.91136614062614,1.32171328579026,5.04457706683382,2.63384084775077,8.45852011489482,12.9693551707224,8.8408644569789,0.668745981562712,6.51844533267181,4.73447805734733,5.84480185223734,0.779873198196215,2.65145316727353,1.99380505125259,1.62482318259009,1.66518715643378,1.69077151827842,1.15106533222573,1.65810010671509,0.579606171470105,5.33831627383417,4.28065324943541,1.04535523804977,0.679856056185397,4.98186641682498,5.49803912772208,2.53019692019503,4.45991580053735,4.55758417699493,2.85135613334512,7.67933107296641,9.21503600311812,1.24930726552346,5.44587679701239,2.46338399076314,6.24980903996671,4.01160293675261,7.38604459802275,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.869079113764942,0,1.45990461090791,0.945348171640679,1.33037638477538,1.05401742831751,4.71524671791765,0.364295288292542,0,0,0.174129737299267,0.132957960518865,5.48528435902286,3.43196946468077,6.3147775226026,1.39133685156694,4.30117297553062,2.77712401286075,2.82653970962005,2.51699661725944,1.10047216776027,1.67195973229448,4.90991842421725,5.69226020298736,6.6944122552934,0.805658634218294,0.760272105718513,5.12530320851156,2.20597848207521,2.43042584364528,4.73288559905623,4.4905874525234,4.50445921933289,3.06633274931766,3.79706263827252,3.29763139074733,0,0,0,0,0.25326102332916,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0.622422070799533,0.808264032418128,0,0,0,0.70296429550139,0,1.1409436430889,0,1.64408298101271,1.13311061057692,0.421352420106746,0,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.336672227908132,0.625592599359821,0,0.438977620880838,0.919463387397059,0.150238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0,0.600182192168805,0.103052529238439,0,0,0.337552664482532,0.292311015483596,0,0.184099797284599,0,0.355009592516614,0.503760491138201,0.169560592310488,0.386521706326594,0.272746120590835,0,6.46460642486856,6.36142887943129,3.83440011469411,3.21349270547648,2.77552935963191,6.20461510428911,0,0.643240938192885,0,0,0,0.473227200159376,0.505754070234305,0.482022059766964,0.220587945464788,0.217879444092406,0,0,0.588664395376038,0,5.16708818237254,2.80483547606892,0,1.47008711385542,0,0,1.77236972004421,1.7658523976586,0.491953754172454,0.514703430895577,0.219500570817251,0,0.804231779293047,0.462942225792648,0,0,0,0.695582429850461,0.117408694235822,2.02113026865503,0.925971025153221,2.47330397904978,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.895585227028483,0,0,0,1.05658120815871,2.69526550203004,3.31475892859011,2.14612136824846,0.317489471460845,0,0,1.71072446022705,0.719792448923265,0.300343057843917,0.285826432630578,0.672786506072164,0.87192013766656,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,1.02738161275192,0.537182889719687,0.560425719967636,5.91092280605782,5.17506179662842,5.00537841491019,0.76228387266739,1.30139853857622,5.41302168944387,9.71594338939223,11.4828975297569,0.749007023947182,0,0.828831026872071,0.36807447515742,0.500170521059677,0.542530047399471,0.415941723061614,0,0.157702415033935,0.117141414992713,1.20378439891088,2.27407504055985,1.03473071292505,0.664225598535437,0.368738337083406,0.347534457872331,0.195801157462741,0.686286847621712,7.03011288817817,8.41285383192606,5.33637789017222,0,0,0.30239029332968,0.496215615637554,0,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.462629081407967,0,0.246381468041427,1.03850885836724,0.464841513839837,0.604297247958111,0,0.184161977871793,0,0.364182336013434,0.262248829918848,0.451199612907412,0.15403067420883,0.784349769176855,0,0.211103257785751,3.4120015221269,1.53084334748864,2.37507507712353,7.71136263451447,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0.671624264166535,0.657779629937804,0.522870902049801,0.256450125116389,0.984043937099117,2.60302715731442,1.44257416306811,0.0915694648183434,0.577566499444116,0,0,0,0.870036464629098,0.462145851343933,0.307007349452259,0.689182862422653,0.751941714077915,1.30515024522806,0.681813019328807,0.801288320820636,0.991709492165869,0.192190067365106,0.510450849978337,0.30347334256665,0,0.94443704049192,0,0,0,0,0,0.715624433709956,0.372158369359667,0.316379424718726,0,0.255897791311334,0.855877976067841,0.636406495851874,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0.211107635297664,0,0,0.349934720244983,0.673554789078584,0,0,1.22386941009813,0,0,0,0.229723400206959,4.05958087385735,5.35246044999663,5.12682468456746,7.86164859010704,4.93634727703433,3.24236655596359,4.86028293514303,5.55187623405989,0.640944426764839,6.73735898684351,0.490080431962063,1.48642540100575,1.44269212976445,0.640276590135727,2.71024663638998,0.997896857164083,0.383010740264733,1.48171507906718,0.324621940274555,1.96558024679421,1.59764275323235,0.47003968731907,5.01268954180134,0.677167111206413,1.4452926759333,0.605399121573143,0.425846237690326,0,0,0.447352215784832,0.500547425135725,0.19538809540204,0.278406173895242,1.23087398947712,0.540911356951966,0.99921590399346,7.04935025439248,0.37428108081644,1.17206543417515,0.970884173996107,0.557216921387392,0,0,0,0.307160702099232,11.9297717731956,9.14351206668333,0.222617410045812,0.16480387422676,4.64475897881586,2.98871982376605,8.56480138146558,0.755798243562828,0.306806047506464,0.615424027305347,0,0.179736702294654,0,0.511572370226872,0.986434056369336,9.57932369387759,0,15.5093239375235,8.34912883456661,19.9613798001194,0,0.437299999980979,1.44999915086959,0.1137934482855,0,0.236387681767936,0.344743373241465,5.54048765428183,2.77799991893268,6.20018970069687,14.9539583895506,7.62908681585416,11.0579259931225,13.0040952339561,7.67848890038904,0.21787692703798,0.697118721393016,3.61666214967846,0.683652335082007,0.69169171316418,0.448788222048861,0.325942115766024,0.31900115973192,0.183195186803725,0.533034776018635,2.04386596391473,0.470940769185074,1.32969345520125,0.676786981851542,0.784250137270958,0.335643173951685,0.189753732724185,1.43042921082341,0.210998064528027,0,0.141353071433941,0.216388639742091,2.98578579323551,1.76915129006678,1.83309043480088,0,0.123563938946503,0,2.42644078730437,4.81546588379273,5.3880822516828,0.729819156862664,0.391329237864179,0,1.97292201424695,1.20990716048664,18.6704384594599,2.84339608328196,1.35291077473043,0.622129148383483,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0.520679215005393,0.0979923974143777,0.0870592065804026,1.7472666824203,0.687944129886466,0.19351266257817,0.65780385377567,0.492692742319255,1.16386819786103,1.3238419003725,4.29363407483012,0.685209623233754,0.993573058514948,10.1930381488965,0.195551382734803,0.160317640503067,2.56143593687223,0.39961921916426,0,0.687219576995494,0.857974989309823,0.864328787928898,0.248505071130865,0.471388069233591,0.407712618220842,0,0.101998217636322,0,4.20294202096853,1.9166753044879,6.38732940334862,0,0.525774708558629,1.39641200636127,3.43740636017525,5.0251111720377,0.599037001496973,3.004582336956,1.78537165953498,2.95607278941596,0.360299883542404,9.31967596219631,0.551482276150566,0.494495150286999,0.404421263125109,0,0.76205998859206,11.1332156573302,5.99294986890933,9.80594205636617,10.3154577447925,9.55512777467126,0,0.77380195455795,12.0284122182889,0.335434687599266,0.394028536495991,2.8325477592899,0.422401346077626,0.35857467866569,0.383830394638891,2.1440859791201,3.31045985182716,0.76280561296425,0,0,0,1.19730191562487,0.82092520749339,0.340776043570843,0.679872549120754,0.439656701034247,5.30027555648885,3.87848869084652,2.51241943311111,0,0,1.06787412567695,2.82967749179399,8.28478110694391,8.93098839261511,0.395223263795889,0.121792598380896,0,0.544017803369474,0.5013797880454,0.306345576763462,0.655745261419609,0.628216385000937,7.08854543973589,8.41981227823546,7.13588305027049,0,2.3295100822739,3.35320575883471,1.798532254171,0.74988244777264,0.151649117541648,0.856396000634902,0.235265819698172,0.468334905806882,2.02889440055155,0,0,0,0.189403005275089,0,0,0.228840068396924,0.453692771289717,0,0.295710299979268,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0.385239660814607,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0.358177682162975,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0.76872455576384,0.345430341731199,0,7.32769711604173,0.194860308839388,0,0.163565394255844,0,0.983091635014877,0.422624246717254,0.39997479170986,0.640150378164845,0,0,0.184105950251841,0,0,1.66262682694747,1.50954735955355,2.35898912783845,0.764467467344097,1.86705782949428,16.3682688478296,14.5004844183033,8.37967376959866,0.636008701306837,0.157723490002507,0,0.352675943690684,0,12.6531573440025,7.08482881627925,8.77986224814332,14.5632618610936,25.963384710837,12.9324062108087,15.8246132719214,2.85538840518309,0.294443155503077,0.11796972334774,0.183428598521679,0.231051332300676,0.381382095467167,0,0.397832444232549,3.23404411901806,0.40341013740704,2.34454203369928,0.785720083444267,0,0.147856086217045,11.2787766312719,5.46754669029693,9.30090584255328,11.0977667839337,14.7683198434919,0,5.45832296228224,6.8589785300252,0.255524855279191,3.21421101526972,6.38939072215766,0.606965604236632,2.27662191351298,1.24183318227694,0.576169937778896,0,5.09772997326238,11.5760081470614,0.236387681767936,0.778619813244484,2.04082041411336,15.2402122218522,0.840816489941367,6.39211104356647,0,0,3.4308741204795,1.10609528212909,1.04617282831313,0.173858272302579,1.60342272946051,0.207216164163037,0.51215543128185,0,0.860454717640555,0.236664001461131,0.596493833314104,1.69354820076372,0.68732060563215,0,0,0.223710863595585,0,0.121917924982269,0.647428837187895,0.821302454849976,1.1598144313382,4.85710993059139,0.467878926924211,1.98950775161368,1.30812099855325,0.5647304101948,0.549702583727146,0.905777061400041,1.23478652972711,2.62271472604749,0,2.20633489578515,0.471353094203252,1.17785080268967,0.891139200981258,5.4945244585842,0.339854229375634,3.10146929333517,5.02771526193902,0.399764623699716,0.178553938605658,0,0.320965466756673,2.92134555298607,2.75237570042724,0.430018749454354,0.315543124386369,10.5386809795918,21.3811838266785,2.645134202577,0.743990036333503,0.462175628631418,0,4.41582486922776,2.73163929909239,1.77377901416012,3.67159787071134,3.47382626845229,0.827054095813604,2.25636785363138,3.18270532516606,6.43113912374828,2.48750831837634,1.86179392551411,2.98527574661373,4.76128862927481,19.3120840409658,13.4702130022012,0.672791175483681,0.954707374172474,5.2550469129137,1.95945073107265,2.05339980651169,3.90641907484608,1.43444410785353,1.99596213927608,0.325613074443898,0.533636729388577,1.9307228228694,0.269475606319761,0,6.72327943005765,2.03448089157869,4.66029741929859,5.43439242695771,0 | |||
|short_description=p2@UBP1 | |||
}} |
Latest revision as of 00:21, 18 September 2015
Short description: | p2@UBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000456378_5end |
EntrezGene: | UBP1 |
HGNC: | 12507 |
UniProt: | C9JWL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.60e-10 | 18 |
alpha-beta T cell | 1.60e-10 | 18 |
immature T cell | 1.60e-10 | 18 |
mature T cell | 1.60e-10 | 18 |
immature alpha-beta T cell | 1.60e-10 | 18 |
lymphocyte | 2.48e-08 | 53 |
common lymphoid progenitor | 2.48e-08 | 53 |
lymphoid lineage restricted progenitor cell | 3.94e-08 | 52 |
endothelial cell of vascular tree | 4.62e-08 | 24 |
T cell | 1.35e-07 | 25 |
pro-T cell | 1.35e-07 | 25 |
endothelial cell | 1.72e-07 | 36 |
CD8-positive, alpha-beta T cell | 1.86e-07 | 11 |