FFCP PHASE1:Hg19::chr14:105635090..105635130,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3714 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6189 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y219 | |||
|association_with_transcript=30bp_to_ENST00000331782,ENST00000347004,NM_002226,NM_145159,uc001yqg.2,uc001yqh.2_5end | |||
|cluster_id=chr14:105635090..105635130,- | |||
|description=CAGE_peak_1_at_JAG2_5end | |||
|id=chr14:105635090..105635130,- | |||
|ontology_enrichment_celltype=CL:0000066!3.95e-32!254;CL:0000076!2.70e-18!62;CL:0002076!3.62e-15!43;CL:0002139!2.27e-14!24;CL:0000115!5.30e-13!35;CL:0000223!3.29e-12!59;CL:0000071!3.46e-11!18;CL:0002546!3.46e-11!18;CL:0002078!5.27e-11!44;CL:0000213!1.71e-10!57;CL:0000215!1.71e-10!57;CL:0002251!2.36e-08!21;CL:0002368!2.52e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.97e-16;24!CL:0002076;1.32e-13;42!CL:0000115;1.96e-13;36!CL:0000071;1.06e-12;18!CL:0002251;9.95e-11;20!CL:0000076;3.74e-10;63!CL:0002368;1.83e-09;13!CL:0002078;1.88e-08;45!CL:0000213;2.89e-07;58!CL:0000215;2.89e-07;58!CL:1000413;5.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.16e-27,253;CL:0002076,3.64e-18,42;CL:0000076,1.09e-17,63;CL:0002139,1.90e-16,24;CL:0000115,6.29e-16,36;CL:0000223,2.68e-14,58;CL:0000071,9.53e-13,18;CL:0002546,9.53e-13,18;CL:0002078,4.09e-12,45;CL:0000213,5.09e-11,58;CL:0000215,5.09e-11,58;CL:0002251,9.05e-11,20;CL:0002368,2.01e-09,13;CL:1000413,4.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.06e-12;18!CL:0000223;8.32e-08;58 | |||
|ontology_enrichment_disease=DOID:305!3.59e-10!106;DOID:0050687!3.37e-08!143;DOID:1749!5.62e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.48e-07,14;DOID:305,3.05e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.15e-17!115;UBERON:0004111!8.73e-15!241;UBERON:0001986!3.46e-11!18;UBERON:0004638!3.46e-11!18;UBERON:0004852!3.46e-11!18;UBERON:0000483!6.89e-11!309;UBERON:0000487!1.10e-10!22;UBERON:0000064!1.11e-10!219;UBERON:0004121!1.51e-10!169;UBERON:0000924!2.34e-10!173;UBERON:0006601!2.34e-10!173;UBERON:0000119!3.22e-10!312;UBERON:0000477!3.27e-10!286;UBERON:0001049!1.60e-09!57;UBERON:0005068!1.60e-09!57;UBERON:0006241!1.60e-09!57;UBERON:0007135!1.60e-09!57;UBERON:0004119!1.90e-09!169;UBERON:0000925!1.90e-09!169;UBERON:0006595!1.90e-09!169;UBERON:0000025!3.33e-09!194;UBERON:0003075!4.17e-09!86;UBERON:0007284!4.17e-09!86;UBERON:0006914!4.84e-09!25;UBERON:0001004!7.09e-09!72;UBERON:0002346!9.03e-09!90;UBERON:0000153!1.40e-08!129;UBERON:0007811!1.40e-08!129;UBERON:0000033!1.44e-08!123;UBERON:0005743!3.65e-08!86;UBERON:0003080!4.74e-08!42;UBERON:0001017!6.42e-08!82;UBERON:0000922!6.46e-08!612;UBERON:0000955!8.91e-08!69;UBERON:0006238!8.91e-08!69;UBERON:0000073!1.05e-07!94;UBERON:0001016!1.05e-07!94;UBERON:0000467!1.08e-07!625;UBERON:0002780!1.14e-07!41;UBERON:0001890!1.14e-07!41;UBERON:0006240!1.14e-07!41;UBERON:0000480!1.14e-07!626;UBERON:0004921!1.76e-07!129;UBERON:0004185!1.76e-07!129;UBERON:0000468!1.78e-07!659;UBERON:0002619!3.21e-07!22;UBERON:0002020!4.11e-07!34;UBERON:0003528!4.11e-07!34;UBERON:0002616!4.41e-07!59;UBERON:0002050!4.44e-07!605;UBERON:0005423!4.44e-07!605;UBERON:0000923!6.49e-07!604;UBERON:0005291!6.49e-07!604;UBERON:0006598!6.49e-07!604;UBERON:0002532!6.49e-07!604;UBERON:0001893!8.30e-07!34;UBERON:0001007!8.45e-07!155;UBERON:0001555!8.45e-07!155;UBERON:0007026!8.45e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.06e-12;18!UBERON:0001986;1.06e-12;18!UBERON:0004852;1.06e-12;18!UBERON:0000487;2.21e-12;22!UBERON:0000490;2.29e-11;33!UBERON:0006914;7.83e-11;25!UBERON:0002619;2.39e-07;22!UBERON:0003915;5.37e-07;9!UBERON:0004700;5.37e-07;9!UBERON:0001917;5.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.80e-19,114;UBERON:0004111,6.10e-15,240;UBERON:0004638,9.53e-13,18;UBERON:0001986,9.53e-13,18;UBERON:0004852,9.53e-13,18;UBERON:0000487,2.17e-12,22;UBERON:0010371,1.46e-11,104;UBERON:0011216,4.14e-11,223;UBERON:0006914,7.61e-11,25;UBERON:0000483,1.69e-10,306;UBERON:0000119,5.45e-10,309;UBERON:0001049,2.34e-09,56;UBERON:0005068,2.34e-09,56;UBERON:0006241,2.34e-09,56;UBERON:0007135,2.34e-09,56;UBERON:0004121,2.60e-09,171;UBERON:0000924,2.60e-09,171;UBERON:0006601,2.60e-09,171;UBERON:0000073,7.57e-09,53;UBERON:0002616,7.57e-09,53;UBERON:0004119,9.84e-09,160;UBERON:0000925,9.84e-09,160;UBERON:0006595,9.84e-09,160;UBERON:0000025,2.02e-08,192;UBERON:0002619,1.31e-07,22;UBERON:0003075,1.32e-07,82;UBERON:0007284,1.32e-07,82;UBERON:0000955,1.44e-07,68;UBERON:0006238,1.44e-07,68;UBERON:0002780,1.46e-07,41;UBERON:0001890,1.46e-07,41;UBERON:0003080,1.46e-07,41;UBERON:0006240,1.46e-07,41;UBERON:0001004,1.67e-07,74;UBERON:0003528,3.05e-07,34;UBERON:0002020,3.05e-07,34;UBERON:0003915,4.85e-07,9;UBERON:0004700,4.85e-07,9;UBERON:0001917,4.85e-07,9;UBERON:0001017,5.51e-07,81;UBERON:0002346,5.98e-07,86;UBERON:0001893,6.57e-07,34;UBERON:0001950,8.59e-07,20 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,4.42321085702716,11.1648186875588,0,1.84636884759917,0,0.331397375727916,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0.767658796194425,0.77408061658038,24.824373060931,23.1928557459253,10.7228662948368,0,0,0,0,0.401088894940283,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0,3.28875809207352,3.31620021343018,0.869409257205157,0,0.267540828089713,0,0.453237370790265,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0,0.886917589850256,0.263504357079378,3.73290365168481,35.7009382526691,20.763928795928,0,0.348259474598534,0,0.476981248610684,0.571994910780128,0.371457501329565,6.55915944310127,6.881876760849,10.7613555498354,12.4367747223282,11.3264847776675,18.4329088099845,8.98678356108286,11.3703374034505,13.1633517194083,10.0416183829401,17.3216606356933,10.6438094800592,31.4840054237139,7.72092468726324,46.9882329771421,5.71518261018111,6.51135180615892,8.33324955576584,29.1301611185178,13.2897192339538,18.3201743930407,0,0,37.9401825364005,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,1.21239604862719,1.30769522490767,0.151357427644931,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,11.2091294834712,10.3643525824517,11.7589884109492,0.975789649036763,0.927708378250397,1.2781333715647,1.7622379352613,1.7662459561294,0.36497735907583,0,0,0,0,0,1.18306800039844,0.505754070234305,0.723033089650446,0.55146986366197,0.217879444092406,0.71181185733329,1.21348177344148,0.98110732562673,0.38474715694639,14.763109092493,5.60967095213783,0,1.47008711385542,0,0,0.590789906681404,0,1.72183813960359,0,16.3527925258852,7.86812272803337,12.9682374411004,18.0547468059133,0,0,1.44331342025273,0.463721619900307,0.117408694235822,12.7042474029745,9.25971025153221,10.4639783729029,1.58040879591855,2.57545848628462,0,0,0,10.3107217385455,6.38332087155666,2.69372684760534,5.1943943167652,9.59091997096074,18.7857512790953,0,2.90559832243646,0,0.288239906833923,0.50496973370552,0.126995788584338,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0.871533458600294,0.99972991182057,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0,0.197030760201927,0.646882724578552,0.77005821767849,0,0,0.773288812777695,1.17261385734044,3.82763250991898,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0,0,1.37257369524342,0,0.215714200818617,0.213455115606889,0.303127571446259,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,3.38406458856542,31.8805287782223,3.49907757956406,0,0,0.262248829918848,0.902399225814824,0.847168708148562,1.56869953835371,1.46139224653261,1.05551628892876,26.1586783363062,12.2467467799091,7.55705706357488,47.8104483339897,0,0,0.509752546090077,2.49322802678617,0.447749509444357,0,0,1.02580050046556,1.64007322849853,0.325378394664303,1.854738209659,42.671370605348,43.0699589585469,5.74265537996172,13.0012049207304,0,1.83674364755032,0.154048617114644,0.460511024178389,1.37836572484531,0,0,0.93749290157711,2.1367688555217,14.7103574671271,28.2519399026706,55.8943680726278,13.9597737580659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,11.2579871888849,21.4496728171452,20.6892871236513,2.07116361708914,25.3998169876026,16.8471475667626,32.3704012081773,13.0942338117967,0,0,0,0.238231775457789,0,0,0,0,1.49553699578462,0.962479855263359,26.2193031099704,0.371606350251437,0,0,1.11598390910176,1.99579371432817,0.766021480529467,1.2700414963433,0,0,0.456469358066384,0,0,3.04725200042886,0,0,0,0,2.45792611446766,1.78940886313933,2.33588798396672,0,0,0,0,0,0,6.36277837387947,4.39524537815682,2.91265252198832,0,1.42068073403207,2.86493381685228,0.296964680832639,0.614321404198464,1.9882952955326,4.92342957436795,0,0,4.43363357068786,4.38345574152353,1.10513566212459,6.04638594850262,0,0,0,0.988551862620595,4.47552936689023,0.511572370226872,1.7755813014648,0,0,5.81599647657131,1.94813006139888,5.98841394003583,1.04171104434093,8.83345999961577,7.97499532978273,23.6690372433839,9.66163871112512,2.6002644994473,14.823965049383,1.74962768029953,1.04174996959975,0.885741385813839,2.53252521113357,4.5774520895125,2.76448149828062,3.84211904639612,1.75508317723178,3.37709236908869,39.7357671194019,3.07801034015188,0,15.6783454983881,3.94933635402997,0.977826347298073,1.2760046389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| |||
|short_description=p1@JAG2 | |||
}} |
Latest revision as of 18:30, 18 September 2015
Short description: | p1@JAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000331782, ENST00000347004, NM_002226, NM_145159, uc001yqg.2, uc001yqh.2_5end |
EntrezGene: | JAG2 |
HGNC: | 6189 |
UniProt: | Q9Y219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.16e-27 | 253 |
endo-epithelial cell | 3.64e-18 | 42 |
squamous epithelial cell | 1.09e-17 | 63 |
endothelial cell of vascular tree | 1.90e-16 | 24 |
endothelial cell | 6.29e-16 | 36 |
endodermal cell | 2.68e-14 | 58 |
blood vessel endothelial cell | 9.53e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.53e-13 | 18 |
meso-epithelial cell | 4.09e-12 | 45 |
lining cell | 5.09e-11 | 58 |
barrier cell | 5.09e-11 | 58 |
epithelial cell of alimentary canal | 9.05e-11 | 20 |
respiratory epithelial cell | 2.01e-09 | 13 |
endothelial cell of artery | 4.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.48e-07 | 14 |
carcinoma | 3.05e-07 | 106 |