FFCP PHASE1:Hg19::chr17:7760425..7760452,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28212 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=288bp_to_DQ893290,DQ893319,DQ896634_5end | |||
|cluster_id=chr17:7760425..7760452,- | |||
|description=CAGE_peak_3_at_LSMD1_5end | |||
|id=chr17:7760425..7760452,- | |||
|ontology_enrichment_celltype=CL:0000183!3.34e-11!59;CL:0000187!1.33e-09!54;CL:0000680!2.96e-09!57;CL:0000056!2.96e-09!57;CL:0000355!2.96e-09!57;CL:0000055!9.39e-09!180;CL:0000192!5.87e-08!42;CL:0000514!5.87e-08!42;CL:0000393!1.22e-07!60;CL:0000211!1.22e-07!60;CL:0000359!4.46e-07!32;CL:0000222!8.00e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.08e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.33e-09,55;CL:0000680,4.96e-09,58;CL:0000056,4.96e-09,58;CL:0000355,4.96e-09,58;CL:0000192,1.14e-07,43;CL:0000514,1.14e-07,43;CL:0000393,3.84e-07,61;CL:0000211,3.84e-07,61;CL:0000359,5.03e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.28e-23!194;UBERON:0000119!7.58e-22!312;UBERON:0000483!2.24e-21!309;UBERON:0001049!1.75e-19!57;UBERON:0005068!1.75e-19!57;UBERON:0006241!1.75e-19!57;UBERON:0007135!1.75e-19!57;UBERON:0000477!1.33e-18!286;UBERON:0004111!8.25e-18!241;UBERON:0002616!2.43e-17!59;UBERON:0000955!3.35e-17!69;UBERON:0006238!3.35e-17!69;UBERON:0003075!1.65e-16!86;UBERON:0007284!1.65e-16!86;UBERON:0000475!1.88e-16!365;UBERON:0002346!5.59e-16!90;UBERON:0000481!9.36e-16!347;UBERON:0001017!1.23e-14!82;UBERON:0002780!1.28e-14!41;UBERON:0001890!1.28e-14!41;UBERON:0006240!1.28e-14!41;UBERON:0002020!1.85e-14!34;UBERON:0003528!1.85e-14!34;UBERON:0003080!2.83e-14!42;UBERON:0005743!2.39e-13!86;UBERON:0001893!4.37e-13!34;UBERON:0001869!5.83e-13!32;UBERON:0002791!6.36e-13!33;UBERON:0000064!7.48e-13!219;UBERON:0000073!9.74e-13!94;UBERON:0001016!9.74e-13!94;UBERON:0004290!2.63e-12!70;UBERON:0000914!2.46e-11!83;UBERON:0002329!2.46e-11!83;UBERON:0003077!2.46e-11!83;UBERON:0003059!2.46e-11!83;UBERON:0007282!2.46e-11!83;UBERON:0009618!2.46e-11!83;UBERON:0007285!2.46e-11!83;UBERON:0003056!3.19e-11!61;UBERON:0000956!2.63e-10!25;UBERON:0000203!2.63e-10!25;UBERON:0002619!3.98e-10!22;UBERON:0001134!5.35e-10!61;UBERON:0002036!5.35e-10!61;UBERON:0003082!5.35e-10!61;UBERON:0002385!9.49e-10!63;UBERON:0001015!9.49e-10!63;UBERON:0000383!9.49e-10!63;UBERON:0000486!1.99e-09!82;UBERON:0000033!2.73e-09!123;UBERON:0001950!5.45e-09!20;UBERON:0000153!7.44e-09!129;UBERON:0007811!7.44e-09!129;UBERON:0004121!9.63e-09!169;UBERON:0007023!1.03e-08!115;UBERON:0000924!1.20e-08!173;UBERON:0006601!1.20e-08!173;UBERON:0005256!3.51e-08!143;UBERON:0002049!2.50e-07!79;UBERON:0007798!2.50e-07!79;UBERON:0002100!3.78e-07!216;UBERON:0001981!4.17e-07!60;UBERON:0007500!4.17e-07!60;UBERON:0004537!4.17e-07!60;UBERON:0006965!4.17e-07!60;UBERON:0001637!5.70e-07!42;UBERON:0003509!5.70e-07!42;UBERON:0004572!5.70e-07!42;UBERON:0000055!5.79e-07!69;UBERON:0003914!6.31e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.59e-13;34!UBERON:0002020;6.59e-13;34!UBERON:0002791;1.15e-12;32!UBERON:0001869;1.91e-12;32!UBERON:0001893;6.26e-12;34!UBERON:0002780;4.99e-11;41!UBERON:0001890;4.99e-11;41!UBERON:0000956;8.46e-11;25!UBERON:0000203;8.46e-11;25!UBERON:0002619;1.56e-10;22!UBERON:0000073;2.09e-10;53!UBERON:0002616;2.09e-10;53!UBERON:0001950;2.32e-09;20!UBERON:0000955;3.55e-09;68!UBERON:0001017;1.78e-07;75 | |||
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| |||
|short_description=p3@LSMD1 | |||
}} |
Latest revision as of 02:11, 18 September 2015
Short description: | p3@LSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LSMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 288bp_to_DQ893290, DQ893319, DQ896634_5end |
EntrezGene: | LSMD1 |
HGNC: | 28212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.33e-09 | 55 |
muscle precursor cell | 4.96e-09 | 58 |
myoblast | 4.96e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.96e-09 | 58 |
smooth muscle cell | 1.14e-07 | 43 |
smooth muscle myoblast | 1.14e-07 | 43 |
electrically responsive cell | 3.84e-07 | 61 |
electrically active cell | 3.84e-07 | 61 |
vascular associated smooth muscle cell | 5.03e-07 | 32 |