FFCP PHASE1:Hg19::chr5:83680689..83680709,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10085 | |EntrezGene=10085 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3173 | |HGNC=3173 | ||
|TSSclassifier=strong | |||
|UniProt=O43854,Q8N610 | |UniProt=O43854,Q8N610 | ||
|association_with_transcript=-78bp_to_ENST00000296591,NM_005711,uc003kio.1,uc003kip.1_5end | |association_with_transcript=-78bp_to_ENST00000296591,NM_005711,uc003kio.1,uc003kip.1_5end | ||
|cluster_id=chr5:83680689..83680709,- | |||
|description=CAGE_peak_1_at_EDIL3_5end | |description=CAGE_peak_1_at_EDIL3_5end | ||
|id=chr5:83680689..83680709,- | |id=chr5:83680689..83680709,- | ||
|ontology_enrichment_celltype=CL:0000055!3.07e-19!180;CL:0000359!2.14e-08!32;CL:0000183!7.71e-08!59;CL:0000393!1.64e-07!60;CL:0000211!1.64e-07!60;CL:0000680!1.81e-07!57;CL:0000056!1.81e-07!57;CL:0000355!1.81e-07!57;CL:0000187!2.48e-07!54;CL:0000192!3.10e-07!42;CL:0000514!3.10e-07!42 | |ontology_enrichment_celltype=CL:0000055!3.07e-19!180;CL:0000359!2.14e-08!32;CL:0000183!7.71e-08!59;CL:0000393!1.64e-07!60;CL:0000211!1.64e-07!60;CL:0000680!1.81e-07!57;CL:0000056!1.81e-07!57;CL:0000355!1.81e-07!57;CL:0000187!2.48e-07!54;CL:0000192!3.10e-07!42;CL:0000514!3.10e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.97e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.74e-09,32;CL:0000393,1.97e-07,61;CL:0000211,1.97e-07,61;CL:0000680,2.23e-07,58;CL:0000056,2.23e-07,58;CL:0000355,2.23e-07,58;CL:0000192,2.45e-07,43;CL:0000514,2.45e-07,43;CL:0000187,3.16e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;8.78e-13;34!UBERON:0003528;1.49e-12;34!UBERON:0002020;1.49e-12;34!UBERON:0002791;2.61e-12;32!UBERON:0001869;3.39e-12;32!UBERON:0001017;3.95e-12;75!UBERON:0000073;4.53e-12;53!UBERON:0002616;4.53e-12;53!UBERON:0002780;1.42e-11;41!UBERON:0001890;1.42e-11;41!UBERON:0000955;1.68e-11;68!UBERON:0002619;1.54e-10;22!UBERON:0000956;2.76e-10;25!UBERON:0000203;2.76e-10;25!UBERON:0001016;8.14e-10;83!UBERON:0001950;1.82e-09;20!UBERON:0004732;8.43e-08;13!UBERON:0004733;4.30e-07;12!UBERON:0002028;4.30e-07;12 | |||
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| ||
|short_description=p1@EDIL3 | |short_description=p1@EDIL3 | ||
}} | }} |
Latest revision as of 01:27, 19 September 2015
Short description: | p1@EDIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EDIL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000296591, NM_005711, uc003kio.1, uc003kip.1_5end |
EntrezGene: | EDIL3 |
HGNC: | 3173 |
UniProt: | O43854Q8N610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.74e-09 | 32 |
electrically responsive cell | 1.97e-07 | 61 |
electrically active cell | 1.97e-07 | 61 |
muscle precursor cell | 2.23e-07 | 58 |
myoblast | 2.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-07 | 58 |
smooth muscle cell | 2.45e-07 | 43 |
smooth muscle myoblast | 2.45e-07 | 43 |
muscle cell | 3.16e-07 | 55 |