FFCP PHASE1:Hg19::chr12:67072851..67072883,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:67072851..67072883,-
|short_description=p2@GRIP1
|description=CAGE_peak_2_at_GRIP1_5end
|association_with_transcript=41bp_to_ENST00000286445,ENST000003597...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23426 | |EntrezGene=23426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18708 | |HGNC=18708 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3R0,F5H4N6 | |UniProt=Q9Y3R0,F5H4N6 | ||
|association_with_transcript=41bp_to_ENST00000286445,ENST00000359742,ENST00000538211,NM_001178074,NM_021150,uc001stk.2,uc001stm.2_5end | |||
|cluster_id=chr12:67072851..67072883,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_GRIP1_5end | |||
|id=chr12:67072851..67072883,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.07e-10;1!CL:0000164;2.07e-10;1!CL:0000502;2.07e-10;1!CL:0000172;2.07e-10;1!CL:0000173;2.07e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.16e-10,1;CL:0000164,2.16e-10,1;CL:0000502,2.16e-10,1;CL:0000172,2.16e-10,1;CL:0000173,2.16e-10,1;CL:0002351,2.16e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.23e-27;3!UBERON:0003057;8.23e-27;3!CL:0002351;2.07e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.07e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.16e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.74e-62!57;UBERON:0005068!5.74e-62!57;UBERON:0006241!5.74e-62!57;UBERON:0007135!5.74e-62!57;UBERON:0001017!2.31e-55!82;UBERON:0005743!7.88e-55!86;UBERON:0000073!3.86e-51!94;UBERON:0001016!3.86e-51!94;UBERON:0002616!3.99e-49!59;UBERON:0000955!2.07e-45!69;UBERON:0006238!2.07e-45!69;UBERON:0002780!2.97e-45!41;UBERON:0001890!2.97e-45!41;UBERON:0006240!2.97e-45!41;UBERON:0003080!5.14e-44!42;UBERON:0003075!2.50e-42!86;UBERON:0007284!2.50e-42!86;UBERON:0002346!5.49e-40!90;UBERON:0002020!1.66e-36!34;UBERON:0003528!1.66e-36!34;UBERON:0001893!3.96e-36!34;UBERON:0002791!5.79e-34!33;UBERON:0001869!5.48e-32!32;UBERON:0001950!1.76e-30!20;UBERON:0007023!2.45e-30!115;UBERON:0003056!2.82e-30!61;UBERON:0002619!1.84e-27!22;UBERON:0000033!8.65e-26!123;UBERON:0004121!7.43e-25!169;UBERON:0000153!4.01e-24!129;UBERON:0007811!4.01e-24!129;UBERON:0000924!5.14e-24!173;UBERON:0006601!5.14e-24!173;UBERON:0000956!8.31e-24!25;UBERON:0000203!8.31e-24!25;UBERON:0003076!2.09e-18!15;UBERON:0003057!2.09e-18!15;UBERON:0002298!1.15e-17!8;UBERON:0002308!1.60e-14!9;UBERON:0000125!1.60e-14!9;UBERON:0001872!2.93e-14!5;UBERON:0000025!4.23e-13!194;UBERON:0004733!2.34e-11!12;UBERON:0002028!2.34e-11!12;UBERON:0007277!2.34e-11!12;UBERON:0000200!2.86e-11!6;UBERON:0001894!1.75e-10!7;UBERON:0006222!1.75e-10!7;UBERON:0004732!2.15e-10!13;UBERON:0002240!3.49e-10!3;UBERON:0001896!4.43e-10!3;UBERON:0005290!4.43e-10!3;UBERON:0010096!4.43e-10!3;UBERON:0004111!5.05e-10!241;UBERON:0000988!8.00e-10!3;UBERON:0009663!1.43e-09!7;UBERON:0006331!2.33e-09!3;UBERON:0002021!3.54e-09!5;UBERON:0002771!7.99e-09!3;UBERON:0000475!8.23e-09!365;UBERON:0001871!1.73e-08!7;UBERON:0000483!6.57e-08!309;UBERON:0000119!9.84e-08!312;UBERON:0000477!1.65e-07!286;UBERON:0003296!2.07e-07!4;UBERON:0010133!2.07e-07!4;UBERON:0002420!2.28e-07!9;UBERON:0007245!2.28e-07!9;UBERON:0010009!2.28e-07!9;UBERON:0010011!2.28e-07!9;UBERON:0000454!2.28e-07!9;UBERON:0002148!3.64e-07!2;UBERON:0009662!3.64e-07!2;UBERON:0000007!4.35e-07!2;UBERON:0001875!7.58e-07!2;UBERON:0006514!7.58e-07!2;UBERON:0001897!9.55e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.09e-35;6!UBERON:0002240;8.23e-27;3!UBERON:0005174;8.23e-27;3!UBERON:0001137;8.23e-27;3!UBERON:0001896;2.35e-26;3!UBERON:0005290;2.35e-26;3!UBERON:0002148;2.77e-18;2!UBERON:0006331;2.77e-18;2!UBERON:0009662;2.77e-18;2!UBERON:0004733;7.69e-18;12!UBERON:0002028;7.69e-18;12!UBERON:0004732;1.83e-16;13!UBERON:0000988;1.63e-12;3!UBERON:0001017;1.41e-11;75!UBERON:0001016;5.85e-11;83!UBERON:0000073;9.81e-11;53!UBERON:0002616;9.81e-11;53!UBERON:0003296;1.31e-09;4!UBERON:0010133;1.31e-09;4!UBERON:0000955;6.47e-09;68!UBERON:0001872;6.31e-08;5!UBERON:0003528;1.12e-07;34!UBERON:0002020;1.12e-07;34!UBERON:0001950;5.64e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,7.33e-36,15;UBERON:0003057,7.33e-36,15;UBERON:0002298,1.09e-35,6;UBERON:0001049,1.58e-27,56;UBERON:0005068,1.58e-27,56;UBERON:0006241,1.58e-27,56;UBERON:0007135,1.58e-27,56;UBERON:0001017,2.13e-27,81;UBERON:0002240,6.61e-27,3;UBERON:0005174,6.61e-27,3;UBERON:0001137,6.61e-27,3;UBERON:0001896,1.34e-26,3;UBERON:0005290,1.34e-26,3;UBERON:0010096,1.34e-26,3;UBERON:0001016,1.92e-24,89;UBERON:0003075,3.60e-18,82;UBERON:0007284,3.60e-18,82;UBERON:0002148,4.89e-18,2;UBERON:0006331,4.89e-18,2;UBERON:0009662,4.89e-18,2;UBERON:0004733,7.69e-18,12;UBERON:0002028,7.69e-18,12;UBERON:0007277,7.69e-18,12;UBERON:0000073,1.03e-17,53;UBERON:0002616,1.03e-17,53;UBERON:0002346,3.17e-17,86;UBERON:0004732,1.84e-16,13;UBERON:0000955,6.87e-16,68;UBERON:0006238,6.87e-16,68;UBERON:0010371,7.30e-14,104;UBERON:0000988,2.38e-12,3;UBERON:0004121,1.44e-11,171;UBERON:0000924,1.44e-11,171;UBERON:0006601,1.44e-11,171;UBERON:0010314,1.94e-10,132;UBERON:0003296,1.66e-09,4;UBERON:0010133,1.66e-09,4;UBERON:0011216,2.00e-09,223;UBERON:0003528,1.32e-08,34;UBERON:0002020,1.32e-08,34;UBERON:0001872,5.69e-08,5;UBERON:0002780,4.29e-07,41;UBERON:0001890,4.29e-07,41;UBERON:0003080,4.29e-07,41;UBERON:0006240,4.29e-07,41;UBERON:0001950,5.33e-07,20 | |||
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| ||
|short_description=p2@GRIP1 | |||
}} | }} |
Latest revision as of 00:45, 20 September 2015
Short description: | p2@GRIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 41bp_to_ENST00000286445, ENST00000359742, ENST00000538211, NM_001178074, NM_021150, uc001stk.2, uc001stm.2_5end |
EntrezGene: | GRIP1 |
HGNC: | 18708 |
UniProt: | Q9Y3R0F5H4N6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.16e-10 | 1 |
enteroendocrine cell | 2.16e-10 | 1 |
type D enteroendocrine cell | 2.16e-10 | 1 |
somatostatin secreting cell | 2.16e-10 | 1 |
pancreatic D cell | 2.16e-10 | 1 |
progenitor cell of endocrine pancreas | 2.16e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.16e-10 | 1 |