FFCP PHASE1:Hg19::chr7:91509986..91510046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7978 | |EntrezGene=7978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21463 | |HGNC=21463 | ||
|TSSclassifier=strong | |||
|UniProt=Q99551,B4DPR9,C9JE25,C9JNM8 | |UniProt=Q99551,B4DPR9,C9JE25,C9JNM8 | ||
|association_with_transcript=0bp_to_ENST00000351870,ENST00000406735,ENST00000419292,ENST00000442961,ENST00000454222,ENST00000456229,NM_006980,uc003ulc.1,uc010let.1,uc010leu.1,uc011khm.1_5end | |association_with_transcript=0bp_to_ENST00000351870,ENST00000406735,ENST00000419292,ENST00000442961,ENST00000454222,ENST00000456229,NM_006980,uc003ulc.1,uc010let.1,uc010leu.1,uc011khm.1_5end | ||
|cluster_id=chr7:91509986..91510046,- | |||
|description=CAGE_peak_1_at_MTERF_5end | |description=CAGE_peak_1_at_MTERF_5end | ||
|id=chr7:91509986..91510046,- | |id=chr7:91509986..91510046,- | ||
|ontology_enrichment_celltype=CL:0000542!7.39e-14!53;CL:0000051!7.39e-14!53;CL:0000838!2.17e-13!52;CL:0000945!4.00e-08!24;CL:0000826!4.00e-08!24 | |ontology_enrichment_celltype=CL:0000542!7.39e-14!53;CL:0000051!7.39e-14!53;CL:0000838!2.17e-13!52;CL:0000945!4.00e-08!24;CL:0000826!4.00e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.76e-08;53!CL:0000945;3.80e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.28e-14,53;CL:0000051,7.28e-14,53;CL:0000838,2.14e-13,52;CL:0000945,3.93e-08,24;CL:0000826,3.93e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.76e-08;53!UBERON:0006601;3.59e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.42e-16!82;UBERON:0000073!2.68e-16!94;UBERON:0001016!2.68e-16!94;UBERON:0001049!6.58e-16!57;UBERON:0005068!6.58e-16!57;UBERON:0006241!6.58e-16!57;UBERON:0007135!6.58e-16!57;UBERON:0005743!1.23e-15!86;UBERON:0002780!4.07e-15!41;UBERON:0001890!4.07e-15!41;UBERON:0006240!4.07e-15!41;UBERON:0003080!2.06e-14!42;UBERON:0000955!4.27e-14!69;UBERON:0006238!4.27e-14!69;UBERON:0007023!4.72e-14!115;UBERON:0002616!2.24e-13!59;UBERON:0002020!1.16e-12!34;UBERON:0003528!1.16e-12!34;UBERON:0001893!1.26e-12!34;UBERON:0002791!3.34e-12!33;UBERON:0001869!9.81e-12!32;UBERON:0002346!4.26e-11!90;UBERON:0000153!1.13e-10!129;UBERON:0007811!1.13e-10!129;UBERON:0003075!5.48e-10!86;UBERON:0007284!5.48e-10!86;UBERON:0000033!1.49e-09!123;UBERON:0000924!3.78e-09!173;UBERON:0006601!3.78e-09!173;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0003056!1.60e-08!61;UBERON:0004121!2.79e-08!169;UBERON:0002619!1.10e-07!22 | |ontology_enrichment_uberon=UBERON:0001017!2.42e-16!82;UBERON:0000073!2.68e-16!94;UBERON:0001016!2.68e-16!94;UBERON:0001049!6.58e-16!57;UBERON:0005068!6.58e-16!57;UBERON:0006241!6.58e-16!57;UBERON:0007135!6.58e-16!57;UBERON:0005743!1.23e-15!86;UBERON:0002780!4.07e-15!41;UBERON:0001890!4.07e-15!41;UBERON:0006240!4.07e-15!41;UBERON:0003080!2.06e-14!42;UBERON:0000955!4.27e-14!69;UBERON:0006238!4.27e-14!69;UBERON:0007023!4.72e-14!115;UBERON:0002616!2.24e-13!59;UBERON:0002020!1.16e-12!34;UBERON:0003528!1.16e-12!34;UBERON:0001893!1.26e-12!34;UBERON:0002791!3.34e-12!33;UBERON:0001869!9.81e-12!32;UBERON:0002346!4.26e-11!90;UBERON:0000153!1.13e-10!129;UBERON:0007811!1.13e-10!129;UBERON:0003075!5.48e-10!86;UBERON:0007284!5.48e-10!86;UBERON:0000033!1.49e-09!123;UBERON:0000924!3.78e-09!173;UBERON:0006601!3.78e-09!173;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0003056!1.60e-08!61;UBERON:0004121!2.79e-08!169;UBERON:0002619!1.10e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.76e-11;41!UBERON:0001890;3.76e-11;41!UBERON:0001893;4.57e-11;34!UBERON:0003528;5.46e-11;34!UBERON:0002020;5.46e-11;34!UBERON:0002791;7.39e-11;32!UBERON:0001869;1.22e-10;32!UBERON:0000073;2.36e-10;53!UBERON:0002616;2.36e-10;53!UBERON:0000956;1.65e-08;25!UBERON:0000203;1.65e-08;25!UBERON:0002619;1.22e-07;22!UBERON:0000955;5.90e-07;68!UBERON:0001016;6.20e-07;83!UBERON:0001017;8.21e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.01e-17,89;UBERON:0001017,7.98e-17,81;UBERON:0001049,1.61e-16,56;UBERON:0005068,1.61e-16,56;UBERON:0006241,1.61e-16,56;UBERON:0007135,1.61e-16,56;UBERON:0000073,1.03e-15,53;UBERON:0002616,1.03e-15,53;UBERON:0002780,4.07e-15,41;UBERON:0001890,4.07e-15,41;UBERON:0003080,4.07e-15,41;UBERON:0006240,4.07e-15,41;UBERON:0000955,1.40e-14,68;UBERON:0006238,1.40e-14,68;UBERON:0007023,1.24e-13,114;UBERON:0003528,1.16e-12,34;UBERON:0002020,1.16e-12,34;UBERON:0001893,1.26e-12,34;UBERON:0002791,6.84e-12,32;UBERON:0001869,9.81e-12,32;UBERON:0002346,1.24e-10,86;UBERON:0003075,1.57e-09,82;UBERON:0007284,1.57e-09,82;UBERON:0003056,3.19e-09,61;UBERON:0011216,7.81e-09,223;UBERON:0004121,9.29e-09,171;UBERON:0000924,9.29e-09,171;UBERON:0006601,9.29e-09,171;UBERON:0000956,1.54e-08,25;UBERON:0000203,1.54e-08,25;UBERON:0002619,1.10e-07,22;UBERON:0010371,7.26e-07,104 | |||
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| ||
|short_description=p1@MTERF | |short_description=p1@MTERF | ||
}} | }} |
Latest revision as of 23:03, 19 September 2015
Short description: | p1@MTERF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTERF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000351870, ENST00000406735, ENST00000419292, ENST00000442961, ENST00000454222, ENST00000456229, NM_006980, uc003ulc.1, uc010let.1, uc010leu.1, uc011khm.1_5end |
EntrezGene: | MTERF |
HGNC: | 21463 |
UniProt: | Q99551B4DPR9C9JE25C9JNM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.28e-14 | 53 |
common lymphoid progenitor | 7.28e-14 | 53 |
lymphoid lineage restricted progenitor cell | 2.14e-13 | 52 |
lymphocyte of B lineage | 3.93e-08 | 24 |
pro-B cell | 3.93e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.01e-17 | 89 |
central nervous system | 7.98e-17 | 81 |
neural tube | 1.61e-16 | 56 |
neural rod | 1.61e-16 | 56 |
future spinal cord | 1.61e-16 | 56 |
neural keel | 1.61e-16 | 56 |
regional part of nervous system | 1.03e-15 | 53 |
regional part of brain | 1.03e-15 | 53 |
regional part of forebrain | 4.07e-15 | 41 |
forebrain | 4.07e-15 | 41 |
anterior neural tube | 4.07e-15 | 41 |
future forebrain | 4.07e-15 | 41 |
brain | 1.40e-14 | 68 |
future brain | 1.40e-14 | 68 |
adult organism | 1.24e-13 | 114 |
brain grey matter | 1.16e-12 | 34 |
gray matter | 1.16e-12 | 34 |
telencephalon | 1.26e-12 | 34 |
regional part of telencephalon | 6.84e-12 | 32 |
cerebral hemisphere | 9.81e-12 | 32 |
neurectoderm | 1.24e-10 | 86 |
neural plate | 1.57e-09 | 82 |
presumptive neural plate | 1.57e-09 | 82 |
pre-chordal neural plate | 3.19e-09 | 61 |
organ system subdivision | 7.81e-09 | 223 |
ectoderm-derived structure | 9.29e-09 | 171 |
ectoderm | 9.29e-09 | 171 |
presumptive ectoderm | 9.29e-09 | 171 |
cerebral cortex | 1.54e-08 | 25 |
pallium | 1.54e-08 | 25 |
regional part of cerebral cortex | 1.10e-07 | 22 |
ecto-epithelium | 7.26e-07 | 104 |