FFCP PHASE1:Hg19::chr3:52489592..52489603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11188 | |EntrezGene=11188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18006 | |HGNC=18006 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_uc003dec.1_5end | |association_with_transcript=-18bp_to_uc003dec.1_5end | ||
|cluster_id=chr3:52489592..52489603,+ | |||
|description=CAGE_peak_3_at_NISCH_5end | |description=CAGE_peak_3_at_NISCH_5end | ||
|id=chr3:52489592..52489603,+ | |id=chr3:52489592..52489603,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.24e-13!86;UBERON:0001049!1.27e-13!57;UBERON:0005068!1.27e-13!57;UBERON:0006241!1.27e-13!57;UBERON:0007135!1.27e-13!57;UBERON:0001017!2.01e-13!82;UBERON:0000955!1.18e-12!69;UBERON:0006238!1.18e-12!69;UBERON:0002616!1.27e-12!59;UBERON:0000073!2.03e-12!94;UBERON:0001016!2.03e-12!94;UBERON:0001950!4.23e-12!20;UBERON:0003075!9.43e-12!86;UBERON:0007284!9.43e-12!86;UBERON:0002780!1.03e-11!41;UBERON:0001890!1.03e-11!41;UBERON:0006240!1.03e-11!41;UBERON:0002346!2.03e-11!90;UBERON:0001869!2.12e-11!32;UBERON:0002619!2.82e-11!22;UBERON:0001893!6.53e-11!34;UBERON:0003080!7.36e-11!42;UBERON:0002020!1.07e-10!34;UBERON:0003528!1.07e-10!34;UBERON:0000956!1.70e-10!25;UBERON:0000203!1.70e-10!25;UBERON:0002791!2.35e-10!33;UBERON:0003056!6.31e-09!61;UBERON:0000153!4.41e-08!129;UBERON:0007811!4.41e-08!129;UBERON:0007023!5.68e-08!115;UBERON:0000033!2.21e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.93e-21;20!UBERON:0002619;9.03e-21;22!UBERON:0001869;1.32e-19;32!UBERON:0000956;3.94e-19;25!UBERON:0000203;3.94e-19;25!UBERON:0002791;5.06e-18;32!UBERON:0001893;1.56e-17;34!UBERON:0003528;1.91e-17;34!UBERON:0002020;1.91e-17;34!UBERON:0000073;1.34e-15;53!UBERON:0002616;1.34e-15;53!UBERON:0002780;1.78e-15;41!UBERON:0001890;1.78e-15;41!UBERON:0000955;1.67e-11;68!UBERON:0001017;1.13e-10;75!UBERON:0000200;5.76e-08;6!UBERON:0002021;2.81e-07;5!UBERON:0001872;3.09e-07;5!UBERON:0001016;3.22e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-27,53;UBERON:0002616,1.29e-27,53;UBERON:0001049,4.43e-27,56;UBERON:0005068,4.43e-27,56;UBERON:0006241,4.43e-27,56;UBERON:0007135,4.43e-27,56;UBERON:0000955,1.08e-23,68;UBERON:0006238,1.08e-23,68;UBERON:0001869,1.54e-22,32;UBERON:0002780,2.44e-22,41;UBERON:0001890,2.44e-22,41;UBERON:0003080,2.44e-22,41;UBERON:0006240,2.44e-22,41;UBERON:0001950,4.94e-22,20;UBERON:0001017,5.14e-22,81;UBERON:0002619,1.30e-21,22;UBERON:0003075,7.66e-21,82;UBERON:0007284,7.66e-21,82;UBERON:0001893,1.20e-20,34;UBERON:0003528,1.65e-20,34;UBERON:0002020,1.65e-20,34;UBERON:0002791,1.69e-20,32;UBERON:0002346,3.53e-20,86;UBERON:0000956,9.62e-20,25;UBERON:0000203,9.62e-20,25;UBERON:0001016,3.56e-19,89;UBERON:0003056,1.27e-16,61;UBERON:0010371,1.07e-14,104;UBERON:0007023,5.85e-11,114;UBERON:0010314,1.43e-10,132;UBERON:0000200,2.50e-08,6;UBERON:0004121,3.34e-08,171;UBERON:0000924,3.34e-08,171;UBERON:0006601,3.34e-08,171;UBERON:0000025,7.13e-08,192;UBERON:0001872,3.72e-07,5;UBERON:0002021,3.72e-07,5 | |||
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| ||
|short_description=p3@NISCH | |short_description=p3@NISCH | ||
}} | }} |
Latest revision as of 23:59, 18 September 2015
Short description: | p3@NISCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NISCH_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_uc003dec.1_5end |
EntrezGene: | NISCH |
HGNC: | 18006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data