FFCP PHASE1:Hg19::chr12:75603416..75603425,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3747 | |EntrezGene=3747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6234 | |HGNC=6234 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PR1 | |UniProt=Q96PR1 | ||
|association_with_transcript=85bp_to_ENST00000298972,ENST00000341669,ENST00000350228,NM_139136,NM_139137,NM_153748,uc001sxe.2,uc001sxf.2,uc001sxg.1,uc010stw.1_5end | |association_with_transcript=85bp_to_ENST00000298972,ENST00000341669,ENST00000350228,NM_139136,NM_139137,NM_153748,uc001sxe.2,uc001sxf.2,uc001sxg.1,uc010stw.1_5end | ||
|cluster_id=chr12:75603416..75603425,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_14_at_KCNC2_5end | |description=CAGE_peak_14_at_KCNC2_5end | ||
|id=chr12:75603416..75603425,- | |id=chr12:75603416..75603425,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.12e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!8.08e-67!41;UBERON:0001890!8.08e-67!41;UBERON:0006240!8.08e-67!41;UBERON:0003080!3.85e-65!42;UBERON:0001049!7.95e-65!57;UBERON:0005068!7.95e-65!57;UBERON:0006241!7.95e-65!57;UBERON:0007135!7.95e-65!57;UBERON:0002619!1.38e-62!22;UBERON:0002616!1.82e-62!59;UBERON:0001950!3.59e-61!20;UBERON:0000955!2.24e-60!69;UBERON:0006238!2.24e-60!69;UBERON:0001893!7.55e-56!34;UBERON:0002020!2.56e-55!34;UBERON:0003528!2.56e-55!34;UBERON:0000956!6.32e-55!25;UBERON:0000203!6.32e-55!25;UBERON:0005743!1.92e-54!86;UBERON:0001017!1.09e-53!82;UBERON:0001869!1.42e-53!32;UBERON:0002791!1.11e-51!33;UBERON:0000073!8.59e-49!94;UBERON:0001016!8.59e-49!94;UBERON:0003075!1.02e-47!86;UBERON:0007284!1.02e-47!86;UBERON:0003056!2.52e-47!61;UBERON:0002346!2.40e-45!90;UBERON:0007023!6.30e-43!115;UBERON:0000033!5.01e-39!123;UBERON:0000153!6.16e-37!129;UBERON:0007811!6.16e-37!129;UBERON:0004121!1.81e-28!169;UBERON:0000924!1.14e-27!173;UBERON:0006601!1.14e-27!173;UBERON:0002021!1.76e-26!5;UBERON:0000200!1.55e-22!6;UBERON:0000349!1.25e-16!5;UBERON:0001871!2.07e-16!7;UBERON:0000988!5.59e-16!3;UBERON:0000025!4.75e-15!194;UBERON:0004111!3.65e-13!241;UBERON:0001870!4.89e-12!2;UBERON:0001894!4.91e-12!7;UBERON:0006222!4.91e-12!7;UBERON:0000475!1.65e-11!365;UBERON:0001897!2.17e-11!2;UBERON:0001876!2.41e-11!2;UBERON:0000477!4.58e-11!286;UBERON:0002148!9.65e-11!2;UBERON:0009662!9.65e-11!2;UBERON:0000483!1.20e-10!309;UBERON:0000119!1.76e-10!312;UBERON:0002298!2.00e-10!8;UBERON:0000064!2.35e-10!219;UBERON:0001872!5.28e-10!5;UBERON:0002771!3.81e-08!3;UBERON:0000481!7.31e-08!347;UBERON:0006331!1.91e-07!3;UBERON:0004733!5.60e-07!12;UBERON:0002028!5.60e-07!12;UBERON:0007277!5.60e-07!12;UBERON:0002702!6.23e-07!1;UBERON:0007190!7.77e-07!1;UBERON:0000062!8.43e-07!511;UBERON:0002022!8.67e-07!1 | |ontology_enrichment_uberon=UBERON:0002780!8.08e-67!41;UBERON:0001890!8.08e-67!41;UBERON:0006240!8.08e-67!41;UBERON:0003080!3.85e-65!42;UBERON:0001049!7.95e-65!57;UBERON:0005068!7.95e-65!57;UBERON:0006241!7.95e-65!57;UBERON:0007135!7.95e-65!57;UBERON:0002619!1.38e-62!22;UBERON:0002616!1.82e-62!59;UBERON:0001950!3.59e-61!20;UBERON:0000955!2.24e-60!69;UBERON:0006238!2.24e-60!69;UBERON:0001893!7.55e-56!34;UBERON:0002020!2.56e-55!34;UBERON:0003528!2.56e-55!34;UBERON:0000956!6.32e-55!25;UBERON:0000203!6.32e-55!25;UBERON:0005743!1.92e-54!86;UBERON:0001017!1.09e-53!82;UBERON:0001869!1.42e-53!32;UBERON:0002791!1.11e-51!33;UBERON:0000073!8.59e-49!94;UBERON:0001016!8.59e-49!94;UBERON:0003075!1.02e-47!86;UBERON:0007284!1.02e-47!86;UBERON:0003056!2.52e-47!61;UBERON:0002346!2.40e-45!90;UBERON:0007023!6.30e-43!115;UBERON:0000033!5.01e-39!123;UBERON:0000153!6.16e-37!129;UBERON:0007811!6.16e-37!129;UBERON:0004121!1.81e-28!169;UBERON:0000924!1.14e-27!173;UBERON:0006601!1.14e-27!173;UBERON:0002021!1.76e-26!5;UBERON:0000200!1.55e-22!6;UBERON:0000349!1.25e-16!5;UBERON:0001871!2.07e-16!7;UBERON:0000988!5.59e-16!3;UBERON:0000025!4.75e-15!194;UBERON:0004111!3.65e-13!241;UBERON:0001870!4.89e-12!2;UBERON:0001894!4.91e-12!7;UBERON:0006222!4.91e-12!7;UBERON:0000475!1.65e-11!365;UBERON:0001897!2.17e-11!2;UBERON:0001876!2.41e-11!2;UBERON:0000477!4.58e-11!286;UBERON:0002148!9.65e-11!2;UBERON:0009662!9.65e-11!2;UBERON:0000483!1.20e-10!309;UBERON:0000119!1.76e-10!312;UBERON:0002298!2.00e-10!8;UBERON:0000064!2.35e-10!219;UBERON:0001872!5.28e-10!5;UBERON:0002771!3.81e-08!3;UBERON:0000481!7.31e-08!347;UBERON:0006331!1.91e-07!3;UBERON:0004733!5.60e-07!12;UBERON:0002028!5.60e-07!12;UBERON:0007277!5.60e-07!12;UBERON:0002702!6.23e-07!1;UBERON:0007190!7.77e-07!1;UBERON:0000062!8.43e-07!511;UBERON:0002022!8.67e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.01e-33;20!UBERON:0002619;8.42e-31;22!UBERON:0000200;3.07e-30;6!UBERON:0001870;2.72e-27;3!UBERON:0000956;2.92e-27;25!UBERON:0000203;2.92e-27;25!UBERON:0001869;4.15e-27;32!UBERON:0001893;6.62e-24;34!UBERON:0002022;4.22e-21;1!UBERON:0007190;4.22e-21;1!UBERON:0002791;7.79e-21;32!UBERON:0002780;1.46e-18;41!UBERON:0001890;1.46e-18;41!UBERON:0002021;8.13e-17;5!UBERON:0003528;1.86e-16;34!UBERON:0002020;1.86e-16;34!UBERON:0000955;7.43e-16;68!UBERON:0001017;1.22e-15;75!UBERON:0000073;1.39e-15;53!UBERON:0002616;1.39e-15;53!UBERON:0002771;3.02e-11;2!UBERON:0001897;3.02e-11;2!UBERON:0002702;3.02e-11;2!UBERON:0010225;3.02e-11;2!UBERON:0001016;1.41e-08;83!UBERON:0000988;6.34e-08;3!UBERON:0007023;3.17e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.35e-33,20;UBERON:0002619,1.09e-30,22;UBERON:0000200,2.52e-30,6;UBERON:0002780,1.18e-29,41;UBERON:0001890,1.18e-29,41;UBERON:0003080,1.18e-29,41;UBERON:0006240,1.18e-29,41;UBERON:0000073,3.48e-29,53;UBERON:0002616,3.48e-29,53;UBERON:0001869,5.85e-29,32;UBERON:0000955,7.98e-28,68;UBERON:0006238,7.98e-28,68;UBERON:0001049,1.23e-27,56;UBERON:0005068,1.23e-27,56;UBERON:0006241,1.23e-27,56;UBERON:0007135,1.23e-27,56;UBERON:0001893,2.65e-27,34;UBERON:0001870,3.11e-27,3;UBERON:0000956,3.68e-27,25;UBERON:0000203,3.68e-27,25;UBERON:0001017,2.01e-23,81;UBERON:0002791,2.03e-21,32;UBERON:0001016,4.23e-21,89;UBERON:0007190,5.16e-21,1;UBERON:0002022,7.72e-21,1;UBERON:0003528,3.38e-20,34;UBERON:0002020,3.38e-20,34;UBERON:0003056,5.02e-20,61;UBERON:0003075,6.86e-19,82;UBERON:0007284,6.86e-19,82;UBERON:0002346,5.25e-18,86;UBERON:0007023,5.86e-17,114;UBERON:0002021,8.82e-17,5;UBERON:0010371,7.41e-15,104;UBERON:0010314,1.22e-11,132;UBERON:0002702,2.23e-11,2;UBERON:0001897,2.47e-11,2;UBERON:0010225,2.47e-11,2;UBERON:0002771,3.02e-11,2;UBERON:0004121,5.90e-11,171;UBERON:0000924,5.90e-11,171;UBERON:0006601,5.90e-11,171;UBERON:0011216,2.87e-08,223;UBERON:0000988,4.84e-08,3;UBERON:0000025,7.36e-08,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.15424157650247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.46431517882356,0.500763722825999,0,0,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.319267718114302,1.64093091392604,0.252071696221718,0.760729777106397,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41828927698629,0,0.206686796501184,0.887821342714695,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.83518279037446,0.789273282754189,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883889372481891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.15424157650247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.46431517882356,0.500763722825999,0,0,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.319267718114302,1.64093091392604,0.252071696221718,0.760729777106397,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41828927698629,0,0.206686796501184,0.887821342714695,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.83518279037446,0.789273282754189,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883889372481891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@KCNC2 | |short_description=p14@KCNC2 | ||
}} | }} |
Latest revision as of 19:30, 24 September 2015
Short description: | p14@KCNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KCNC2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 85bp_to_ENST00000298972, ENST00000341669, ENST00000350228, NM_139136, NM_139137, NM_153748, uc001sxe.2, uc001sxf.2, uc001sxg.1, uc010stw.1_5end |
EntrezGene: | KCNC2 |
HGNC: | 6234 |
UniProt: | Q96PR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data