FFCP PHASE1:Hg19::chr19:40854640..40854653,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:40854640..40854653,+
|short_description=p4@PLD3
|description=CAGE_peak_4_at_PLD3_5end
|association_with_transcript=7bp_to_ENST00000409735_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23646 | |EntrezGene=23646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17158 | |HGNC=17158 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV08 | |UniProt=Q8IV08 | ||
|association_with_transcript=7bp_to_ENST00000409735_5end | |||
|cluster_id=chr19:40854640..40854653,+ | |||
|description=CAGE_peak_4_at_PLD3_5end | |||
|id=chr19:40854640..40854653,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.04e-07!43;CL:0000066!2.88e-07!254;CL:0000223!7.02e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.76e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.01e-09,42;CL:0002368,4.92e-07,13;CL:0000223,8.85e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.87e-16!82;UBERON:0000955!3.11e-16!69;UBERON:0006238!3.11e-16!69;UBERON:0001049!8.57e-16!57;UBERON:0005068!8.57e-16!57;UBERON:0006241!8.57e-16!57;UBERON:0007135!8.57e-16!57;UBERON:0002616!2.37e-15!59;UBERON:0005743!2.65e-15!86;UBERON:0000119!8.16e-14!312;UBERON:0000483!1.00e-13!309;UBERON:0000475!3.94e-13!365;UBERON:0000073!5.52e-13!94;UBERON:0001016!5.52e-13!94;UBERON:0003075!1.02e-12!86;UBERON:0007284!1.02e-12!86;UBERON:0002346!2.55e-12!90;UBERON:0000033!4.37e-12!123;UBERON:0004121!8.35e-12!169;UBERON:0002780!8.60e-12!41;UBERON:0001890!8.60e-12!41;UBERON:0006240!8.60e-12!41;UBERON:0000924!1.18e-11!173;UBERON:0006601!1.18e-11!173;UBERON:0000481!1.44e-11!347;UBERON:0000153!4.29e-11!129;UBERON:0007811!4.29e-11!129;UBERON:0003080!6.03e-11!42;UBERON:0000025!7.15e-11!194;UBERON:0004111!7.22e-11!241;UBERON:0000064!1.52e-10!219;UBERON:0001869!1.99e-10!32;UBERON:0003056!5.58e-10!61;UBERON:0002020!7.47e-10!34;UBERON:0003528!7.47e-10!34;UBERON:0001893!2.46e-09!34;UBERON:0000477!3.10e-09!286;UBERON:0002619!5.44e-09!22;UBERON:0000468!7.34e-09!659;UBERON:0002791!7.52e-09!33;UBERON:0001950!1.82e-08!20;UBERON:0000480!1.86e-08!626;UBERON:0000062!3.24e-08!511;UBERON:0000467!3.48e-08!625;UBERON:0000956!6.30e-08!25;UBERON:0000203!6.30e-08!25;UBERON:0002050!9.78e-08!605;UBERON:0005423!9.78e-08!605;UBERON:0000922!1.12e-07!612;UBERON:0000923!1.19e-07!604;UBERON:0005291!1.19e-07!604;UBERON:0006598!1.19e-07!604;UBERON:0002532!1.19e-07!604;UBERON:0005178!1.51e-07!34;UBERON:0002224!1.51e-07!34;UBERON:0005181!7.36e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.06e-12;53!UBERON:0002616;3.06e-12;53!UBERON:0001869;3.56e-12;32!UBERON:0002619;4.63e-12;22!UBERON:0003528;1.35e-11;34!UBERON:0002020;1.35e-11;34!UBERON:0001950;4.03e-11;20!UBERON:0002791;4.44e-11;32!UBERON:0002780;5.68e-11;41!UBERON:0001890;5.68e-11;41!UBERON:0001893;8.63e-11;34!UBERON:0000955;1.93e-10;68!UBERON:0000956;8.39e-10;25!UBERON:0000203;8.39e-10;25!UBERON:0001017;2.13e-09;75!UBERON:0004733;8.43e-09;12!UBERON:0002028;8.43e-09;12!UBERON:0004732;8.14e-08;13!UBERON:0002680;3.07e-07;9!UBERON:0001895;3.07e-07;9!UBERON:0001016;8.82e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.87e-22,53;UBERON:0002616,7.87e-22,53;UBERON:0001049,3.95e-21,56;UBERON:0005068,3.95e-21,56;UBERON:0006241,3.95e-21,56;UBERON:0007135,3.95e-21,56;UBERON:0000955,1.40e-20,68;UBERON:0006238,1.40e-20,68;UBERON:0001017,4.46e-19,81;UBERON:0010371,9.77e-17,104;UBERON:0001016,4.17e-16,89;UBERON:0003075,1.55e-15,82;UBERON:0007284,1.55e-15,82;UBERON:0000483,1.80e-15,306;UBERON:0000119,2.32e-15,309;UBERON:0000025,4.60e-15,192;UBERON:0002780,7.39e-15,41;UBERON:0001890,7.39e-15,41;UBERON:0003080,7.39e-15,41;UBERON:0006240,7.39e-15,41;UBERON:0002346,5.68e-14,86;UBERON:0004111,1.47e-13,240;UBERON:0001869,4.51e-13,32;UBERON:0011216,4.70e-13,223;UBERON:0003528,7.50e-13,34;UBERON:0002020,7.50e-13,34;UBERON:0004121,9.25e-13,171;UBERON:0000924,9.25e-13,171;UBERON:0006601,9.25e-13,171;UBERON:0003056,2.04e-12,61;UBERON:0002619,7.52e-12,22;UBERON:0001893,9.25e-12,34;UBERON:0002791,1.08e-11,32;UBERON:0001950,4.36e-11,20;UBERON:0010314,1.07e-10,132;UBERON:0000956,1.24e-09,25;UBERON:0000203,1.24e-09,25;UBERON:0004733,1.15e-08,12;UBERON:0002028,1.15e-08,12;UBERON:0007277,1.15e-08,12;UBERON:0004732,1.07e-07,13;UBERON:0003076,1.40e-07,15;UBERON:0003057,1.40e-07,15;UBERON:0002680,2.99e-07,9;UBERON:0001895,2.99e-07,9;UBERON:0010092,2.99e-07,9;UBERON:0005178,3.45e-07,34;UBERON:0002224,3.45e-07,34;UBERON:0005181,8.69e-07,35 | |||
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| ||
|short_description=p4@PLD3 | |||
}} | }} |
Latest revision as of 01:46, 18 September 2015
Short description: | p4@PLD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000409735_5end |
EntrezGene: | PLD3 |
HGNC: | 17158 |
UniProt: | Q8IV08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.01e-09 | 42 |
respiratory epithelial cell | 4.92e-07 | 13 |
endodermal cell | 8.85e-07 | 58 |