FFCP PHASE1:Hg19::chr2:65454863..65454889,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:65454863..65454889,+
|short_description=p3@ACTR2
|description=CAGE_peak_3_at_ACTR2_5end
|association_with_transcript=0bp_to_ENST00000260641_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10097 | |EntrezGene=10097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=169 | |HGNC=169 | ||
|TSSclassifier=strong | |||
|UniProt=P61160 | |UniProt=P61160 | ||
|association_with_transcript=0bp_to_ENST00000260641_5end | |||
|cluster_id=chr2:65454863..65454889,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_ACTR2_5end | |||
|id=chr2:65454863..65454889,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.93e-24!57;UBERON:0005068!4.93e-24!57;UBERON:0006241!4.93e-24!57;UBERON:0007135!4.93e-24!57;UBERON:0002780!1.57e-20!41;UBERON:0001890!1.57e-20!41;UBERON:0006240!1.57e-20!41;UBERON:0002616!2.34e-20!59;UBERON:0003080!4.27e-19!42;UBERON:0003075!1.90e-18!86;UBERON:0007284!1.90e-18!86;UBERON:0001017!1.04e-17!82;UBERON:0000955!1.12e-17!69;UBERON:0006238!1.12e-17!69;UBERON:0002346!2.33e-17!90;UBERON:0000073!2.61e-17!94;UBERON:0001016!2.61e-17!94;UBERON:0002020!6.34e-17!34;UBERON:0003528!6.34e-17!34;UBERON:0005743!6.40e-17!86;UBERON:0001893!1.67e-16!34;UBERON:0001869!2.59e-16!32;UBERON:0002791!7.13e-16!33;UBERON:0003056!3.23e-15!61;UBERON:0000033!4.56e-14!123;UBERON:0002619!4.82e-14!22;UBERON:0000153!3.09e-13!129;UBERON:0007811!3.09e-13!129;UBERON:0001950!8.91e-13!20;UBERON:0000956!1.23e-12!25;UBERON:0000203!1.23e-12!25;UBERON:0007023!3.42e-12!115;UBERON:0004121!7.15e-11!169;UBERON:0000924!1.84e-10!173;UBERON:0006601!1.84e-10!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.91e-15;41!UBERON:0001890;4.91e-15;41!UBERON:0003528;7.33e-15;34!UBERON:0002020;7.33e-15;34!UBERON:0001869;7.82e-15;32!UBERON:0002791;2.17e-14;32!UBERON:0002619;2.46e-14;22!UBERON:0001893;2.50e-14;34!UBERON:0000073;6.56e-14;53!UBERON:0002616;6.56e-14;53!UBERON:0001950;5.18e-13;20!UBERON:0000956;1.38e-12;25!UBERON:0000203;1.38e-12;25!UBERON:0001017;1.03e-08;75!UBERON:0000955;1.06e-08;68!UBERON:0001016;3.02e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.80e-25,56;UBERON:0005068,1.80e-25,56;UBERON:0006241,1.80e-25,56;UBERON:0007135,1.80e-25,56;UBERON:0000073,1.12e-23,53;UBERON:0002616,1.12e-23,53;UBERON:0002780,1.41e-20,41;UBERON:0001890,1.41e-20,41;UBERON:0003080,1.41e-20,41;UBERON:0006240,1.41e-20,41;UBERON:0003075,6.28e-19,82;UBERON:0007284,6.28e-19,82;UBERON:0001016,7.74e-19,89;UBERON:0000955,1.03e-18,68;UBERON:0006238,1.03e-18,68;UBERON:0001017,1.52e-18,81;UBERON:0002346,9.04e-18,86;UBERON:0003528,5.84e-17,34;UBERON:0002020,5.84e-17,34;UBERON:0003056,9.75e-17,61;UBERON:0001893,1.54e-16,34;UBERON:0001869,2.39e-16,32;UBERON:0002791,1.06e-15,32;UBERON:0010371,4.56e-15,104;UBERON:0010314,1.05e-14,132;UBERON:0002619,4.50e-14,22;UBERON:0001950,8.39e-13,20;UBERON:0000956,1.16e-12,25;UBERON:0000203,1.16e-12,25;UBERON:0007023,1.15e-11,114;UBERON:0004121,9.96e-11,171;UBERON:0000924,9.96e-11,171;UBERON:0006601,9.96e-11,171 | |||
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| ||
|short_description=p3@ACTR2 | |||
}} | }} |
Latest revision as of 00:40, 18 September 2015
Short description: | p3@ACTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACTR2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000260641_5end |
EntrezGene: | ACTR2 |
HGNC: | 169 |
UniProt: | P61160 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.80e-25 | 56 |
neural rod | 1.80e-25 | 56 |
future spinal cord | 1.80e-25 | 56 |
neural keel | 1.80e-25 | 56 |
regional part of nervous system | 1.12e-23 | 53 |
regional part of brain | 1.12e-23 | 53 |
regional part of forebrain | 1.41e-20 | 41 |
forebrain | 1.41e-20 | 41 |
anterior neural tube | 1.41e-20 | 41 |
future forebrain | 1.41e-20 | 41 |
neural plate | 6.28e-19 | 82 |
presumptive neural plate | 6.28e-19 | 82 |
nervous system | 7.74e-19 | 89 |
brain | 1.03e-18 | 68 |
future brain | 1.03e-18 | 68 |
central nervous system | 1.52e-18 | 81 |
neurectoderm | 9.04e-18 | 86 |
brain grey matter | 5.84e-17 | 34 |
gray matter | 5.84e-17 | 34 |
pre-chordal neural plate | 9.75e-17 | 61 |
telencephalon | 1.54e-16 | 34 |
cerebral hemisphere | 2.39e-16 | 32 |
regional part of telencephalon | 1.06e-15 | 32 |
ecto-epithelium | 4.56e-15 | 104 |
structure with developmental contribution from neural crest | 1.05e-14 | 132 |
regional part of cerebral cortex | 4.50e-14 | 22 |
neocortex | 8.39e-13 | 20 |
cerebral cortex | 1.16e-12 | 25 |
pallium | 1.16e-12 | 25 |
adult organism | 1.15e-11 | 114 |
ectoderm-derived structure | 9.96e-11 | 171 |
ectoderm | 9.96e-11 | 171 |
presumptive ectoderm | 9.96e-11 | 171 |