FFCP PHASE1:Hg19::chr8:93115274..93115323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=862 | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |HGNC=1535 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4J5,Q06455 | |UniProt=Q7Z4J5,Q06455 | ||
|association_with_transcript=130bp_to_ENST00000523629,NM_001198633,NM_175634_5end | |association_with_transcript=130bp_to_ENST00000523629,NM_001198633,NM_175634_5end | ||
|cluster_id=chr8:93115274..93115323,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_4_at_RUNX1T1_5end | |description=CAGE_peak_4_at_RUNX1T1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!1.97e-08!75;CL:0002620!8.24e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.97e-08!75;CL:0002620!8.24e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.44e-07;23 | |ontology_enrichment_celltype_v019=CL:0002620;5.44e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.14e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.54e-37!115;UBERON:0001017!7.39e-24!82;UBERON:0000073!4.83e-23!94;UBERON:0001016!4.83e-23!94;UBERON:0001049!4.85e-23!57;UBERON:0005068!4.85e-23!57;UBERON:0006241!4.85e-23!57;UBERON:0007135!4.85e-23!57;UBERON:0005743!1.62e-22!86;UBERON:0002616!4.91e-19!59;UBERON:0000955!5.50e-19!69;UBERON:0006238!5.50e-19!69;UBERON:0003080!2.04e-16!42;UBERON:0003075!4.81e-16!86;UBERON:0007284!4.81e-16!86;UBERON:0002780!1.04e-15!41;UBERON:0001890!1.04e-15!41;UBERON:0006240!1.04e-15!41;UBERON:0004121!5.59e-15!169;UBERON:0001893!1.20e-14!34;UBERON:0002020!1.29e-14!34;UBERON:0003528!1.29e-14!34;UBERON:0002346!1.32e-14!90;UBERON:0001869!2.84e-14!32;UBERON:0002791!3.34e-14!33;UBERON:0000924!4.26e-14!173;UBERON:0006601!4.26e-14!173;UBERON:0000153!4.22e-13!129;UBERON:0007811!4.22e-13!129;UBERON:0000033!7.69e-13!123;UBERON:0000956!1.16e-12!25;UBERON:0000203!1.16e-12!25;UBERON:0002619!2.45e-12!22;UBERON:0003056!1.71e-11!61;UBERON:0001950!1.84e-11!20;UBERON:0000468!3.40e-09!659;UBERON:0000475!2.53e-08!365;UBERON:0003076!6.98e-08!15;UBERON:0003057!6.98e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!4.54e-37!115;UBERON:0001017!7.39e-24!82;UBERON:0000073!4.83e-23!94;UBERON:0001016!4.83e-23!94;UBERON:0001049!4.85e-23!57;UBERON:0005068!4.85e-23!57;UBERON:0006241!4.85e-23!57;UBERON:0007135!4.85e-23!57;UBERON:0005743!1.62e-22!86;UBERON:0002616!4.91e-19!59;UBERON:0000955!5.50e-19!69;UBERON:0006238!5.50e-19!69;UBERON:0003080!2.04e-16!42;UBERON:0003075!4.81e-16!86;UBERON:0007284!4.81e-16!86;UBERON:0002780!1.04e-15!41;UBERON:0001890!1.04e-15!41;UBERON:0006240!1.04e-15!41;UBERON:0004121!5.59e-15!169;UBERON:0001893!1.20e-14!34;UBERON:0002020!1.29e-14!34;UBERON:0003528!1.29e-14!34;UBERON:0002346!1.32e-14!90;UBERON:0001869!2.84e-14!32;UBERON:0002791!3.34e-14!33;UBERON:0000924!4.26e-14!173;UBERON:0006601!4.26e-14!173;UBERON:0000153!4.22e-13!129;UBERON:0007811!4.22e-13!129;UBERON:0000033!7.69e-13!123;UBERON:0000956!1.16e-12!25;UBERON:0000203!1.16e-12!25;UBERON:0002619!2.45e-12!22;UBERON:0003056!1.71e-11!61;UBERON:0001950!1.84e-11!20;UBERON:0000468!3.40e-09!659;UBERON:0000475!2.53e-08!365;UBERON:0003076!6.98e-08!15;UBERON:0003057!6.98e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.16e-14;22!UBERON:0001869;3.65e-14;32!UBERON:0001893;2.69e-13;34!UBERON:0002791;3.32e-13;32!UBERON:0003528;3.91e-13;34!UBERON:0002020;3.91e-13;34!UBERON:0002780;4.67e-13;41!UBERON:0001890;4.67e-13;41!UBERON:0000956;4.97e-13;25!UBERON:0000203;4.97e-13;25!UBERON:0001950;7.24e-13;20!UBERON:0000073;2.49e-12;53!UBERON:0002616;2.49e-12;53!UBERON:0001017;3.13e-10;75!UBERON:0007023;1.19e-09;114!UBERON:0000955;2.62e-09;68!UBERON:0001016;4.38e-09;83!UBERON:0000922;1.40e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0002619;3.16e-14;22!UBERON:0001869;3.65e-14;32!UBERON:0001893;2.69e-13;34!UBERON:0002791;3.32e-13;32!UBERON:0003528;3.91e-13;34!UBERON:0002020;3.91e-13;34!UBERON:0002780;4.67e-13;41!UBERON:0001890;4.67e-13;41!UBERON:0000956;4.97e-13;25!UBERON:0000203;4.97e-13;25!UBERON:0001950;7.24e-13;20!UBERON:0000073;2.49e-12;53!UBERON:0002616;2.49e-12;53!UBERON:0001017;3.13e-10;75!UBERON:0007023;1.19e-09;114!UBERON:0000955;2.62e-09;68!UBERON:0001016;4.38e-09;83!UBERON:0000922;1.40e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.75e-37,114;UBERON:0001049,7.35e-24,56;UBERON:0005068,7.35e-24,56;UBERON:0006241,7.35e-24,56;UBERON:0007135,7.35e-24,56;UBERON:0001016,1.09e-22,89;UBERON:0001017,1.82e-22,81;UBERON:0000073,1.70e-21,53;UBERON:0002616,1.70e-21,53;UBERON:0000955,1.44e-18,68;UBERON:0006238,1.44e-18,68;UBERON:0002780,3.27e-17,41;UBERON:0001890,3.27e-17,41;UBERON:0003080,3.27e-17,41;UBERON:0006240,3.27e-17,41;UBERON:0003075,2.44e-16,82;UBERON:0007284,2.44e-16,82;UBERON:0001869,2.55e-16,32;UBERON:0001893,6.68e-16,34;UBERON:0003528,7.39e-16,34;UBERON:0002020,7.39e-16,34;UBERON:0002791,6.13e-15,32;UBERON:0004121,6.47e-15,171;UBERON:0000924,6.47e-15,171;UBERON:0006601,6.47e-15,171;UBERON:0002346,7.20e-15,86;UBERON:0002619,8.59e-15,22;UBERON:0010371,8.59e-14,104;UBERON:0001950,1.63e-13,20;UBERON:0000956,1.68e-13,25;UBERON:0000203,1.68e-13,25;UBERON:0011216,4.51e-13,223;UBERON:0010314,8.17e-12,132;UBERON:0003056,7.02e-10,61;UBERON:0003076,7.10e-08,15;UBERON:0003057,7.10e-08,15 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.55049844505568,0,1.34088328328186,0.872338524100369,2.53299878168311,0,1.82829939739887,0,0,0.218441372130172,0,0.618831764800233,0.662794751455832,0,0,0,0,0.861847406537515,0.204000691244253,0.940364164434263,0.572471974262113,1.36874425072884,0.502170558379211,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.80719576192283,0.50133791063589,1.44846518960824,1.5905718941022,0.486634870302636,0,0,0,1.30979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0.838998872419812,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0,0,1.3394959242612,1.12264686313085,0.900891843866578,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0.662045904066094,0.860509862246441,0.709336764396714,0.560677600142307,0,0.24666754841716,1.8672662123986,0,0,0.454072282934794,0,1.17160715916898,0,0,0.149448680551801,0.587172493218824,0.323745888736263,0.140450806702248,1.02077085627447,0.245668634623536,2.06651562351531,0,2.47266929278557,0.910161361938026,0,0.168336113954066,1.12606667884768,0.277064115484183,1.31693286264251,0.30648779579902,1.65261864797256,0,3.58779271377724,3.84403299873421,1.27159140695737,4.50136644126603,1.75189299705346,3.86460810068444,3.7223371266318,2.19409231913646,1.36411807225678,5.55354303337052,3.95814564161887,2.26304479546337,3.90510551768276,2.11579406278045,0.847802961552438,0,0,0,0.121973706129595,0,0.232387885739037,0.414644220061482,0,0,0,0.643240938192885,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0.201057944823262,0,0.977424915930974,1.03993478527958,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0.22001485746285,0.387815147273333,3.57656445851882,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0.239624855491583,3.44585807502342,0,0,0,0,0,0,0,0,0.508189248444927,6.50699269288109,2.31986643833309,1.67516265334349,5.74144876487847,0,0,0,2.33113834266366,0.500170521059677,0.271265023699736,1.87173775377726,0.892144943985809,1.89242898040722,2.22568688486155,0.601892199455438,0,2.0694614258501,1.32845119707087,0,1.12948698808508,0.391602314925481,1.37257369524342,0,0,0.106727557803444,0,0,0.604780586659361,2.23297027036899,2.14846762603287,1.96462066103151,1.79394808957981,2.04682899626681,0.482561763430822,0,0.154209693802656,0.355123450626254,0.574890092096664,0,1.04589340613963,0,0,0,0.68888668898764,0.546273504020151,1.44236856455367,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.44257416306811,0.54941678891006,0.495056999523528,0,0,0,1.06337790121334,0.308097234229289,0.614014698904518,0.275673144969061,1.39646318328756,0.870100163485371,0.255679882248303,1.15741646340759,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0,0.255897791311334,2.1396949401696,0,0,0.719489830333259,1.09814811894422,0.471249609382746,0,0,0.421258456238981,0,0.243713489631284,0,0.9554993798559,1.1312434556297,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.844430541190656,0.987884678879706,0.75894634753143,0.349934720244983,0,0,0,1.60044461320525,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,2.33150377598474,0,0,2.19762268907841,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0.222617410045812,0.16480387422676,0,4.5827037297746,5.24939439509181,0,0.409074730008619,0,0,0,0,0,2.86065876347107,0,0,2.90799823828566,1.29875337426592,29.9420697001791,0,0,9.42499448065232,0,0,0,0.689486746482929,0.291604613383254,2.60437492399938,0,1.5677537021303,19.8356257212208,13.7118282314719,12.1174523770954,1.09692698576986,0,0,5.1556673197544,1.70913083770502,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,2.21143911258348,5.49927130440263,0,0,0,1.01101699471016,12.8412423567806,2.10838001152805,0,0,0,0.789168805698781,4.83962864194656,30.607276163049,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,1.64881328030313,0,2.93774963014692,0,0,1.89932387867636,0,0,4.4825128895264,0,0,0,0,0,0,0,0,0,0,2.88950589901519,3.00210144354895,2.0535806833799,0,0.429765441419957,0,4.18923601908381,6.41649187232714,0,1.99679000498991,2.57535628881943,4.24025769139558,2.88888931692923,0,0,0,0,0,0,0,3.18091875923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| ||
|short_description=p4@RUNX1T1 | |short_description=p4@RUNX1T1 | ||
}} | }} |
Latest revision as of 11:57, 19 September 2015
Short description: | p4@RUNX1T1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 130bp_to_ENST00000523629, NM_001198633, NM_175634_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | Q7Z4J5Q06455 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.14e-07 | 23 |