FFCP PHASE1:Hg19::chr1:40782976..40782993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1298 | |EntrezGene=1298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2218 | |HGNC=2218 | ||
|TSSclassifier=strong | |||
|UniProt=Q14055 | |UniProt=Q14055 | ||
|association_with_transcript=0bp_to_uc001cfh.1_5end | |association_with_transcript=0bp_to_uc001cfh.1_5end | ||
|cluster_id=chr1:40782976..40782993,- | |||
|coexpression_cluster_id=C3981 | |coexpression_cluster_id=C3981 | ||
|description=CAGE_peak_5_at_COL9A2_5end | |description=CAGE_peak_5_at_COL9A2_5end | ||
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|ontology_enrichment_celltype=CL:0002319!1.09e-09!25;CL:0000047!7.44e-09!8;CL:1000507!1.22e-07!12;CL:1000494!1.22e-07!12;CL:0000128!2.39e-07!7;CL:0000126!2.39e-07!7;CL:0000127!2.39e-07!7;CL:0002453!2.39e-07!7 | |ontology_enrichment_celltype=CL:0002319!1.09e-09!25;CL:0000047!7.44e-09!8;CL:1000507!1.22e-07!12;CL:1000494!1.22e-07!12;CL:0000128!2.39e-07!7;CL:0000126!2.39e-07!7;CL:0000127!2.39e-07!7;CL:0002453!2.39e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.87e-19;7!CL:0000126;1.87e-19;7!CL:0000127;1.87e-19;7!CL:0000064;8.74e-13;3!CL:0000067;8.74e-13;3!CL:0005012;8.74e-13;3!CL:0002304;8.74e-13;3!CL:0002603;2.16e-12;3!CL:0002319;2.39e-12;25!CL:0002586;2.92e-12;3!CL:0002605;3.67e-12;3!CL:0000095;6.55e-12;17!CL:0000149;2.67e-09;4!CL:0000123;3.64e-09;2!CL:0000242;3.64e-09;2!CL:0000147;5.89e-09;14!CL:0000047;2.33e-08;2!CL:0000243;1.34e-07;15!CL:0000125;1.34e-07;15 | |ontology_enrichment_celltype_v019=CL:0000128;1.87e-19;7!CL:0000126;1.87e-19;7!CL:0000127;1.87e-19;7!CL:0000064;8.74e-13;3!CL:0000067;8.74e-13;3!CL:0005012;8.74e-13;3!CL:0002304;8.74e-13;3!CL:0002603;2.16e-12;3!CL:0002319;2.39e-12;25!CL:0002586;2.92e-12;3!CL:0002605;3.67e-12;3!CL:0000095;6.55e-12;17!CL:0000149;2.67e-09;4!CL:0000123;3.64e-09;2!CL:0000242;3.64e-09;2!CL:0000147;5.89e-09;14!CL:0000047;2.33e-08;2!CL:0000243;1.34e-07;15!CL:0000125;1.34e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.37e-19,7;CL:0000126,1.37e-19,7;CL:0000127,1.37e-19,7;CL:0002453,1.37e-19,7;CL:0000064,7.82e-13,3;CL:0000067,7.82e-13,3;CL:0005012,7.82e-13,3;CL:0002304,7.82e-13,3;CL:0002603,1.51e-12,3;CL:0002319,2.13e-12,25;CL:0000133,2.63e-12,59;CL:0002586,3.36e-12,3;CL:0002605,3.62e-12,3;CL:0000095,5.63e-12,17;CL:0000123,5.63e-12,17;CL:0000221,1.73e-09,72;CL:0000149,2.96e-09,4;CL:0000242,3.58e-09,2;CL:0000147,7.48e-09,14;CL:0000333,1.58e-08,41;CL:0000243,1.19e-07,15;CL:0000125,1.19e-07,15;CL:0000030,1.19e-07,15;CL:0000339,1.19e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;1.34e-07;15 | |ontology_enrichment_development_v019=CL:0000339;1.34e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.15e-39!86;UBERON:0000073!2.02e-38!94;UBERON:0001016!2.02e-38!94;UBERON:0003075!8.92e-36!86;UBERON:0007284!8.92e-36!86;UBERON:0001049!3.32e-35!57;UBERON:0005068!3.32e-35!57;UBERON:0006241!3.32e-35!57;UBERON:0007135!3.32e-35!57;UBERON:0001017!1.09e-34!82;UBERON:0002346!3.15e-33!90;UBERON:0002616!1.02e-29!59;UBERON:0003056!2.54e-26!61;UBERON:0004121!1.97e-25!169;UBERON:0000955!2.62e-25!69;UBERON:0006238!2.62e-25!69;UBERON:0000924!3.08e-24!173;UBERON:0006601!3.08e-24!173;UBERON:0002780!1.72e-23!41;UBERON:0001890!1.72e-23!41;UBERON:0006240!1.72e-23!41;UBERON:0003080!1.16e-22!42;UBERON:0007023!1.88e-22!115;UBERON:0000153!2.23e-21!129;UBERON:0007811!2.23e-21!129;UBERON:0001893!3.43e-20!34;UBERON:0002020!3.93e-20!34;UBERON:0003528!3.93e-20!34;UBERON:0000033!4.50e-20!123;UBERON:0002791!2.90e-19!33;UBERON:0001869!4.17e-18!32;UBERON:0000483!8.12e-16!309;UBERON:0000119!2.27e-15!312;UBERON:0000064!4.12e-15!219;UBERON:0000025!1.29e-14!194;UBERON:0000956!4.15e-14!25;UBERON:0000203!4.15e-14!25;UBERON:0003076!5.47e-14!15;UBERON:0003057!5.47e-14!15;UBERON:0000477!1.60e-12!286;UBERON:0000481!2.00e-12!347;UBERON:0000475!2.00e-12!365;UBERON:0004732!2.87e-12!13;UBERON:0004111!4.86e-12!241;UBERON:0001950!3.91e-11!20;UBERON:0004733!4.45e-11!12;UBERON:0002028!4.45e-11!12;UBERON:0007277!4.45e-11!12;UBERON:0002619!4.61e-11!22;UBERON:0000489!1.46e-10!32;UBERON:0000922!1.49e-10!612;UBERON:0007625!2.86e-09!11;UBERON:0002680!2.66e-08!9;UBERON:0001895!2.66e-08!9;UBERON:0010092!2.66e-08!9;UBERON:0002050!2.97e-08!605;UBERON:0005423!2.97e-08!605;UBERON:0000080!4.50e-08!18;UBERON:0002120!4.50e-08!18;UBERON:0004875!4.50e-08!18;UBERON:0005721!4.50e-08!18;UBERON:0005754!4.50e-08!18;UBERON:0007297!4.50e-08!18;UBERON:0000923!6.10e-08!604;UBERON:0005291!6.10e-08!604;UBERON:0006598!6.10e-08!604;UBERON:0002532!6.10e-08!604;UBERON:0009773!1.22e-07!12;UBERON:0001231!1.22e-07!12;UBERON:0004810!1.22e-07!12;UBERON:0002308!1.37e-07!9;UBERON:0000125!1.37e-07!9;UBERON:0000468!1.78e-07!659;UBERON:0003887!2.52e-07!21;UBERON:0000058!2.60e-07!26;UBERON:0002298!2.61e-07!8;UBERON:0002113!2.62e-07!27;UBERON:0003918!2.62e-07!27;UBERON:0005095!2.62e-07!27;UBERON:0007687!2.62e-07!27;UBERON:0002104!3.35e-07!21;UBERON:0006555!4.00e-07!17;UBERON:0005103!4.00e-07!17;UBERON:0000083!4.00e-07!17;UBERON:0009201!4.00e-07!17;UBERON:0004819!4.00e-07!17;UBERON:0006553!4.00e-07!17;UBERON:0003074!4.00e-07!17;UBERON:0003060!4.00e-07!17;UBERON:0000062!6.00e-07!511;UBERON:0004876!6.48e-07!20;UBERON:0001032!7.65e-07!24;UBERON:0004456!7.65e-07!24 | 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| ||
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| ||
|short_description=p5@COL9A2 | |short_description=p5@COL9A2 | ||
}} | }} |
Latest revision as of 01:11, 18 September 2015
Short description: | p5@COL9A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_COL9A2_5end |
Coexpression cluster: | C3981_Astrocyte_trachea_Chondrocyte_Ciliary_retina_Retinal_merkel |
Association with transcript: | 0bp_to_uc001cfh.1_5end |
EntrezGene: | COL9A2 |
HGNC: | 2218 |
UniProt: | Q14055 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.37e-19 | 7 |
macroglial cell | 1.37e-19 | 7 |
astrocyte | 1.37e-19 | 7 |
oligodendrocyte precursor cell | 1.37e-19 | 7 |
ciliated cell | 7.82e-13 | 3 |
ciliated epithelial cell | 7.82e-13 | 3 |
multi-ciliated epithelial cell | 7.82e-13 | 3 |
non-pigmented ciliary epithelial cell | 7.82e-13 | 3 |
astrocyte of the cerebellum | 1.51e-12 | 3 |
neural cell | 2.13e-12 | 25 |
neurectodermal cell | 2.63e-12 | 59 |
retinal pigment epithelial cell | 3.36e-12 | 3 |
astrocyte of the cerebral cortex | 3.62e-12 | 3 |
neuron associated cell | 5.63e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 5.63e-12 | 17 |
ectodermal cell | 1.73e-09 | 72 |
visual pigment cell | 2.96e-09 | 4 |
Merkel cell | 3.58e-09 | 2 |
pigment cell | 7.48e-09 | 14 |
migratory neural crest cell | 1.58e-08 | 41 |
glial cell (sensu Vertebrata) | 1.19e-07 | 15 |
glial cell | 1.19e-07 | 15 |
glioblast | 1.19e-07 | 15 |
glioblast (sensu Vertebrata) | 1.19e-07 | 15 |