FFCP PHASE1:Hg19::chr22:44208137..44208219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64800 | |EntrezGene=64800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24204 | |HGNC=24204 | ||
|TSSclassifier=strong | |||
|UniProt=Q5THR3,B0QYI5 | |UniProt=Q5THR3,B0QYI5 | ||
|association_with_transcript=0bp_to_ENST00000262726,ENST00000356087,ENST00000404038,ENST00000485142,NM_022785,NM_198856_5end | |association_with_transcript=0bp_to_ENST00000262726,ENST00000356087,ENST00000404038,ENST00000485142,NM_022785,NM_198856_5end | ||
|cluster_id=chr22:44208137..44208219,- | |||
|coexpression_cluster_id=C522 | |coexpression_cluster_id=C522 | ||
|description=CAGE_peak_1_at_EFCAB6_5end | |description=CAGE_peak_1_at_EFCAB6_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.24e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.24e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-28!115;UBERON:0001049!1.46e-25!57;UBERON:0005068!1.46e-25!57;UBERON:0006241!1.46e-25!57;UBERON:0007135!1.46e-25!57;UBERON:0002616!6.05e-24!59;UBERON:0000955!1.07e-22!69;UBERON:0006238!1.07e-22!69;UBERON:0001017!1.28e-21!82;UBERON:0005743!1.96e-21!86;UBERON:0003080!1.41e-20!42;UBERON:0002780!1.73e-20!41;UBERON:0001890!1.73e-20!41;UBERON:0006240!1.73e-20!41;UBERON:0003075!4.22e-20!86;UBERON:0007284!4.22e-20!86;UBERON:0000153!3.61e-19!129;UBERON:0007811!3.61e-19!129;UBERON:0000033!4.45e-19!123;UBERON:0000073!6.30e-19!94;UBERON:0001016!6.30e-19!94;UBERON:0002346!9.77e-19!90;UBERON:0000475!3.66e-18!365;UBERON:0004121!1.32e-16!169;UBERON:0002020!1.41e-16!34;UBERON:0003528!1.41e-16!34;UBERON:0001893!1.49e-16!34;UBERON:0002791!4.95e-16!33;UBERON:0000924!6.74e-16!173;UBERON:0006601!6.74e-16!173;UBERON:0001869!7.62e-16!32;UBERON:0003056!1.90e-15!61;UBERON:0002619!2.18e-12!22;UBERON:0000956!4.79e-12!25;UBERON:0000203!4.79e-12!25;UBERON:0001950!2.10e-11!20;UBERON:0000481!3.29e-11!347;UBERON:0000062!5.97e-10!511;UBERON:0000468!1.51e-08!659;UBERON:0004111!1.05e-07!241;UBERON:0000467!1.07e-07!625;UBERON:0000480!1.82e-07!626;UBERON:0000483!4.32e-07!309;UBERON:0000025!6.16e-07!194;UBERON:0000477!6.31e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!2.03e-28!115;UBERON:0001049!1.46e-25!57;UBERON:0005068!1.46e-25!57;UBERON:0006241!1.46e-25!57;UBERON:0007135!1.46e-25!57;UBERON:0002616!6.05e-24!59;UBERON:0000955!1.07e-22!69;UBERON:0006238!1.07e-22!69;UBERON:0001017!1.28e-21!82;UBERON:0005743!1.96e-21!86;UBERON:0003080!1.41e-20!42;UBERON:0002780!1.73e-20!41;UBERON:0001890!1.73e-20!41;UBERON:0006240!1.73e-20!41;UBERON:0003075!4.22e-20!86;UBERON:0007284!4.22e-20!86;UBERON:0000153!3.61e-19!129;UBERON:0007811!3.61e-19!129;UBERON:0000033!4.45e-19!123;UBERON:0000073!6.30e-19!94;UBERON:0001016!6.30e-19!94;UBERON:0002346!9.77e-19!90;UBERON:0000475!3.66e-18!365;UBERON:0004121!1.32e-16!169;UBERON:0002020!1.41e-16!34;UBERON:0003528!1.41e-16!34;UBERON:0001893!1.49e-16!34;UBERON:0002791!4.95e-16!33;UBERON:0000924!6.74e-16!173;UBERON:0006601!6.74e-16!173;UBERON:0001869!7.62e-16!32;UBERON:0003056!1.90e-15!61;UBERON:0002619!2.18e-12!22;UBERON:0000956!4.79e-12!25;UBERON:0000203!4.79e-12!25;UBERON:0001950!2.10e-11!20;UBERON:0000481!3.29e-11!347;UBERON:0000062!5.97e-10!511;UBERON:0000468!1.51e-08!659;UBERON:0004111!1.05e-07!241;UBERON:0000467!1.07e-07!625;UBERON:0000480!1.82e-07!626;UBERON:0000483!4.32e-07!309;UBERON:0000025!6.16e-07!194;UBERON:0000477!6.31e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.64e-17;41!UBERON:0001890;6.64e-17;41!UBERON:0001893;1.78e-16;34!UBERON:0001869;1.83e-16;32!UBERON:0003528;1.88e-16;34!UBERON:0002020;1.88e-16;34!UBERON:0002791;4.10e-16;32!UBERON:0000073;4.90e-16;53!UBERON:0002616;4.90e-16;53!UBERON:0000956;8.51e-14;25!UBERON:0000203;8.51e-14;25!UBERON:0002619;1.02e-13;22!UBERON:0001950;1.20e-12;20!UBERON:0000955;7.25e-12;68!UBERON:0001017;1.47e-10;75!UBERON:0007023;6.29e-09;114!UBERON:0001016;2.03e-08;83 | |ontology_enrichment_uberon_v019=UBERON:0002780;6.64e-17;41!UBERON:0001890;6.64e-17;41!UBERON:0001893;1.78e-16;34!UBERON:0001869;1.83e-16;32!UBERON:0003528;1.88e-16;34!UBERON:0002020;1.88e-16;34!UBERON:0002791;4.10e-16;32!UBERON:0000073;4.90e-16;53!UBERON:0002616;4.90e-16;53!UBERON:0000956;8.51e-14;25!UBERON:0000203;8.51e-14;25!UBERON:0002619;1.02e-13;22!UBERON:0001950;1.20e-12;20!UBERON:0000955;7.25e-12;68!UBERON:0001017;1.47e-10;75!UBERON:0007023;6.29e-09;114!UBERON:0001016;2.03e-08;83 | ||
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| ||
|short_description=p1@EFCAB6 | |short_description=p1@EFCAB6 | ||
}} | }} |
Latest revision as of 01:46, 25 September 2015
Short description: | p1@EFCAB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFCAB6_5end |
Coexpression cluster: | C522_pituitary_medulla_lung_testis_caudate_epididymis_thyroid |
Association with transcript: | 0bp_to_ENST00000262726, ENST00000356087, ENST00000404038, ENST00000485142, NM_022785, NM_198856_5end |
EntrezGene: | EFCAB6 |
HGNC: | 24204 |
UniProt: | Q5THR3B0QYI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data