FFCP PHASE1:Hg19::chr19:52643169..52643199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90317 | |EntrezGene=90317 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28062 | |HGNC=28062 | ||
|TSSclassifier=strong | |||
|UniProt=Q08AN1 | |UniProt=Q08AN1 | ||
|association_with_transcript=0bp_to_ENST00000330123,NM_178523,uc002pym.2,uc002pyn.2_5end | |association_with_transcript=0bp_to_ENST00000330123,NM_178523,uc002pym.2,uc002pyn.2_5end | ||
|cluster_id=chr19:52643169..52643199,- | |||
|description=CAGE_peak_1_at_ZNF616_5end | |description=CAGE_peak_1_at_ZNF616_5end | ||
|id=chr19:52643169..52643199,- | |id=chr19:52643169..52643199,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.77e-13!82;UBERON:0005743!4.09e-13!86;UBERON:0001049!5.00e-13!57;UBERON:0005068!5.00e-13!57;UBERON:0006241!5.00e-13!57;UBERON:0007135!5.00e-13!57;UBERON:0007023!2.31e-12!115;UBERON:0000073!2.32e-12!94;UBERON:0001016!2.32e-12!94;UBERON:0003080!4.02e-12!42;UBERON:0000924!5.26e-12!173;UBERON:0006601!5.26e-12!173;UBERON:0004121!7.54e-12!169;UBERON:0002780!8.10e-12!41;UBERON:0001890!8.10e-12!41;UBERON:0006240!8.10e-12!41;UBERON:0002616!1.12e-11!59;UBERON:0002346!4.00e-11!90;UBERON:0003075!4.47e-11!86;UBERON:0007284!4.47e-11!86;UBERON:0000955!6.94e-10!69;UBERON:0006238!6.94e-10!69;UBERON:0001893!1.16e-09!34;UBERON:0002020!1.17e-09!34;UBERON:0003528!1.17e-09!34;UBERON:0002791!1.36e-09!33;UBERON:0003056!3.86e-09!61;UBERON:0001869!5.03e-09!32;UBERON:0000153!5.04e-09!129;UBERON:0007811!5.04e-09!129;UBERON:0000033!2.30e-08!123;UBERON:0000956!4.54e-07!25;UBERON:0000203!4.54e-07!25;UBERON:0002619!9.96e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.95e-09;41!UBERON:0001890;2.95e-09;41!UBERON:0002791;6.31e-09;32!UBERON:0003528;1.19e-08;34!UBERON:0002020;1.19e-08;34!UBERON:0001869;1.37e-08;32!UBERON:0001893;1.45e-08;34!UBERON:0000073;7.03e-08;53!UBERON:0002616;7.03e-08;53!UBERON:0000956;2.53e-07;25!UBERON:0000203;2.53e-07;25!UBERON:0002619;6.97e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.35e-13,81;UBERON:0001049,9.96e-13,56;UBERON:0005068,9.96e-13,56;UBERON:0006241,9.96e-13,56;UBERON:0007135,9.96e-13,56;UBERON:0001016,3.37e-12,89;UBERON:0007023,4.52e-12,114;UBERON:0000073,6.10e-12,53;UBERON:0002616,6.10e-12,53;UBERON:0002780,8.07e-12,41;UBERON:0001890,8.07e-12,41;UBERON:0003080,8.07e-12,41;UBERON:0006240,8.07e-12,41;UBERON:0004121,4.45e-11,171;UBERON:0000924,4.45e-11,171;UBERON:0006601,4.45e-11,171;UBERON:0010371,6.75e-11,104;UBERON:0002346,1.71e-10,86;UBERON:0003075,1.91e-10,82;UBERON:0007284,1.91e-10,82;UBERON:0001893,1.15e-09,34;UBERON:0003528,1.16e-09,34;UBERON:0002020,1.16e-09,34;UBERON:0000955,1.29e-09,68;UBERON:0006238,1.29e-09,68;UBERON:0002791,1.88e-09,32;UBERON:0001869,5.01e-09,32;UBERON:0003056,6.28e-09,61;UBERON:0011216,9.65e-09,223;UBERON:0000956,4.53e-07,25;UBERON:0000203,4.53e-07,25;UBERON:0010314,7.55e-07,132;UBERON:0002619,9.93e-07,22 | |||
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| ||
|short_description=p1@ZNF616 | |short_description=p1@ZNF616 | ||
}} | }} |
Latest revision as of 17:06, 19 September 2015
Short description: | p1@ZNF616 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF616_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330123, NM_178523, uc002pym.2, uc002pyn.2_5end |
EntrezGene: | ZNF616 |
HGNC: | 28062 |
UniProt: | Q08AN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.35e-13 | 81 |
neural tube | 9.96e-13 | 56 |
neural rod | 9.96e-13 | 56 |
future spinal cord | 9.96e-13 | 56 |
neural keel | 9.96e-13 | 56 |
nervous system | 3.37e-12 | 89 |
adult organism | 4.52e-12 | 114 |
regional part of nervous system | 6.10e-12 | 53 |
regional part of brain | 6.10e-12 | 53 |
regional part of forebrain | 8.07e-12 | 41 |
forebrain | 8.07e-12 | 41 |
anterior neural tube | 8.07e-12 | 41 |
future forebrain | 8.07e-12 | 41 |
ectoderm-derived structure | 4.45e-11 | 171 |
ectoderm | 4.45e-11 | 171 |
presumptive ectoderm | 4.45e-11 | 171 |
ecto-epithelium | 6.75e-11 | 104 |
neurectoderm | 1.71e-10 | 86 |
neural plate | 1.91e-10 | 82 |
presumptive neural plate | 1.91e-10 | 82 |
telencephalon | 1.15e-09 | 34 |
brain grey matter | 1.16e-09 | 34 |
gray matter | 1.16e-09 | 34 |
brain | 1.29e-09 | 68 |
future brain | 1.29e-09 | 68 |
regional part of telencephalon | 1.88e-09 | 32 |
cerebral hemisphere | 5.01e-09 | 32 |
pre-chordal neural plate | 6.28e-09 | 61 |
organ system subdivision | 9.65e-09 | 223 |
cerebral cortex | 4.53e-07 | 25 |
pallium | 4.53e-07 | 25 |
structure with developmental contribution from neural crest | 7.55e-07 | 132 |
regional part of cerebral cortex | 9.93e-07 | 22 |