FFCP PHASE1:Hg19::chr5:112043283..112043340,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=583 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z2B6 | |||
|association_with_transcript=64bp_to_ENST00000507379_5end | |||
|cluster_id=chr5:112043283..112043340,+ | |||
|description=CAGE_peak_3_at_APC_5end | |||
|id=chr5:112043283..112043340,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.97e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-34!115;UBERON:0001017!8.99e-26!82;UBERON:0005743!2.37e-25!86;UBERON:0001049!5.36e-24!57;UBERON:0005068!5.36e-24!57;UBERON:0006241!5.36e-24!57;UBERON:0007135!5.36e-24!57;UBERON:0000073!5.24e-23!94;UBERON:0001016!5.24e-23!94;UBERON:0000955!6.10e-21!69;UBERON:0006238!6.10e-21!69;UBERON:0003080!8.69e-21!42;UBERON:0002780!2.96e-20!41;UBERON:0001890!2.96e-20!41;UBERON:0006240!2.96e-20!41;UBERON:0002616!6.45e-19!59;UBERON:0002020!6.18e-17!34;UBERON:0003528!6.18e-17!34;UBERON:0001893!1.36e-16!34;UBERON:0002791!2.76e-16!33;UBERON:0001869!1.47e-15!32;UBERON:0003075!1.09e-14!86;UBERON:0007284!1.09e-14!86;UBERON:0002346!7.51e-13!90;UBERON:0000956!1.74e-12!25;UBERON:0000203!1.74e-12!25;UBERON:0003056!8.96e-12!61;UBERON:0002619!2.27e-11!22;UBERON:0000153!2.53e-11!129;UBERON:0007811!2.53e-11!129;UBERON:0001950!3.79e-10!20;UBERON:0000033!3.83e-10!123;UBERON:0004121!1.74e-08!169;UBERON:0000924!1.28e-07!173;UBERON:0006601!1.28e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.41e-15;41!UBERON:0001890;2.41e-15;41!UBERON:0003528;8.00e-15;34!UBERON:0002020;8.00e-15;34!UBERON:0002791;9.21e-15;32!UBERON:0001869;1.58e-14;32!UBERON:0001893;2.26e-14;34!UBERON:0000073;1.43e-13;53!UBERON:0002616;1.43e-13;53!UBERON:0000956;8.93e-13;25!UBERON:0000203;8.93e-13;25!UBERON:0002619;1.52e-11;22!UBERON:0001950;2.61e-10;20!UBERON:0001017;6.59e-10;75!UBERON:0000955;1.18e-09;68!UBERON:0007023;2.49e-09;114!UBERON:0001016;5.08e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.69e-34,114;UBERON:0001017,3.35e-25,81;UBERON:0001049,2.04e-23,56;UBERON:0005068,2.04e-23,56;UBERON:0006241,2.04e-23,56;UBERON:0007135,2.04e-23,56;UBERON:0001016,8.59e-23,89;UBERON:0000073,1.08e-21,53;UBERON:0002616,1.08e-21,53;UBERON:0000955,2.19e-20,68;UBERON:0006238,2.19e-20,68;UBERON:0002780,2.86e-20,41;UBERON:0001890,2.86e-20,41;UBERON:0003080,2.86e-20,41;UBERON:0006240,2.86e-20,41;UBERON:0003528,6.01e-17,34;UBERON:0002020,6.01e-17,34;UBERON:0001893,1.33e-16,34;UBERON:0002791,7.37e-16,32;UBERON:0001869,1.44e-15,32;UBERON:0003075,2.18e-13,82;UBERON:0007284,2.18e-13,82;UBERON:0000956,1.70e-12,25;UBERON:0000203,1.70e-12,25;UBERON:0002346,1.38e-11,86;UBERON:0002619,2.23e-11,22;UBERON:0011216,3.27e-11,223;UBERON:0003056,7.49e-11,61;UBERON:0001950,3.74e-10,20;UBERON:0010314,1.34e-08,132;UBERON:0010371,4.19e-08,104;UBERON:0004121,2.24e-07,171;UBERON:0000924,2.24e-07,171;UBERON:0006601,2.24e-07,171 | |||
|phase1_expression=3.45188920614058,2.35510576280081,3.38290569830331,5.00366491765652,1.78784437770915,0,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,1.39560233594486,0.436882744260345,1.05506791291381,2.59909341216098,1.65698687863958,2.01697543935533,0,1.46062018077475,0.975865597581014,0.861847406537515,1.22400414746552,1.25381888591235,12.0219114595044,6.02247470320691,8.16027157366218,5.04328477936478,3.7766271146975,4.80135766013443,3.14691421479123,5.37361157336098,2.01260960310899,1.83884244895785,0,0.739508020333575,5.57763844178172,4.40724620711007,3.81680571135301,1.66198622559563,2.00544447470142,3.90619567288533,3.58264758783879,6.80176698639857,4.37878464978117,3.92575244704825,3.40088349319928,7.5201058968223,2.55671940596253,4.11167888021826,3.09706370895104,1.7261543539329,1.7931249457037,1.89185783910868,1.72372840368309,2.5819387343353,4.06279459783025,2.25890807451126,1.91034305040492,3.14612878223118,2.44867113896722,1.92557416245656,3.83602275479425,2.63881040149373,1.79517291859469,2.98357325372886,1.16083695451434,1.70215567407342,2.4912889959823,1.50749199154046,1.5644487552606,2.6062661364614,1.21079900526674,2.20966581592539,3.79754864929061,1.47878700418359,2.33864729961548,1.67726916406701,2.47122988522289,2.10247649978109,3.53596290733576,2.28010194992999,2.38700012638908,2.37463399894024,8.79981222306614,7.64594055766984,5.33705552318133,11.5217160092957,10.8106916499723,9.19603903927173,12.5598525829124,7.63243003628291,9.10740750575117,2.34894875748376,6.49864487812889,10.5737062863221,7.28661131875997,4.74091352595139,4.91774425284583,1.17903228824749,3.49522548299166,7.52339229258051,6.19252306603822,12.7830907548378,7.79306913631645,3.11949279278486,3.53527088969805,5.75988125917415,4.33286182024025,4.22701355094728,2.60118695119756,3.12432018746985,4.14525026678773,4.92665245749589,5.04174314751005,8.02622484269139,5.22677619024884,3.73920830901968,3.83220493601921,6.52892146416997,4.30133476433155,6.05274287215784,6.51083453856419,7.60361635558699,12.3471597643774,10.7508753369711,14.9916871862815,6.62976305723247,3.28451198768419,5.64498881029251,5.88368430723716,5.79297615531196,0,1.34140171940727,2.55725123687061,3.61439152384566,4.01070328508712,1.44846518960824,1.5905718941022,1.94653948121054,3.49778823507051,2.88248216701333,2.89854792787316,3.99486180268024,0,0.741568885568859,1.9472843619281,2.78607579678828,2.12732736830184,4.5313218618015,2.85997455390064,5.94332002127304,2.38514888840046,0.860234595106124,1.04142150482278,0.56530794192401,0.419499436209906,2.20094433552054,1.67195973229448,4.39308490587859,9.24992282985447,8.03329470635209,2.01414658554573,0.760272105718513,0.976248230192678,0.735326160691737,0,5.35798369704479,4.04152870727106,5.18012810223282,1.53316637465883,2.84779697870439,1.09921046358244,13.1780417436063,23.2668158488995,0.436094052142534,2.48485975847659,2.5326102332916,6.3556406790345,4.01571269048339,1.41867352879343,1.68203280042692,4.2699598291882,1.72667283892012,4.97937656639626,4.04132016209064,5.72116660897106,0.908144565869588,0,0.70296429550139,0.624320153660641,1.1409436430889,0.448346041655403,2.70099346880659,2.10434827678571,2.80901613404497,5.10385428137233,2.21101771161182,2.9964476540972,3.56400857184616,3.4617370098998,0,0.718618141816238,2.52504170931099,5.50521487436642,4.71008996323111,3.5118209670467,4.29082914118628,4.05642759047811,0.907457465280168,14.7099501264867,4.48470516518992,1.69545520927649,13.5040993237981,2.88547081867629,7.21393512127762,3.7223371266318,18.5653965465393,4.28722822709274,10.6022185182528,4.60249493211497,3.23292113637624,8.87523981291536,6.04512589365842,4.74769658469365,2.31913023795956,3.00020732649918,2.00763216772303,4.26907971453584,3.71083351300159,3.137236457477,5.28671380578389,4.28945446488568,5.47466038613745,3.12899064659632,4.5026865673502,1.38134921352481,3.25057549622385,2.16563844500876,2.01121560067735,2.36018566109342,1.44606617930089,1.98529150918309,2.17879444092406,1.18635309555548,1.34831308160164,2.35465758150415,2.69323009862473,1.4763109092493,0,0.8231480226628,0,2.53510069643662,6.87979051674338,2.36315962672562,2.6487785964879,5.65746817298322,3.43135620597051,2.41450627898976,0,1.3068766413512,2.12953423864618,0.325808305310325,0,1.44331342025273,3.82570336417754,3.28744343860301,1.01056513432752,1.38895653772983,3.23432058798817,6.3216351836742,3.43394464837949,3.44703808522356,1.17002132569619,2.22946743433092,5.62403003920662,2.51973192298289,2.1266264586358,2.23896306757121,2.90633938513962,0.383382679165211,7.38994856843915,5.01876073875388,7.04915592838625,7.63835753109896,7.5745460055828,2.60341366597893,1.52795370223311,0,0,1.7480673759565,0.901029173531752,3.71574362419752,1.34557301214433,1.74384027533312,2.0534720029866,2.71470603091333,3.57656445851882,2.535908257668,2.6593811658487,2.08014873822732,1.02882949704857,0,1.0656887160644,2.28764789853036,2.17048642156577,1.64648067356154,1.95441710576241,0.710783897485092,2.37585561880029,1.80863626235752,0.871533458600294,1.79951384127703,2.43247561282381,7.03159928004977,2.10833939483032,2.87549826589899,1.14861935834114,2.85273810081437,3.4747513600219,3.28762116080613,4.29746311775749,3.02629888782524,9.65450724989443,5.17506179662842,6.16046574142792,22.8685161800217,16.9181810014908,5.41302168944387,6.8681668787083,4.46557126157214,11.9841123831549,14.9580729602012,27.3514238867783,2.20844685094452,0.500170521059677,2.17012018959788,3.53550464602372,2.14114786556594,3.15404830067869,5.27136367467209,1.80567659836631,4.5481500811197,2.0694614258501,3.32112799267718,1.29058417979192,3.73599542212756,0.391602314925481,1.37257369524342,6.82334486205528,4.52999821719095,5.01619521676188,1.81876542867756,1.66435439510497,1.81434175997808,1.98486246255021,8.74733247741956,3.36792113319688,1.28139149255701,2.55853624533352,3.37793234401576,0,1.85051632563187,0.177561725313127,2.29956036838666,2.59627214591811,0.929683027679674,3.38406458856542,2.6065841139427,0.920809889358963,2.06666006696292,1.82091168006717,1.57349297951309,1.35359883872224,2.84956747286335,1.56869953835371,0,3.4832037534649,1.13733384070897,1.19065593693561,1.51141141271498,3.08454505380579,1.35473218771926,1.50506932156456,0.764628819135115,1.66215201785745,1.11937377361089,2.41185864310528,2.3529190592241,4.35965212697862,1.96808787419823,3.25378394664303,6.18246069886334,2.65551447973196,3.54790849658528,0,0,1.6068392984416,2.99679226705578,2.7728751080636,3.83759186815324,2.61889487720608,2.36324538710202,4.0604674295984,3.15338521439573,5.51998621009772,1.4875642382488,1.92190067365106,8.67766444963172,2.023155617111,0.464845549297286,7.870308670766,2.0911118104818,2.15623506123262,1.06461206063404,3.47973196830029,1.66791797193528,3.00562262158182,2.60510858551767,4.42931194606216,2.66882271493355,0,2.56763392820352,0.95460974377781,3.13979456079692,1.97859703341646,4.11805544604082,2.47406044925942,1.81964233415984,3.17020642346017,2.94880919367287,0,1.46228093778771,1.05650146756755,4.50449707646353,1.27264888758341,2.26016233240486,3.85955740482287,3.98063385144732,0.876901770507525,0.578775534266688,3.9353685122798,1.01455188481352,1.239293992399,1.12678241012897,3.15504974848913,2.94747123039363,0,3.19284957663538,2.11107635297664,0.658589785919804,1.13841952129715,0.349934720244983,0.962221127255121,2.01090682660736,0,5.83691564816031,0.43050537267123,0,1.33029046061003,1.37834040124176,10.1489521846434,11.4695581071356,7.97506062043828,7.38518503919146,7.81588318863769,9.07862635669804,12.4207230564766,7.9312517629427,4.3797869162264,2.88743956579008,1.71528151186722,7.24632382990303,2.59684583357601,4.76650350434375,2.07254154547469,0.399158742865633,1.7235483311913,1.90506224451495,4.22008522356922,3.08876895924805,2.05411211129873,0.156679895773023,5.01268954180134,4.40158622284169,1.4452926759333,2.42159648629257,3.40676990152261,2.74804275804612,1.22896305723383,1.11838053946208,2.16903884225481,0.781552381608161,6.40334199959057,4.92349595790849,1.08182271390393,3.99686361597384,11.278960407028,2.05854594449042,8.05794985995417,2.30584991324076,3.56618829687931,6.25099522974109,2.3874448473769,3.26661148915902,0.921482106297696,13.9180670687282,17.4430076349036,2.78271762557265,2.96646973608167,13.9342769364476,5.77819165928102,7.45966571934099,11.840839149151,7.26107645765299,2.58478091468246,1.24415835064723,4.22381250392436,0.537063524026827,1.02314474045374,6.80639498894842,4.7896618469388,6.66821940867821,9.69332746095218,10.2972588959655,19.9613798001194,4.16684417736373,5.42251999976413,10.8749936315219,3.86897724170699,2.54253650292766,4.49136595359079,1.37897349296586,1.74962768029953,10.2438747010642,9.74315524395223,15.7981334599284,12.2065389053667,12.0531393325035,11.5263571391884,13.6018946235463,3.15921544205071,11.4327470308455,11.0808372245468,2.84855139617503,5.7640976097015,6.55230804191337,5.10642648033438,2.55200927785536,3.93869651628008,3.73124343213044,0,0.470940769185074,1.49590513710141,2.70714792740617,2.74487548044835,3.18861015254101,2.84630599086278,3.81447789552909,2.10998064528027,2.28525931422807,3.25112064298064,5.19332735381019,5.97157158647103,8.5803837568239,10.9985426088053,4.44781693020933,2.10058696209055,2.40170483862547,8.89694955344937,5.61804353109152,9.60484227473891,3.10173141666632,4.10895699757388,4.61282721114776,6.31335044559025,12.0990716048664,14.385419796633,6.3186579628488,8.86908174545506,6.11760329243758,2.65861549082874,3.97190347050599,3.7671950208867,8.36307008410712,3.13070500632772,2.91216813327591,4.5125531967134,2.25382514053069,4.00472350269852,5.2418000472609,2.75177651954586,5.12808555832151,5.26243083020536,5.58385107961823,5.14041787388623,7.23700238870302,9.49119111278236,1.64450309576101,3.17943378724783,10.8261461084553,3.51992488922645,3.84762337207362,5.97668385270187,4.59562102038899,3.31407959454444,3.55063448114339,8.57974989309823,1.87271237384595,6.95814199166422,2.35694034616795,3.94122197613481,4.18411385249333,5.30390731708873,3.75635766871975,6.60462317580768,11.5000518269274,8.94226116468806,4.29765441419957,0.788662062837943,10.3334488470734,8.70809611244398,3.58936512288407,2.39614800598789,4.29226048136571,6.24880080837243,7.86046628094697,2.88239906833923,2.32991899054908,4.09672547997563,4.20320877743949,4.85305515750131,5.61036644634068,2.28617996577618,12.7236750369489,19.0684768556206,3.85807556316046,6.46435352006999,7.47792608452533,2.92466059016951,2.32140586367385,9.29468216867777,1.34173875039706,6.61967941313265,7.60591527957473,6.75842153724202,1.79287339332845,5.18171032762502,5.71756261098694,8.60719561475061,2.28841683889275,2.71499800876856,2.5926644736038,0.653174720218818,3.59190574687462,3.44788587147224,3.57814845749386,9.40490359617043,3.22414914091781,1.32506888912221,10.6012024216471,12.5620971655555,3.93499727133958,3.52407511158336,5.9800951037909,17.4496778660629,5.79934677486074,8.43482237080316,1.7785046870815,2.55764456599881,2.55336503108073,3.80812462358632,4.5124180924086,3.982492497925,7.86894313703531,2.98402782875445,7.97461361970287,5.85726071529423,11.8931384171175,12.0415931094915,12.9786990298117,9.3765568441489,4.56550495289562,3.99937305478741,3.63957882099955,3.14011866899464,3.52898729547258,2.34167452903441,2.02889440055155,0.895528817321244,0.701139929541673,1.66441758450784,1.89403005275089,4.77979013329893,1.77962244319307,1.83072054717539,0.756154618816195,3.88593001456951,3.40066844976158,2.86734180894664,3.14862178514523,2.79473322377267,2.48823724704513,1.86089200190596,3.65221543268214,3.90669783392768,2.28483127301277,5.69619026486526,5.27361111687422,3.00749559718968,2.32016879939247,4.77715066438339,1.20008329398946,1.03018711554838,1.6837474438296,6.30924491143255,5.00811559058989,0.857766365499703,1.30497145982606,3.62729480819636,1.62065732026684,2.93684045407761,3.04451029838529,0.926404341482917,1.09642024789354,4.41722864864703,2.31496845925098,1.35153952522458,2.56241518587947,3.10887307558079,1.21543982470953,10.784158019835,6.43039019169982,4.11881004971426,7.52400813576883,4.58653788384978,2.21195617878347,3.38099397373803,1.79988656269437,2.66729324235352,3.44429959321631,2.83757976783418,4.23443685579234,0.839277046316667,1.24415452006595,12.6615427590615,10.5668315168748,2.04445724412665,6.88020720609688,1.52759276958623,3.61377364172861,1.11542187833102,0,4.13405655849444,9.06910067514413,7.20513673456923,1.76337971845342,1.8374728641192,9.76284221466185,4.25089728976755,13.4092441608007,9.02512002659322,19.661592305294,5.67089470206587,8.07378228159256,1.42769420259154,3.33702242903487,2.47736419030255,2.75142897782519,2.19498765685643,3.05105676373734,4.8325194824207,6.36531910772079,7.29540184987795,3.22728109925632,1.56302802246618,3.92860041722134,3.76675410273223,4.73139475894545,7.22652155416823,6.24862478891078,12.1945209935699,6.40499682958459,19.6910931246559,2.74128883428591,4.96211178389294,0.879356221798103,3.44958554626907,8.57122937405259,14.7964837776283,7.28358725083958,12.2937583329701,2.57236873471653,2.18944576355981,6.85952037749674,12.506430867737,6.05109516778212,5.67330436243047,5.45033869271139,7.77081619220089,8.1700106756321,1.68163297988273,23.7421267332469,4.53447941559105,7.6440270061928,10.6500050823218,6.32054446930906,2.67355278346688,6.60661434749802,1.60342272946051,1.65772931330429,2.21934020222135,2.76503864725637,5.16272830584333,2.01164401241961,1.78948149994231,4.65725755210022,2.97838929107265,2.17144469965024,2.8666168169323,8.27730195303663,3.04265724207253,1.34109717480496,7.12171720906684,4.41450069481862,5.799072156691,7.77137588894623,4.2109103423179,6.76432635548652,3.44868263254949,4.85668152767528,4.50756118656259,5.1327366812669,8.48915739187391,5.46398901259893,3.29222107453066,8.58019126138669,6.83461986594715,11.1895826255519,10.9907168121022,16.4835733757526,2.20905249094162,6.20293858667034,6.18795724546341,2.89829352182294,3.21397089490184,4.94052820401969,3.12941330087756,6.57302749421866,5.96348068425903,12.9005624836306,5.36423311456828,6.25521709756415,16.144975542594,11.1095636508234,1.48798007266701,0,1.29787968637137,3.40649347054713,2.4038425832013,5.70143254551466,2.75369840303351,2.40495664739004,2.48116228744081,1.0028301571695,3.33426272160253,2.67964130156179,14.0958804707992,13.0325574785988,6.18378547512845,10.7128994158683,10.657170122941,13.532287716497,3.70035146516024,5.41000845364402,7.27621880249589,5.00748520163011,7.52913262387618,5.05140397609406,5.88122084219946,5.65522606128223,4.96559938526944,2.66818364694289,3.8614456457388,4.58108530743593,7.03922827210363,10.6350056439094,8.95171592294625,11.3178651611537,10.4662372667334,3.52625341533556 | |||
|short_description=p3@APC | |||
}} |
Latest revision as of 18:04, 19 September 2015
Short description: | p3@APC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APC_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000507379_5end |
EntrezGene: | APC |
HGNC: | 583 |
UniProt: | B7Z2B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data