FFCP PHASE1:Hg19::chr19:54369560..54369571,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:54369560..54369571,+
|short_description=p22@MYADM
|description=CAGE_peak_22_at_MYADM_5end
|association_with_transcript=-39bp_to_ENST00000336967,NM_0010208...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=-39bp_to_ENST00000336967,NM_001020820,uc002qcl.2_5end | |||
|cluster_id=chr19:54369560..54369571,+ | |||
|description=CAGE_peak_22_at_MYADM_5end | |||
|id=chr19:54369560..54369571,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.04e-15!42;CL:0000860!2.22e-14!45;CL:0000766!2.08e-09!76;CL:0000557!3.52e-08!71;CL:0000839!7.95e-08!70;CL:0002009!5.58e-07!65;CL:0002194!5.63e-07!63;CL:0000576!5.63e-07!63;CL:0000040!5.63e-07!63;CL:0000559!5.63e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-27;33!CL:0002057;2.87e-27;33!CL:0000473;4.00e-18;39!CL:0000234;4.00e-18;39!CL:0000576;8.60e-13;48!CL:0000766;1.00e-11;69!CL:0000767;7.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.21e-25,42;CL:0002057,5.21e-25,42;CL:0000766,3.89e-21,72;CL:0000473,6.25e-21,48;CL:0000234,6.25e-21,48;CL:0000557,4.53e-18,67;CL:0000839,4.15e-17,66;CL:0002009,7.71e-16,61;CL:0002194,2.85e-15,59;CL:0000576,2.85e-15,59;CL:0000040,2.85e-15,59;CL:0000559,2.85e-15,59;CL:0000738,2.40e-12,136;CL:0000763,5.21e-12,108;CL:0000049,5.21e-12,108;CL:0002031,1.82e-10,120;CL:0002087,1.09e-08,115;CL:0002032,2.74e-08,161;CL:0000837,2.74e-08,161;CL:0000037,3.88e-08,168;CL:0000767,8.48e-08,3;CL:0000988,2.93e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.96e-13!57;UBERON:0005068!2.96e-13!57;UBERON:0006241!2.96e-13!57;UBERON:0007135!2.96e-13!57;UBERON:0001017!6.70e-13!82;UBERON:0005743!1.50e-11!86;UBERON:0000955!1.55e-11!69;UBERON:0006238!1.55e-11!69;UBERON:0001950!3.16e-11!20;UBERON:0002616!4.38e-11!59;UBERON:0002619!8.97e-11!22;UBERON:0000073!1.76e-10!94;UBERON:0001016!1.76e-10!94;UBERON:0002204!2.33e-10!167;UBERON:0002020!3.11e-10!34;UBERON:0003528!3.11e-10!34;UBERON:0001893!3.56e-10!34;UBERON:0001869!7.46e-10!32;UBERON:0002780!9.07e-10!41;UBERON:0001890!9.07e-10!41;UBERON:0006240!9.07e-10!41;UBERON:0002791!1.30e-09!33;UBERON:0003080!3.29e-09!42;UBERON:0003075!1.76e-08!86;UBERON:0007284!1.76e-08!86;UBERON:0000956!2.47e-08!25;UBERON:0000203!2.47e-08!25;UBERON:0002371!3.63e-08!80;UBERON:0002346!6.25e-08!90;UBERON:0000467!6.83e-07!625;UBERON:0001474!6.84e-07!86;UBERON:0004765!6.98e-07!101;UBERON:0001434!6.98e-07!101;UBERON:0000480!9.36e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.85e-19;22!UBERON:0001950;1.80e-18;20!UBERON:0001893;2.10e-16;34!UBERON:0000956;3.37e-16;25!UBERON:0000203;3.37e-16;25!UBERON:0001869;6.17e-16;32!UBERON:0003528;1.02e-15;34!UBERON:0002020;1.02e-15;34!UBERON:0002791;5.63e-14;32!UBERON:0002780;8.84e-12;41!UBERON:0001890;8.84e-12;41!UBERON:0000200;9.48e-12;6!UBERON:0000073;3.46e-10;53!UBERON:0002616;3.46e-10;53!UBERON:0000955;1.59e-08;68!UBERON:0002298;2.69e-08;6!UBERON:0001017;4.01e-07;75!UBERON:0001870;5.87e-07;3!UBERON:0000988;7.65e-07;3!UBERON:0001872;7.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.02e-19,22;UBERON:0001950,4.27e-19,20;UBERON:0001049,7.69e-19,56;UBERON:0005068,7.69e-19,56;UBERON:0006241,7.69e-19,56;UBERON:0007135,7.69e-19,56;UBERON:0003528,1.34e-18,34;UBERON:0002020,1.34e-18,34;UBERON:0000073,1.82e-18,53;UBERON:0002616,1.82e-18,53;UBERON:0001893,1.85e-18,34;UBERON:0001869,6.38e-18,32;UBERON:0000955,8.37e-18,68;UBERON:0006238,8.37e-18,68;UBERON:0000956,1.17e-16,25;UBERON:0000203,1.17e-16,25;UBERON:0001017,3.31e-16,81;UBERON:0002780,3.61e-16,41;UBERON:0001890,3.61e-16,41;UBERON:0003080,3.61e-16,41;UBERON:0006240,3.61e-16,41;UBERON:0002371,3.74e-16,76;UBERON:0002791,7.49e-16,32;UBERON:0001016,6.82e-15,89;UBERON:0001474,2.26e-14,82;UBERON:0004765,2.22e-12,90;UBERON:0000200,4.68e-12,6;UBERON:0002405,1.00e-11,93;UBERON:0003075,1.24e-11,82;UBERON:0007284,1.24e-11,82;UBERON:0002390,1.34e-11,98;UBERON:0003061,1.34e-11,98;UBERON:0001434,2.49e-11,100;UBERON:0002346,9.27e-11,86;UBERON:0002204,2.94e-10,167;UBERON:0003056,3.25e-10,61;UBERON:0002193,8.64e-10,108;UBERON:0002298,4.82e-08,6;UBERON:0007023,5.11e-08,114;UBERON:0010371,1.04e-07,104;UBERON:0010314,1.06e-07,132;UBERON:0001872,4.65e-07,5;UBERON:0001870,5.38e-07,3 | |||
|phase1_expression=0.908391896352783,0.428201047781966,1.12763523276777,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,1.34465029290355,0,0.730310090387373,0,0.369363174230364,0.204000691244253,0.626909442956176,0,0,0,0,0,0,3.14691421479123,2.30297638858328,2.47705797305722,0,0,0,0,0,0.293600439334847,0,1.20326668482085,1.51907609501096,0,0,0,2.61716829803216,1.88937971844405,2.66842467306598,3.0215774797739,1.23350366406548,2.47765096716083,0.863077176966451,1.2808035326455,1.18241114944293,1.37898272294647,2.5819387343353,4.06279459783025,1.69418105588344,1.36453075028923,1.12361742222542,2.44867113896722,2.56743221660875,3.19668562899521,0.329851300186716,1.19678194572979,1.27867425159808,2.03146467040009,2.8369261234557,0.622822248995575,0.502497330513487,0.521482918420201,0.434377689410233,1.81619850790011,1.84138817993782,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0.590129310341499,1.17903228824749,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,1.20964045934839,1.60464117470104,0.579297615531196,2.43806866313962,1.34140171940727,0.255725123687061,1.44575660953827,1.00267582127178,0.289693037921647,1.5905718941022,1.45990461090791,0.283604451492204,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.926864265692532,2.0078563452417,0.709336764396714,0.560677600142307,0,1.2333377420858,0,0.134710672069688,0,0.302714855289863,1.15235184896,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0.717558542755448,0,0.423863802319124,1.50045548042201,0.309157587715317,1.03056216018252,0,0.675105328965065,0.389748020644795,0.504867548488229,0.368199594569197,0.646584227275248,0.710019185033229,0.302256294682921,0,0,0,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0,0.179117045405697,0,0,0.985326475791887,0.176096868026452,2.28060927094849,1.44119953416961,1.76739406796932,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.205476322550383,0.358121926479791,0,0.788123040807709,3.01878604803324,1.02674429023799,0,1.30139853857622,0,0.502548796003046,0,1.49801404789436,0,0.414415513436035,0.36807447515742,0,0,1.24782516918484,0.713715955188647,0.157702415033935,0.937131319941706,0,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0.391602314925481,0.343143423810856,0.206768026122887,1.07857100409308,0.533637789017222,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.512556597022804,0.511707249066704,0.321707842287215,0,0.308419387605311,0.177561725313127,0.657017248110473,0.519254429183621,0.464841513839837,0,0,0,0,0.546273504020151,0.131124414959424,0,0.308061348417659,0.784349769176855,0,0.105551628892876,1.13733384070897,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,1.25671933779759,0.462145851343933,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0,0,3.1481234683064,0.6970372701606,0.616067160352178,0.532306030317022,0,0.9266210955196,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,2.35484592059769,0,0,0.235624804691373,1.01091240786658,0,0.421258456238981,0.975267478179181,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0.655894752046633,0.811641507850816,0,0.563391205064483,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,0.329294892959902,0,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0.994147647766298,1.40669416410513,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.09864340563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|phase1_expression=0.908391896352783,0.428201047781966,1.12763523276777,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,1.34465029290355,0,0.730310090387373,0,0.369363174230364,0.204000691244253,0.626909442956176,0,0,0,0,0,0,3.14691421479123,2.30297638858328,2.47705797305722,0,0,0,0,0,0.293600439334847,0,1.20326668482085,1.51907609501096,0,0,0,2.61716829803216,1.88937971844405,2.66842467306598,3.0215774797739,1.23350366406548,2.47765096716083,0.863077176966451,1.2808035326455,1.18241114944293,1.37898272294647,2.5819387343353,4.06279459783025,1.69418105588344,1.36453075028923,1.12361742222542,2.44867113896722,2.56743221660875,3.19668562899521,0.329851300186716,1.19678194572979,1.27867425159808,2.03146467040009,2.8369261234557,0.622822248995575,0.502497330513487,0.521482918420201,0.434377689410233,1.81619850790011,1.84138817993782,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0.590129310341499,1.17903228824749,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,1.20964045934839,1.60464117470104,0.579297615531196,2.43806866313962,1.34140171940727,0.255725123687061,1.44575660953827,1.00267582127178,0.289693037921647,1.5905718941022,1.45990461090791,0.283604451492204,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.926864265692532,2.0078563452417,0.709336764396714,0.560677600142307,0,1.2333377420858,0,0.134710672069688,0,0.302714855289863,1.15235184896,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0.717558542755448,0,0.423863802319124,1.50045548042201,0.309157587715317,1.03056216018252,0,0.675105328965065,0.389748020644795,0.504867548488229,0.368199594569197,0.646584227275248,0.710019185033229,0.302256294682921,0,0,0,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0,0.179117045405697,0,0,0.985326475791887,0.176096868026452,2.28060927094849,1.44119953416961,1.76739406796932,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.205476322550383,0.358121926479791,0,0.788123040807709,3.01878604803324,1.02674429023799,0,1.30139853857622,0,0.502548796003046,0,1.49801404789436,0,0.414415513436035,0.36807447515742,0,0,1.24782516918484,0.713715955188647,0.157702415033935,0.937131319941706,0,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0.391602314925481,0.343143423810856,0.206768026122887,1.07857100409308,0.533637789017222,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.512556597022804,0.511707249066704,0.321707842287215,0,0.308419387605311,0.177561725313127,0.657017248110473,0.519254429183621,0.464841513839837,0,0,0,0,0.546273504020151,0.131124414959424,0,0.308061348417659,0.784349769176855,0,0.105551628892876,1.13733384070897,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,1.25671933779759,0.462145851343933,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0,0,3.1481234683064,0.6970372701606,0.616067160352178,0.532306030317022,0,0.9266210955196,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,2.35484592059769,0,0,0.235624804691373,1.01091240786658,0,0.421258456238981,0.975267478179181,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0.655894752046633,0.811641507850816,0,0.563391205064483,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,0.329294892959902,0,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0.994147647766298,1.40669416410513,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.09864340563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| ||
|short_description=p22@MYADM | |||
}} | }} |
Latest revision as of 19:46, 19 September 2015
Short description: | p22@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_MYADM_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000336967, NM_001020820, uc002qcl.2_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.21e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.21e-25 | 42 |
myeloid leukocyte | 3.89e-21 | 72 |
defensive cell | 6.25e-21 | 48 |
phagocyte | 6.25e-21 | 48 |
granulocyte monocyte progenitor cell | 4.53e-18 | 67 |
myeloid lineage restricted progenitor cell | 4.15e-17 | 66 |
macrophage dendritic cell progenitor | 7.71e-16 | 61 |
monopoietic cell | 2.85e-15 | 59 |
monocyte | 2.85e-15 | 59 |
monoblast | 2.85e-15 | 59 |
promonocyte | 2.85e-15 | 59 |
leukocyte | 2.40e-12 | 136 |
myeloid cell | 5.21e-12 | 108 |
common myeloid progenitor | 5.21e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.82e-10 | 120 |
nongranular leukocyte | 1.09e-08 | 115 |
hematopoietic oligopotent progenitor cell | 2.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-08 | 161 |
hematopoietic stem cell | 3.88e-08 | 168 |
basophil | 8.48e-08 | 3 |
hematopoietic cell | 2.93e-07 | 177 |