FFCP PHASE1:Hg19::chr12:80328949..80328983,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7618 | |||
|TSSclassifier=strong | |||
|UniProt=O14974,B2RAH5 | |||
|association_with_transcript=0bp_to_ENST00000450142,NM_002480,uc001syz.2,uc001szc.2_5end | |||
|cluster_id=chr12:80328949..80328983,- | |||
|description=CAGE_peak_5_at_PPP1R12A_5end | |||
|id=chr12:80328949..80328983,- | |||
|ontology_enrichment_celltype=CL:0002057!5.97e-13!42;CL:0000860!8.78e-13!45;CL:0002009!4.45e-09!65;CL:0002194!1.01e-08!63;CL:0000576!1.01e-08!63;CL:0000040!1.01e-08!63;CL:0000559!1.01e-08!63;CL:0002087!2.13e-08!119;CL:0000766!2.93e-08!76;CL:0000738!3.29e-08!140;CL:0000557!5.49e-08!71;CL:0002031!8.81e-08!124;CL:0000839!1.16e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.52e-16;33!CL:0002057;7.52e-16;33!CL:0000473;2.13e-11;39!CL:0000234;2.13e-11;39!CL:0000576;7.11e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.79e-13,42;CL:0002057,5.79e-13,42;CL:0000473,5.07e-11,48;CL:0000234,5.07e-11,48;CL:0002009,1.92e-09,61;CL:0002194,4.39e-09,59;CL:0000576,4.39e-09,59;CL:0000040,4.39e-09,59;CL:0000559,4.39e-09,59;CL:0002087,1.55e-08,115;CL:0000766,1.60e-08,72;CL:0000738,2.60e-08,136;CL:0000557,2.92e-08,67;CL:0000839,6.33e-08,66;CL:0002031,6.75e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-33!115;UBERON:0001049!7.80e-20!57;UBERON:0005068!7.80e-20!57;UBERON:0006241!7.80e-20!57;UBERON:0007135!7.80e-20!57;UBERON:0003080!3.26e-19!42;UBERON:0002780!8.30e-19!41;UBERON:0001890!8.30e-19!41;UBERON:0006240!8.30e-19!41;UBERON:0002020!1.01e-16!34;UBERON:0003528!1.01e-16!34;UBERON:0001017!2.00e-16!82;UBERON:0001869!4.56e-16!32;UBERON:0001893!5.42e-16!34;UBERON:0002791!1.06e-15!33;UBERON:0002616!1.16e-15!59;UBERON:0005743!5.88e-15!86;UBERON:0000073!2.13e-14!94;UBERON:0001016!2.13e-14!94;UBERON:0000955!1.60e-13!69;UBERON:0006238!1.60e-13!69;UBERON:0002619!8.29e-13!22;UBERON:0000956!1.19e-12!25;UBERON:0000203!1.19e-12!25;UBERON:0001950!1.19e-11!20;UBERON:0002346!1.89e-10!90;UBERON:0003075!1.73e-09!86;UBERON:0007284!1.73e-09!86;UBERON:0003056!2.11e-09!61;UBERON:0000153!2.59e-08!129;UBERON:0007811!2.59e-08!129;UBERON:0002390!5.64e-08!102;UBERON:0003061!5.64e-08!102;UBERON:0000924!1.46e-07!173;UBERON:0006601!1.46e-07!173;UBERON:0000033!3.79e-07!123;UBERON:0004121!7.51e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;6.37e-15;32!UBERON:0001869;6.94e-15;32!UBERON:0003528;1.22e-14;34!UBERON:0002020;1.22e-14;34!UBERON:0002780;5.83e-14;41!UBERON:0001890;5.83e-14;41!UBERON:0001893;6.83e-14;34!UBERON:0002619;7.04e-13;22!UBERON:0000956;8.30e-13;25!UBERON:0000203;8.30e-13;25!UBERON:0001950;1.08e-11;20!UBERON:0000073;4.14e-11;53!UBERON:0002616;4.14e-11;53!UBERON:0007023;3.65e-09;114!UBERON:0000955;3.12e-07;68!UBERON:0001017;7.29e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.48e-33,114;UBERON:0001049,2.34e-19,56;UBERON:0005068,2.34e-19,56;UBERON:0006241,2.34e-19,56;UBERON:0007135,2.34e-19,56;UBERON:0002780,7.93e-19,41;UBERON:0001890,7.93e-19,41;UBERON:0003080,7.93e-19,41;UBERON:0006240,7.93e-19,41;UBERON:0000073,2.48e-18,53;UBERON:0002616,2.48e-18,53;UBERON:0003528,9.73e-17,34;UBERON:0002020,9.73e-17,34;UBERON:0002791,4.27e-16,32;UBERON:0001869,4.39e-16,32;UBERON:0001017,5.14e-16,81;UBERON:0001893,5.21e-16,34;UBERON:0001016,2.50e-15,89;UBERON:0000955,4.02e-13,68;UBERON:0006238,4.02e-13,68;UBERON:0002619,8.05e-13,22;UBERON:0000956,1.15e-12,25;UBERON:0000203,1.15e-12,25;UBERON:0001950,1.16e-11,20;UBERON:0002346,1.59e-10,86;UBERON:0003075,1.50e-09,82;UBERON:0007284,1.50e-09,82;UBERON:0003056,2.16e-09,61;UBERON:0011216,9.15e-09,223;UBERON:0002390,3.83e-08,98;UBERON:0003061,3.83e-08,98;UBERON:0004121,3.76e-07,171;UBERON:0000924,3.76e-07,171;UBERON:0006601,3.76e-07,171 | |||
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| |||
|short_description=p5@PPP1R12A | |||
}} |
Latest revision as of 00:51, 25 September 2015
Short description: | p5@PPP1R12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPP1R12A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450142, NM_002480, uc001syz.2, uc001szc.2_5end |
EntrezGene: | PPP1R12A |
HGNC: | 7618 |
UniProt: | O14974B2RAH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.79e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.79e-13 | 42 |
defensive cell | 5.07e-11 | 48 |
phagocyte | 5.07e-11 | 48 |
macrophage dendritic cell progenitor | 1.92e-09 | 61 |
monopoietic cell | 4.39e-09 | 59 |
monocyte | 4.39e-09 | 59 |
monoblast | 4.39e-09 | 59 |
promonocyte | 4.39e-09 | 59 |
nongranular leukocyte | 1.55e-08 | 115 |
myeloid leukocyte | 1.60e-08 | 72 |
leukocyte | 2.60e-08 | 136 |
granulocyte monocyte progenitor cell | 2.92e-08 | 67 |
myeloid lineage restricted progenitor cell | 6.33e-08 | 66 |
hematopoietic lineage restricted progenitor cell | 6.75e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.48e-33 | 114 |
neural tube | 2.34e-19 | 56 |
neural rod | 2.34e-19 | 56 |
future spinal cord | 2.34e-19 | 56 |
neural keel | 2.34e-19 | 56 |
regional part of forebrain | 7.93e-19 | 41 |
forebrain | 7.93e-19 | 41 |
anterior neural tube | 7.93e-19 | 41 |
future forebrain | 7.93e-19 | 41 |
regional part of nervous system | 2.48e-18 | 53 |
regional part of brain | 2.48e-18 | 53 |
brain grey matter | 9.73e-17 | 34 |
gray matter | 9.73e-17 | 34 |
regional part of telencephalon | 4.27e-16 | 32 |
cerebral hemisphere | 4.39e-16 | 32 |
central nervous system | 5.14e-16 | 81 |
telencephalon | 5.21e-16 | 34 |
nervous system | 2.50e-15 | 89 |
brain | 4.02e-13 | 68 |
future brain | 4.02e-13 | 68 |
regional part of cerebral cortex | 8.05e-13 | 22 |
cerebral cortex | 1.15e-12 | 25 |
pallium | 1.15e-12 | 25 |
neocortex | 1.16e-11 | 20 |
neurectoderm | 1.59e-10 | 86 |
neural plate | 1.50e-09 | 82 |
presumptive neural plate | 1.50e-09 | 82 |
pre-chordal neural plate | 2.16e-09 | 61 |
organ system subdivision | 9.15e-09 | 223 |
hematopoietic system | 3.83e-08 | 98 |
blood island | 3.83e-08 | 98 |
ectoderm-derived structure | 3.76e-07 | 171 |
ectoderm | 3.76e-07 | 171 |
presumptive ectoderm | 3.76e-07 | 171 |