FFCP PHASE1:Hg19::chr6:105585022..105585112,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11149 | |EntrezGene=11149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1152 | |HGNC=1152 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NE79 | |UniProt=Q8NE79 | ||
|association_with_transcript=0bp_to_ENST00000314641,NM_001199563,uc003pqy.2_5end | |association_with_transcript=0bp_to_ENST00000314641,NM_001199563,uc003pqy.2_5end | ||
|cluster_id=chr6:105585022..105585112,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_1_at_BVES_5end | |description=CAGE_peak_1_at_BVES_5end | ||
|id=chr6:105585022..105585112,- | |id=chr6:105585022..105585112,- | ||
|ontology_enrichment_celltype=CL:0000055!7.90e-17!180;CL:0000057!6.27e-09!75 | |ontology_enrichment_celltype=CL:0000055!7.90e-17!180;CL:0000057!6.27e-09!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.29e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.29e-20!365;UBERON:0004121!1.41e-15!169;UBERON:0007023!2.47e-14!115;UBERON:0000924!4.40e-14!173;UBERON:0006601!4.40e-14!173;UBERON:0000468!2.96e-12!659;UBERON:0000033!3.41e-12!123;UBERON:0000073!1.07e-11!94;UBERON:0001016!1.07e-11!94;UBERON:0003102!1.23e-11!95;UBERON:0001049!1.33e-11!57;UBERON:0005068!1.33e-11!57;UBERON:0006241!1.33e-11!57;UBERON:0007135!1.33e-11!57;UBERON:0000483!1.46e-11!309;UBERON:0000153!2.22e-11!129;UBERON:0007811!2.22e-11!129;UBERON:0000119!2.49e-11!312;UBERON:0000467!3.14e-11!625;UBERON:0000480!3.99e-11!626;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0002616!2.97e-10!59;UBERON:0005743!3.40e-10!86;UBERON:0000481!3.78e-10!347;UBERON:0001017!3.97e-10!82;UBERON:0004111!4.34e-10!241;UBERON:0003075!5.06e-10!86;UBERON:0007284!5.06e-10!86;UBERON:0000477!1.72e-08!286;UBERON:0002346!1.93e-08!90;UBERON:0003080!2.11e-08!42;UBERON:0000486!6.15e-08!82;UBERON:0002780!6.31e-08!41;UBERON:0001890!6.31e-08!41;UBERON:0006240!6.31e-08!41;UBERON:0002199!1.39e-07!45;UBERON:0002416!1.39e-07!45;UBERON:0002097!2.21e-07!40;UBERON:0000914!3.40e-07!83;UBERON:0002329!3.40e-07!83;UBERON:0003077!3.40e-07!83;UBERON:0003059!3.40e-07!83;UBERON:0007282!3.40e-07!83;UBERON:0009618!3.40e-07!83;UBERON:0007285!3.40e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.53e-07;31!UBERON:0001015;2.53e-07;31!UBERON:0000383;2.53e-07;31!UBERON:0001134;3.74e-07;16!UBERON:0002036;3.74e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.28e-15,114;UBERON:0004121,2.21e-13,171;UBERON:0000924,2.21e-13,171;UBERON:0006601,2.21e-13,171;UBERON:0010314,3.49e-13,132;UBERON:0010371,5.86e-13,104;UBERON:0001049,2.15e-11,56;UBERON:0005068,2.15e-11,56;UBERON:0006241,2.15e-11,56;UBERON:0007135,2.15e-11,56;UBERON:0001016,4.84e-11,89;UBERON:0003102,5.73e-11,99;UBERON:0003075,3.58e-10,82;UBERON:0007284,3.58e-10,82;UBERON:0000073,3.95e-10,53;UBERON:0002616,3.95e-10,53;UBERON:0000483,4.78e-10,306;UBERON:0000955,5.70e-10,68;UBERON:0006238,5.70e-10,68;UBERON:0000119,7.81e-10,309;UBERON:0001017,1.37e-09,81;UBERON:0004111,1.50e-08,240;UBERON:0002346,1.67e-08,86;UBERON:0002780,4.05e-08,41;UBERON:0001890,4.05e-08,41;UBERON:0003080,4.05e-08,41;UBERON:0006240,4.05e-08,41;UBERON:0002199,5.06e-08,46;UBERON:0002416,5.06e-08,46;UBERON:0002097,8.10e-08,41;UBERON:0000486,1.17e-07,83;UBERON:0003528,8.44e-07,34;UBERON:0002020,8.44e-07,34;UBERON:0007524,9.83e-07,73 | |||
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| ||
|short_description=p1@BVES | |short_description=p1@BVES | ||
}} | }} |
Latest revision as of 14:06, 19 September 2015
Short description: | p1@BVES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BVES_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000314641, NM_001199563, uc003pqy.2_5end |
EntrezGene: | BVES |
HGNC: | 1152 |
UniProt: | Q8NE79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.29e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.28e-15 | 114 |
ectoderm-derived structure | 2.21e-13 | 171 |
ectoderm | 2.21e-13 | 171 |
presumptive ectoderm | 2.21e-13 | 171 |
structure with developmental contribution from neural crest | 3.49e-13 | 132 |
ecto-epithelium | 5.86e-13 | 104 |
neural tube | 2.15e-11 | 56 |
neural rod | 2.15e-11 | 56 |
future spinal cord | 2.15e-11 | 56 |
neural keel | 2.15e-11 | 56 |
nervous system | 4.84e-11 | 89 |
surface structure | 5.73e-11 | 99 |
neural plate | 3.58e-10 | 82 |
presumptive neural plate | 3.58e-10 | 82 |
regional part of nervous system | 3.95e-10 | 53 |
regional part of brain | 3.95e-10 | 53 |
epithelium | 4.78e-10 | 306 |
brain | 5.70e-10 | 68 |
future brain | 5.70e-10 | 68 |
cell layer | 7.81e-10 | 309 |
central nervous system | 1.37e-09 | 81 |
anatomical conduit | 1.50e-08 | 240 |
neurectoderm | 1.67e-08 | 86 |
regional part of forebrain | 4.05e-08 | 41 |
forebrain | 4.05e-08 | 41 |
anterior neural tube | 4.05e-08 | 41 |
future forebrain | 4.05e-08 | 41 |
integument | 5.06e-08 | 46 |
integumental system | 5.06e-08 | 46 |
skin of body | 8.10e-08 | 41 |
multilaminar epithelium | 1.17e-07 | 83 |
brain grey matter | 8.44e-07 | 34 |
gray matter | 8.44e-07 | 34 |
dense mesenchyme tissue | 9.83e-07 | 73 |