FFCP PHASE1:Hg19::chr19:50826826..50826845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3748 | |EntrezGene=3748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6235 | |HGNC=6235 | ||
|TSSclassifier=strong | |||
|UniProt=Q59H29 | |UniProt=Q59H29 | ||
|association_with_transcript=464bp_to_AB208930_5end | |association_with_transcript=464bp_to_AB208930_5end | ||
|cluster_id=chr19:50826826..50826845,- | |||
|description=CAGE_peak_6_at_KCNC3_5end | |description=CAGE_peak_6_at_KCNC3_5end | ||
|id=chr19:50826826..50826845,- | |id=chr19:50826826..50826845,- | ||
|ontology_enrichment_celltype=CL:0002057!8.73e-10!42;CL:0000860!1.24e-08!45;CL:0002194!3.06e-07!63;CL:0000576!3.06e-07!63;CL:0000040!3.06e-07!63;CL:0000559!3.06e-07!63;CL:0002009!8.90e-07!65 | |ontology_enrichment_celltype=CL:0002057!8.73e-10!42;CL:0000860!1.24e-08!45;CL:0002194!3.06e-07!63;CL:0000576!3.06e-07!63;CL:0000040!3.06e-07!63;CL:0000559!3.06e-07!63;CL:0002009!8.90e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.13e-11;1!CL:0000235;6.16e-08;6 | |ontology_enrichment_celltype_v019=CL:0000313;1.13e-11;1!CL:0000235;6.16e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.63e-11,1;CL:0000235,6.60e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.30e-33;3!UBERON:0006601;3.06e-07;82 | |ontology_enrichment_development_v019=UBERON:0006215;6.30e-33;3!UBERON:0006601;3.06e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;4.78e-12;1!DOID:326;4.78e-12;1!DOID:3978;4.78e-12;1!DOID:3394;4.78e-12;1!DOID:5844;4.78e-12;1!DOID:0060060;1.13e-11;1!DOID:0060061;1.13e-11;1!DOID:2152;1.13e-11;1!DOID:8691;1.13e-11;1 | |ontology_enrichment_disease_v019=DOID:178;4.78e-12;1!DOID:326;4.78e-12;1!DOID:3978;4.78e-12;1!DOID:3394;4.78e-12;1!DOID:5844;4.78e-12;1!DOID:0060060;1.13e-11;1!DOID:0060061;1.13e-11;1!DOID:2152;1.13e-11;1!DOID:8691;1.13e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:178,4.06e-12,1;DOID:326,4.06e-12,1;DOID:3978,4.06e-12,1;DOID:3394,4.06e-12,1;DOID:5844,4.06e-12,1;DOID:0060060,1.32e-11,1;DOID:0060061,1.32e-11,1;DOID:8691,1.32e-11,1;DOID:2152,1.63e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.48e-28!57;UBERON:0005068!2.48e-28!57;UBERON:0006241!2.48e-28!57;UBERON:0007135!2.48e-28!57;UBERON:0002616!2.35e-22!59;UBERON:0007023!2.01e-21!115;UBERON:0002780!4.93e-21!41;UBERON:0001890!4.93e-21!41;UBERON:0006240!4.93e-21!41;UBERON:0001017!1.13e-20!82;UBERON:0002346!2.33e-20!90;UBERON:0003080!2.89e-20!42;UBERON:0002020!4.90e-20!34;UBERON:0003528!4.90e-20!34;UBERON:0003075!5.87e-20!86;UBERON:0007284!5.87e-20!86;UBERON:0005743!6.26e-20!86;UBERON:0000955!9.67e-20!69;UBERON:0006238!9.67e-20!69;UBERON:0001893!1.31e-18!34;UBERON:0001869!1.42e-18!32;UBERON:0002791!1.13e-17!33;UBERON:0000073!3.34e-17!94;UBERON:0001016!3.34e-17!94;UBERON:0002619!1.04e-15!22;UBERON:0000956!2.39e-14!25;UBERON:0000203!2.39e-14!25;UBERON:0003056!2.62e-14!61;UBERON:0001950!7.81e-14!20;UBERON:0000153!2.89e-10!129;UBERON:0007811!2.89e-10!129;UBERON:0000033!2.10e-09!123;UBERON:0003076!3.18e-09!15;UBERON:0003057!3.18e-09!15;UBERON:0000200!2.17e-08!6;UBERON:0001871!5.63e-08!7;UBERON:0002420!9.35e-08!9;UBERON:0007245!9.35e-08!9;UBERON:0010009!9.35e-08!9;UBERON:0010011!9.35e-08!9;UBERON:0000454!9.35e-08!9;UBERON:0002308!3.29e-07!9;UBERON:0000125!3.29e-07!9;UBERON:0004733!8.96e-07!12;UBERON:0002028!8.96e-07!12;UBERON:0007277!8.96e-07!12;UBERON:0000924!9.96e-07!173;UBERON:0006601!9.96e-07!173 | |ontology_enrichment_uberon=UBERON:0001049!2.48e-28!57;UBERON:0005068!2.48e-28!57;UBERON:0006241!2.48e-28!57;UBERON:0007135!2.48e-28!57;UBERON:0002616!2.35e-22!59;UBERON:0007023!2.01e-21!115;UBERON:0002780!4.93e-21!41;UBERON:0001890!4.93e-21!41;UBERON:0006240!4.93e-21!41;UBERON:0001017!1.13e-20!82;UBERON:0002346!2.33e-20!90;UBERON:0003080!2.89e-20!42;UBERON:0002020!4.90e-20!34;UBERON:0003528!4.90e-20!34;UBERON:0003075!5.87e-20!86;UBERON:0007284!5.87e-20!86;UBERON:0005743!6.26e-20!86;UBERON:0000955!9.67e-20!69;UBERON:0006238!9.67e-20!69;UBERON:0001893!1.31e-18!34;UBERON:0001869!1.42e-18!32;UBERON:0002791!1.13e-17!33;UBERON:0000073!3.34e-17!94;UBERON:0001016!3.34e-17!94;UBERON:0002619!1.04e-15!22;UBERON:0000956!2.39e-14!25;UBERON:0000203!2.39e-14!25;UBERON:0003056!2.62e-14!61;UBERON:0001950!7.81e-14!20;UBERON:0000153!2.89e-10!129;UBERON:0007811!2.89e-10!129;UBERON:0000033!2.10e-09!123;UBERON:0003076!3.18e-09!15;UBERON:0003057!3.18e-09!15;UBERON:0000200!2.17e-08!6;UBERON:0001871!5.63e-08!7;UBERON:0002420!9.35e-08!9;UBERON:0007245!9.35e-08!9;UBERON:0010009!9.35e-08!9;UBERON:0010011!9.35e-08!9;UBERON:0000454!9.35e-08!9;UBERON:0002308!3.29e-07!9;UBERON:0000125!3.29e-07!9;UBERON:0004733!8.96e-07!12;UBERON:0002028!8.96e-07!12;UBERON:0007277!8.96e-07!12;UBERON:0000924!9.96e-07!173;UBERON:0006601!9.96e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.82e-28;22!UBERON:0000956;6.39e-25;25!UBERON:0000203;6.39e-25;25!UBERON:0001950;6.45e-24;20!UBERON:0001869;1.37e-18;32!UBERON:0001893;1.38e-18;34!UBERON:0002791;9.96e-18;32!UBERON:0002037;8.35e-17;6!UBERON:0000200;1.46e-16;6!UBERON:0003528;2.64e-16;34!UBERON:0002020;2.64e-16;34!UBERON:0002780;2.41e-13;41!UBERON:0001890;2.41e-13;41!UBERON:0000073;2.68e-13;53!UBERON:0002616;2.68e-13;53!UBERON:0000955;4.45e-12;68!UBERON:0002581;4.78e-12;1!UBERON:0002902;1.13e-11;1!UBERON:0004911;1.13e-11;1!UBERON:0009899;1.13e-11;1!UBERON:0002680;2.14e-11;9!UBERON:0001895;2.14e-11;9!UBERON:0001017;1.01e-10;75!UBERON:0001872;1.69e-09;5!UBERON:0002021;2.36e-09;5!UBERON:0004733;1.13e-08;12!UBERON:0002028;1.13e-08;12!UBERON:0001016;1.74e-08;83!UBERON:0004732;4.81e-08;13!UBERON:0001871;5.42e-07;6!UBERON:0002771;8.93e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.82e-28;22!UBERON:0000956;6.39e-25;25!UBERON:0000203;6.39e-25;25!UBERON:0001950;6.45e-24;20!UBERON:0001869;1.37e-18;32!UBERON:0001893;1.38e-18;34!UBERON:0002791;9.96e-18;32!UBERON:0002037;8.35e-17;6!UBERON:0000200;1.46e-16;6!UBERON:0003528;2.64e-16;34!UBERON:0002020;2.64e-16;34!UBERON:0002780;2.41e-13;41!UBERON:0001890;2.41e-13;41!UBERON:0000073;2.68e-13;53!UBERON:0002616;2.68e-13;53!UBERON:0000955;4.45e-12;68!UBERON:0002581;4.78e-12;1!UBERON:0002902;1.13e-11;1!UBERON:0004911;1.13e-11;1!UBERON:0009899;1.13e-11;1!UBERON:0002680;2.14e-11;9!UBERON:0001895;2.14e-11;9!UBERON:0001017;1.01e-10;75!UBERON:0001872;1.69e-09;5!UBERON:0002021;2.36e-09;5!UBERON:0004733;1.13e-08;12!UBERON:0002028;1.13e-08;12!UBERON:0001016;1.74e-08;83!UBERON:0004732;4.81e-08;13!UBERON:0001871;5.42e-07;6!UBERON:0002771;8.93e-07;2 | ||
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| ||
|short_description=p6@KCNC3 | |short_description=p6@KCNC3 | ||
}} | }} |
Latest revision as of 10:43, 19 September 2015
Short description: | p6@KCNC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KCNC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 464bp_to_AB208930_5end |
EntrezGene: | KCNC3 |
HGNC: | 6235 |
UniProt: | Q59H29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.63e-11 | 1 |
macrophage | 6.60e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.06e-12 | 1 |
ischemia | 4.06e-12 | 1 |
extrinsic cardiomyopathy | 4.06e-12 | 1 |
myocardial ischemia | 4.06e-12 | 1 |
myocardial infarction | 4.06e-12 | 1 |
non-Hodgkin lymphoma | 1.32e-11 | 1 |
cutaneous T cell lymphoma | 1.32e-11 | 1 |
mycosis fungoides | 1.32e-11 | 1 |
ovary epithelial cancer | 1.63e-11 | 1 |