FFCP PHASE1:Hg19::chr19:50143346..50143409,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6237 | |EntrezGene=6237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10447 | |HGNC=10447 | ||
|TSSclassifier=strong | |||
|UniProt=P10301 | |UniProt=P10301 | ||
|association_with_transcript=0bp_to_ENST00000246792,NM_006270,uc002pop.1_5end | |association_with_transcript=0bp_to_ENST00000246792,NM_006270,uc002pop.1_5end | ||
|cluster_id=chr19:50143346..50143409,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_RRAS_5end | |description=CAGE_peak_1_at_RRAS_5end | ||
|id=chr19:50143346..50143409,- | |id=chr19:50143346..50143409,- | ||
|ontology_enrichment_celltype=CL:0000222!1.77e-24!119;CL:0000055!2.99e-21!180;CL:0000183!3.26e-19!59;CL:0000220!1.10e-18!246;CL:0002321!4.53e-18!248;CL:0000192!3.23e-17!42;CL:0000514!3.23e-17!42;CL:0000680!4.38e-17!57;CL:0000056!4.38e-17!57;CL:0000355!4.38e-17!57;CL:0000187!5.06e-17!54;CL:0002371!5.63e-16!591;CL:0000359!3.09e-15!32;CL:0000144!6.12e-14!625;CL:0000393!4.85e-13!60;CL:0000211!4.85e-13!60;CL:0000548!3.29e-11!679;CL:0000004!3.29e-11!679;CL:0000255!3.29e-11!679;CL:0000057!5.83e-11!75;CL:0000012!2.90e-10!682;CL:1000497!6.80e-08!18;CL:0002518!6.80e-08!18;CL:0000136!1.07e-07!15;CL:0000213!1.41e-07!57;CL:0000215!1.41e-07!57;CL:1000449!1.49e-07!16;CL:0002078!5.34e-07!44 | |ontology_enrichment_celltype=CL:0000222!1.77e-24!119;CL:0000055!2.99e-21!180;CL:0000183!3.26e-19!59;CL:0000220!1.10e-18!246;CL:0002321!4.53e-18!248;CL:0000192!3.23e-17!42;CL:0000514!3.23e-17!42;CL:0000680!4.38e-17!57;CL:0000056!4.38e-17!57;CL:0000355!4.38e-17!57;CL:0000187!5.06e-17!54;CL:0002371!5.63e-16!591;CL:0000359!3.09e-15!32;CL:0000144!6.12e-14!625;CL:0000393!4.85e-13!60;CL:0000211!4.85e-13!60;CL:0000548!3.29e-11!679;CL:0000004!3.29e-11!679;CL:0000255!3.29e-11!679;CL:0000057!5.83e-11!75;CL:0000012!2.90e-10!682;CL:1000497!6.80e-08!18;CL:0002518!6.80e-08!18;CL:0000136!1.07e-07!15;CL:0000213!1.41e-07!57;CL:0000215!1.41e-07!57;CL:1000449!1.49e-07!16;CL:0002078!5.34e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.46e-14;32!CL:0000192;5.38e-13;43!CL:0000187;1.21e-09;55!CL:1000497;1.71e-07;17!CL:0002518;1.71e-07;17!CL:0000136;2.03e-07;13!CL:1000449;3.70e-07;15!CL:0000393;4.01e-07;61!CL:0000211;4.01e-07;61!CL:0000134;9.27e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.57e-25,121;CL:0002321,1.42e-18,250;CL:0000192,1.25e-17,43;CL:0000514,1.25e-17,43;CL:0000680,1.72e-17,58;CL:0000056,1.72e-17,58;CL:0000355,1.72e-17,58;CL:0000187,1.98e-17,55;CL:0000359,3.09e-15,32;CL:0000393,2.03e-13,61;CL:0000211,2.03e-13,61;CL:0000057,2.30e-11,76;CL:0000213,1.01e-07,58;CL:0000215,1.01e-07,58;CL:0000136,1.07e-07,15;CL:1000497,1.69e-07,17;CL:0002518,1.69e-07,17;CL:1000449,3.72e-07,15;CL:0002078,3.83e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;5.38e-13;43!CL:0000355;1.84e-09;58!CL:0000222;5.09e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.35e-22!143;UBERON:0003914!9.88e-22!118;UBERON:0004872!3.64e-21!84;UBERON:0002100!3.94e-21!216;UBERON:0002049!1.82e-20!79;UBERON:0007798!1.82e-20!79;UBERON:0000486!2.09e-19!82;UBERON:0000914!9.46e-19!83;UBERON:0002329!9.46e-19!83;UBERON:0003077!9.46e-19!83;UBERON:0003059!9.46e-19!83;UBERON:0007282!9.46e-19!83;UBERON:0009618!9.46e-19!83;UBERON:0007285!9.46e-19!83;UBERON:0000055!1.84e-18!69;UBERON:0001981!9.54e-18!60;UBERON:0007500!9.54e-18!60;UBERON:0004537!9.54e-18!60;UBERON:0006965!9.54e-18!60;UBERON:0001009!2.64e-17!113;UBERON:0004535!6.81e-17!110;UBERON:0004290!8.56e-17!70;UBERON:0000926!2.05e-16!448;UBERON:0004120!2.05e-16!448;UBERON:0006603!2.05e-16!448;UBERON:0001637!2.58e-16!42;UBERON:0003509!2.58e-16!42;UBERON:0004572!2.58e-16!42;UBERON:0002385!8.17e-16!63;UBERON:0001015!8.17e-16!63;UBERON:0000383!8.17e-16!63;UBERON:0001134!1.35e-15!61;UBERON:0002036!1.35e-15!61;UBERON:0003082!1.35e-15!61;UBERON:0003104!1.08e-14!238;UBERON:0009142!1.08e-14!238;UBERON:0000468!1.59e-14!659;UBERON:0000490!2.08e-14!138;UBERON:0000467!5.09e-13!625;UBERON:0004573!8.42e-13!33;UBERON:0004571!8.42e-13!33;UBERON:0000480!1.01e-12!626;UBERON:0000475!3.30e-12!365;UBERON:0000119!7.12e-11!312;UBERON:0000483!1.28e-10!309;UBERON:0000481!3.72e-10!347;UBERON:0002050!2.02e-09!605;UBERON:0005423!2.02e-09!605;UBERON:0000923!2.18e-09!604;UBERON:0005291!2.18e-09!604;UBERON:0006598!2.18e-09!604;UBERON:0002532!2.18e-09!604;UBERON:0003103!3.32e-09!69;UBERON:0000922!1.21e-08!612;UBERON:0009569!3.91e-08!113;UBERON:0003081!5.81e-08!216;UBERON:0004876!7.43e-08!20;UBERON:0003102!8.73e-08!95;UBERON:0004211!1.49e-07!16;UBERON:0001285!1.49e-07!16;UBERON:0007684!1.49e-07!16;UBERON:0003220!1.49e-07!16;UBERON:0004208!1.49e-07!16;UBERON:0000477!1.68e-07!286;UBERON:0000080!2.39e-07!18;UBERON:0002120!2.39e-07!18;UBERON:0004875!2.39e-07!18;UBERON:0005721!2.39e-07!18;UBERON:0005754!2.39e-07!18;UBERON:0007297!2.39e-07!18;UBERON:0006555!2.69e-07!17;UBERON:0005103!2.69e-07!17;UBERON:0000083!2.69e-07!17;UBERON:0009201!2.69e-07!17;UBERON:0004819!2.69e-07!17;UBERON:0006553!2.69e-07!17;UBERON:0003074!2.69e-07!17;UBERON:0003060!2.69e-07!17;UBERON:0000947!2.78e-07!21;UBERON:0010191!2.78e-07!21;UBERON:0003064!2.87e-07!37;UBERON:0000353!5.31e-07!17;UBERON:0001008!5.86e-07!45;UBERON:0004111!6.11e-07!241;UBERON:0006554!6.97e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.58e-11;33!UBERON:0004571;1.58e-11;33!UBERON:0001637;1.87e-11;42!UBERON:0003509;1.87e-11;42!UBERON:0004572;1.87e-11;42!UBERON:0007500;8.36e-10;56!UBERON:0001981;8.36e-10;56!UBERON:0004537;8.36e-10;56!UBERON:0003914;1.33e-09;74!UBERON:0000055;1.78e-08;65!UBERON:0002049;2.36e-08;75!UBERON:0007798;2.36e-08;75!UBERON:0000947;2.74e-07;21!UBERON:0010191;2.74e-07;21!UBERON:0006555;3.70e-07;15!UBERON:0004819;3.70e-07;15!UBERON:0001285;3.70e-07;15!UBERON:0007684;3.70e-07;15 | |||
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| ||
|short_description=p1@RRAS | |short_description=p1@RRAS | ||
}} | }} |
Latest revision as of 08:23, 19 September 2015
Short description: | p1@RRAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RRAS_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000246792, NM_006270, uc002pop.1_5end |
EntrezGene: | RRAS |
HGNC: | 10447 |
UniProt: | P10301 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.57e-25 | 121 |
embryonic cell | 1.42e-18 | 250 |
smooth muscle cell | 1.25e-17 | 43 |
smooth muscle myoblast | 1.25e-17 | 43 |
muscle precursor cell | 1.72e-17 | 58 |
myoblast | 1.72e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-17 | 58 |
muscle cell | 1.98e-17 | 55 |
vascular associated smooth muscle cell | 3.09e-15 | 32 |
electrically responsive cell | 2.03e-13 | 61 |
electrically active cell | 2.03e-13 | 61 |
fibroblast | 2.30e-11 | 76 |
lining cell | 1.01e-07 | 58 |
barrier cell | 1.01e-07 | 58 |
fat cell | 1.07e-07 | 15 |
kidney cell | 1.69e-07 | 17 |
kidney epithelial cell | 1.69e-07 | 17 |
epithelial cell of nephron | 3.72e-07 | 15 |
meso-epithelial cell | 3.83e-07 | 45 |