FFCP PHASE1:Hg19::chr12:53715027..53715096,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:53715027..53715096,- to FFCP PHASE1:Hg19::chr12:53715027..53715096,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8086 | |EntrezGene=8086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13666 | |HGNC=13666 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000549450,ENST00000552876_5end | |||
|cluster_id=chr12:53715027..53715096,- | |||
|description=CAGE_peak_2_at_AAAS_5end | |||
|id=chr12:53715027..53715096,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-27!115;UBERON:0001049!3.73e-18!57;UBERON:0005068!3.73e-18!57;UBERON:0006241!3.73e-18!57;UBERON:0007135!3.73e-18!57;UBERON:0002616!4.27e-17!59;UBERON:0000955!5.10e-15!69;UBERON:0006238!5.10e-15!69;UBERON:0003080!1.54e-13!42;UBERON:0002780!2.24e-13!41;UBERON:0001890!2.24e-13!41;UBERON:0006240!2.24e-13!41;UBERON:0003075!2.54e-13!86;UBERON:0007284!2.54e-13!86;UBERON:0002346!3.17e-12!90;UBERON:0001017!6.01e-12!82;UBERON:0005743!9.21e-12!86;UBERON:0000153!2.24e-10!129;UBERON:0007811!2.24e-10!129;UBERON:0000033!2.59e-10!123;UBERON:0000073!2.87e-10!94;UBERON:0001016!2.87e-10!94;UBERON:0002020!6.61e-10!34;UBERON:0003528!6.61e-10!34;UBERON:0001893!1.17e-09!34;UBERON:0002791!2.43e-09!33;UBERON:0003056!9.69e-09!61;UBERON:0001869!1.24e-08!32;UBERON:0002619!4.79e-08!22;UBERON:0004121!9.37e-08!169;UBERON:0001950!2.41e-07!20;UBERON:0000924!2.75e-07!173;UBERON:0006601!2.75e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.33e-10;41!UBERON:0001890;8.33e-10;41!UBERON:0000073;9.22e-10;53!UBERON:0002616;9.22e-10;53!UBERON:0003528;4.06e-08;34!UBERON:0002020;4.06e-08;34!UBERON:0007023;5.22e-08;114!UBERON:0001893;5.34e-08;34!UBERON:0002619;8.61e-08;22!UBERON:0002791;1.16e-07;32!UBERON:0001869;1.74e-07;32!UBERON:0001017;2.16e-07;75!UBERON:0001950;3.90e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.86e-27,114;UBERON:0001049,6.92e-18,56;UBERON:0005068,6.92e-18,56;UBERON:0006241,6.92e-18,56;UBERON:0007135,6.92e-18,56;UBERON:0000073,2.40e-16,53;UBERON:0002616,2.40e-16,53;UBERON:0000955,7.70e-15,68;UBERON:0006238,7.70e-15,68;UBERON:0003075,2.80e-13,82;UBERON:0007284,2.80e-13,82;UBERON:0002780,3.00e-13,41;UBERON:0001890,3.00e-13,41;UBERON:0003080,3.00e-13,41;UBERON:0006240,3.00e-13,41;UBERON:0002346,3.95e-12,86;UBERON:0001017,4.20e-12,81;UBERON:0001016,2.16e-10,89;UBERON:0003528,8.99e-10,34;UBERON:0002020,8.99e-10,34;UBERON:0010371,1.13e-09,104;UBERON:0001893,1.59e-09,34;UBERON:0003056,7.96e-09,61;UBERON:0002791,1.02e-08,32;UBERON:0001869,1.68e-08,32;UBERON:0010314,2.42e-08,132;UBERON:0002619,4.31e-08,22;UBERON:0001950,2.19e-07,20;UBERON:0004121,5.13e-07,171;UBERON:0000924,5.13e-07,171;UBERON:0006601,5.13e-07,171 | |||
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| ||
|short_description=p2@AAAS | |||
}} | }} |
Latest revision as of 02:38, 19 September 2015
Short description: | p2@AAAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AAAS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549450, ENST00000552876_5end |
EntrezGene: | AAAS |
HGNC: | 13666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.86e-27 | 114 |
neural tube | 6.92e-18 | 56 |
neural rod | 6.92e-18 | 56 |
future spinal cord | 6.92e-18 | 56 |
neural keel | 6.92e-18 | 56 |
regional part of nervous system | 2.40e-16 | 53 |
regional part of brain | 2.40e-16 | 53 |
brain | 7.70e-15 | 68 |
future brain | 7.70e-15 | 68 |
neural plate | 2.80e-13 | 82 |
presumptive neural plate | 2.80e-13 | 82 |
regional part of forebrain | 3.00e-13 | 41 |
forebrain | 3.00e-13 | 41 |
anterior neural tube | 3.00e-13 | 41 |
future forebrain | 3.00e-13 | 41 |
neurectoderm | 3.95e-12 | 86 |
central nervous system | 4.20e-12 | 81 |
nervous system | 2.16e-10 | 89 |
brain grey matter | 8.99e-10 | 34 |
gray matter | 8.99e-10 | 34 |
ecto-epithelium | 1.13e-09 | 104 |
telencephalon | 1.59e-09 | 34 |
pre-chordal neural plate | 7.96e-09 | 61 |
regional part of telencephalon | 1.02e-08 | 32 |
cerebral hemisphere | 1.68e-08 | 32 |
structure with developmental contribution from neural crest | 2.42e-08 | 132 |
regional part of cerebral cortex | 4.31e-08 | 22 |
neocortex | 2.19e-07 | 20 |
ectoderm-derived structure | 5.13e-07 | 171 |
ectoderm | 5.13e-07 | 171 |
presumptive ectoderm | 5.13e-07 | 171 |