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FFCP PHASE1:Mm9::chr19:31157472..31157536,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=83410
|EntrezGene=83410
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q8C7E9
|UniProt=Q8C7E9
|association_with_transcript=141bp_to_ENSMUST00000066039,NM_031249,uc008her.1_5end
|association_with_transcript=141bp_to_ENSMUST00000066039,NM_031249,uc008her.1_5end
|cluster_id=chr19:31157472..31157536,+
|description=CAGE_peak_1_at_Cstf2t_5end
|description=CAGE_peak_1_at_Cstf2t_5end
|id=chr19:31157472..31157536,+
|id=chr19:31157472..31157536,+
|ontology_enrichment_celltype=CL:0000117!5.13e-11!23;CL:0000337!5.13e-11!23;CL:0000540!4.19e-09!33;CL:0000047!4.19e-09!33;CL:0000031!4.19e-09!33;CL:0000404!4.19e-09!33;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.13e-11,23;CL:0000337,5.13e-11,23;CL:0000540,4.19e-09,33;CL:0000047,4.19e-09,33;CL:0000031,4.19e-09,33;CL:0000404,4.19e-09,33;CL:0000393,7.46e-09,39;CL:0000211,7.46e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.95e-23!63;UBERON:0001049!1.69e-22!52;UBERON:0005068!1.69e-22!52;UBERON:0006241!1.69e-22!52;UBERON:0007135!1.69e-22!52;UBERON:0003056!4.53e-22!49;UBERON:0000955!2.44e-21!50;UBERON:0006238!2.44e-21!50;UBERON:0000153!2.50e-21!94;UBERON:0001017!7.83e-21!73;UBERON:0005743!7.83e-21!73;UBERON:0002616!1.21e-20!49;UBERON:0002346!1.53e-20!71;UBERON:0003075!1.53e-20!71;UBERON:0007284!1.53e-20!71;UBERON:0007811!5.04e-20!86;UBERON:0000073!1.73e-19!75;UBERON:0001016!1.73e-19!75;UBERON:0003080!6.57e-19!40;UBERON:0002780!2.50e-18!39;UBERON:0001890!2.50e-18!39;UBERON:0006240!2.50e-18!39;UBERON:0002020!3.95e-16!34;UBERON:0004121!1.74e-14!102;UBERON:0000924!1.74e-14!102;UBERON:0006601!1.74e-14!102;UBERON:0002791!3.65e-14!29;UBERON:0003528!3.65e-14!29;UBERON:0001893!3.65e-14!29;UBERON:0000025!8.55e-13!114;UBERON:0004111!7.94e-11!122;UBERON:0000956!4.83e-10!21;UBERON:0001869!4.83e-10!21;UBERON:0000203!4.83e-10!21;UBERON:0000477!2.30e-08!154;UBERON:0002619!2.47e-08!17;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000483!4.48e-07!181
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.67e-25,64;UBERON:0003075,2.67e-25,64;UBERON:0007284,2.67e-25,64;UBERON:0000073,7.95e-23,54;UBERON:0010314,1.19e-22,92;UBERON:0001049,1.69e-22,52;UBERON:0005068,1.69e-22,52;UBERON:0006241,1.69e-22,52;UBERON:0007135,1.69e-22,52;UBERON:0003056,4.53e-22,49;UBERON:0001017,7.83e-21,73;UBERON:0010371,1.39e-20,73;UBERON:0000955,1.59e-20,47;UBERON:0006238,1.59e-20,47;UBERON:0002616,7.83e-20,46;UBERON:0001016,1.73e-19,75;UBERON:0003080,6.57e-19,40;UBERON:0002780,2.50e-18,39;UBERON:0001890,2.50e-18,39;UBERON:0006240,2.50e-18,39;UBERON:0004121,2.57e-17,95;UBERON:0000924,2.57e-17,95;UBERON:0006601,2.57e-17,95;UBERON:0002020,3.95e-16,34;UBERON:0003528,3.65e-14,29;UBERON:0002791,3.65e-14,29;UBERON:0001893,3.65e-14,29;UBERON:0000025,8.55e-13,114;UBERON:0004111,7.94e-11,122;UBERON:0000956,4.83e-10,21;UBERON:0001869,4.83e-10,21;UBERON:0000203,4.83e-10,21;UBERON:0000483,2.27e-08,174;UBERON:0002619,2.47e-08,17;UBERON:0000119,6.77e-08,176;UBERON:0002021,1.90e-07,10;UBERON:0000411,1.90e-07,10;UBERON:0001950,1.90e-07,10
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10101837,31.2135434975006,22.9997125615916,31.0074840519572,25.2196327739615,26.0358385534808,20.6787194167383,27.9968342310273,21.1255366449555,83.9902478639444,45.0044803592376,41.0337056333602,32.6677996418,41.2019836893962,29.2294097099046,30.7475965251875,35.8062058320863,34.813302349336,64.2613761397176,61.0623613266675,36.6572899928687,40.5450430580328,30.1970214064592,29.8817892848929,32.4038319158141,33.775830312815,34.2557031131911,30.4240425979629,37.2566200308665,36.9603012276749,31.5585959478311,32.2585585248581,30.7877893249054,34.2449323391997,26.0739941157493,11.3212836220773,6.36968381927277,4.19711540910196,28.2056807286998,27.4016414158726,34.0662021137113,17.1494703263253,19.5613120573792,68.3349729566651,64.4455331110048,68.7474616127276,57.0552565381043,79.4695722933945,88.381085994595,78.3026100268895,67.0978592804088,58.4553707589624,66.2733199042329,53.7618460486035,54.2673827825402,40.8053317752381,27.7141657457855,42.3418588508524,44.3062855364534,33.1147624424407,30.2871534141174,35.9429514742833,32.0925458940023,32.1918710860604,32.255104377019,29.1225088231334,31.1802492211713,27.62646056765,37.6272016113628,31.1728836791661,29.9009291718743,25.549325849805,34.0029505510458,31.8868404718436,33.3654515579554,34.0963751624669,34.8831399917588,35.6674551774103,33.8458431566706,33.8416749814629,30.7791562382276,34.7658531445406,25.2514022245982,31.4382798029061,29.4528402302935,24.9630936333511,26.9590103663581,33.3728436997375,40.4693136259472,31.8146987485755,30.941431782955,32.3277281196345,26.6915617134614,27.1285367675893
|phase1_expression=45.1619748835519,16.0528687514106,11.8299802241279,19.0552453123303,15.0268718983904,14.6054966563344,17.7545606852599,36.0254072401998,21.3998857670533,17.7889040004715,38.1816069142876,42.678105062505,44.1697883222511,44.1473032215937,16.9885978525988,17.2103977281352,7.69518065940961,42.5873923233621,39.90030017927,31.8292238848523,37.759220827075,25.5177744586275,29.2543763835608,20.6390225403495,15.8292403936347,13.2073351746455,16.3689558540448,19.6078821744159,31.5438876297581,25.9591033652729,18.4036323843903,19.0509202037889,22.1423323530445,15.8481681015439,15.8868390863201,17.9533416987172,13.0668388007916,32.2269355667419,32.8160844699996,39.2642807980349,23.5292595212406,30.7370468231301,37.86980753643,72.1388767000058,68.4294285731723,45.7031412882587,28.1660883965294,30.0874715805016,27.2410866590745,31.3032137509596,30.2370670710783,12.9377307928474,34.7309994539514,25.3876749703971,21.1739093459752,30.8711323243136,21.7765414353455,24.2365883370398,64.3366345533521,84.1095657042532,60.213983333087,24.0579617769084,25.789549087223,22.497492932035,16.8107281636386,13.4991221839759,17.0772062995491,26.5110630671873,50.1857723573032,53.1923397026861,54.4741649900079,46.56111045782,49.2536846322098,58.3056204263181,59.5200375023248,46.8801581171111,36.3382407297983,54.0117440100344,52.379827840379,66.3388027282875,74.1964789615542,73.4487852485032,54.4406848052693,48.9603470727562,57.7577376596342,50.0868595305235,54.1012387036591,64.1214093639034,24.4595604466185,25.3164726357731,33.0445517119913,24.0918685554788,11.5595126730318,23.746940432064,24.0417274455638,22.8493712419641,28.7911061270091,45.3344658057634,56.1137769942197,38.5140136216271,45.4924245878678,66.7297682554453,43.3168907501298,0,18.6182295269644,17.7351905832569,18.1988800205322,27.5183150122935,31.8493596886021,24.1960686675664,33.6561533926304,27.7063585264048,26.7513976817028,22.0055055206829,21.9890882343768,27.7723166838583,22.9891319992968,22.7020990364261,26.5383165584962,32.6769036893767,25.3967746229453,29.5773904412485,29.8226817948995,61.1911865754134,65.9757126462383,26.5675337416935,27.3178483873498,15.5974710058286,23.63506223559,61.5639527953821,57.6450759551469,57.5496932676919,65.0102957519114,66.4860189058859,62.1286253233085,62.3006450180189,41.3467817232284,27.4939405048306,26.7886123939695,43.3510223126136,49.8361296547155,43.4514977379264,50.5974584753031,44.6086260793717,51.2314838609499,56.6262643659036,53.5036847236052,51.7406741478031,46.7782544664268,51.8150659659825,46.8029990276104,41.2087976963841,47.2680323683516,30.9944428204728,33.9540525073107,45.180778567798,21.7686088067103,20.8451804762919,14.4923384691752,45.1534184127394,42.4492168565784,41.0541500131114,39.5363708427301,40.7301959717126,42.2691889311416,45.1115852815791,48.8257590547307,41.1014005132437,51.3426731730059,39.728526307141,44.5878452502207,47.953595875509,43.6904729429191,35.6989073902589,72.5500322546239,60.9195305285364,29.7376904685418,22.4782981664013,47.5632798693572,37.622340841391,30.5415883333361,29.0424275457613,31.8000602698165,27.7729414124336,35.1151505542939,37.5513616770745,32.673577144035,28.0528625578023,37.6280688139902,28.7622210769351,22.4783571869682,30.2694735346638,45.8996320306458,40.5582219764537,29.3040112750009,39.7120089298363,38.7904974335251,38.7149725794558,40.0919645367791,35.1312152191453,38.3076895932954,30.2323051608411,30.2381679628892,24.1925403288336,21.6214894624523,21.1370385641763,23.1260538382893,25.0824246142514,26.4810885852677,21.28951417136,29.1843408195064,20.5921059891061,40.2550978276593,24.5613025461212,33.7000686963725,39.9074627156437,28.3447913364621,29.4290548031654,28.2672380954905,40.7406535306542,39.9264192282963,41.9270361864715,38.4892007193143,33.8362640032468,33.5641533649279,29.8554481222432,40.3545968911849,35.6558150334528,34.9205943359897,30.9701664812745,30.7379267721294,26.9047248961612,43.729472342389,19.0366989336548,28.0305635620851,37.2514607511389,55.0688523658126,59.5435367888392,67.5411974951903,32.0638077549554,31.8663301610419,33.5777320095109,37.2682478077742,30.3490373399741,30.9690156974528,33.9691836946599,31.9800454323167,34.4861912335348,34.3900366813475,71.0120109292194,32.5042795126935,46.2970569534864,36.486678895201,30.0245623810015,22.5666735177937,35.4459728786273,33.8602383800521,28.2907619633847,27.4630760379119,28.8989039067292,22.224833212467,27.2650297108129,29.5892824059319,18.3301319602773,15.8127912862498,14.4389760547462,41.1931922962083,51.677533986986,59.2462771725016,49.2975180572662,54.6207919618203,55.1159646390398,52.984784633883,47.4965320618775,29.5686352160275,23.7251919367479,21.6117830093863,19.1268053412117,24.0581995776899,22.5570339231303,20.4126708245363,18.2196398717018,37.3095470886209,55.6275906031529,19.6501512917531,40.6582129887548,27.2235955233476,21.2856356415301,19.6839687918276,21.0475919350001,33.6557291387834,35.9675232471801,31.0949941059954,18.1387417422872,46.9758950467986,33.9543510101837,31.2135434975006,22.9997125615916,31.0074840519572,25.2196327739615,26.0358385534808,20.6787194167383,27.9968342310273,21.1255366449555,83.9902478639444,45.0044803592376,41.0337056333602,32.6677996418,41.2019836893962,29.2294097099046,30.7475965251875,35.8062058320863,34.813302349336,64.2613761397176,61.0623613266675,36.6572899928687,40.5450430580328,30.1970214064592,29.8817892848929,32.4038319158141,33.775830312815,34.2557031131911,30.4240425979629,37.2566200308665,36.9603012276749,31.5585959478311,32.2585585248581,30.7877893249054,34.2449323391997,26.0739941157493,11.3212836220773,6.36968381927277,4.19711540910196,28.2056807286998,27.4016414158726,34.0662021137113,17.1494703263253,19.5613120573792,68.3349729566651,64.4455331110048,68.7474616127276,57.0552565381043,79.4695722933945,88.381085994595,78.3026100268895,67.0978592804088,58.4553707589624,66.2733199042329,53.7618460486035,54.2673827825402,40.8053317752381,27.7141657457855,42.3418588508524,44.3062855364534,33.1147624424407,30.2871534141174,35.9429514742833,32.0925458940023,32.1918710860604,32.255104377019,29.1225088231334,31.1802492211713,27.62646056765,37.6272016113628,31.1728836791661,29.9009291718743,25.549325849805,34.0029505510458,31.8868404718436,33.3654515579554,34.0963751624669,34.8831399917588,35.6674551774103,33.8458431566706,33.8416749814629,30.7791562382276,34.7658531445406,25.2514022245982,31.4382798029061,29.4528402302935,24.9630936333511,26.9590103663581,33.3728436997375,40.4693136259472,31.8146987485755,30.941431782955,32.3277281196345,26.6915617134614,27.1285367675893
|short_description=p1@Cstf2t
|short_description=p1@Cstf2t
}}
}}

Latest revision as of 14:51, 25 September 2015

Short description:p1@Cstf2t
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cstf2t_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 141bp_to_ENSMUST00000066039, NM_031249, uc008her.1_5end
EntrezGene:Cstf2t
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cstf2t

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G745.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.06
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E936.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F142.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E444.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E844.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A242.59
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A439.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A631.83
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A337.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I929.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.83
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I116.37
GP2+ M cell, pool3.CNhs13240.11847-124I219.61
Ileum epithelium, pool1.CNhs13199.10252-104B931.54
Ileum epithelium, pool2.CNhs13232.10253-104C125.96
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.95
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G832.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H339.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G923.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H437.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D872.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D968.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B345.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.24
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C331.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C430.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.73
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I925.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C130.87
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.78
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.24
Mouse Granule cells, donor1.CNhs12131.11713-123C364.34
Mouse Granule cells, donor2.CNhs12357.11731-123E384.11
Mouse Granule cells, donor3.CNhs12108.11636-122C760.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.06
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C817.08
Mouse Microglia, donor2.CNhs12634.11736-123E826.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D550.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F553.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D954.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F146.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D549.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D258.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F259.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F354.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D752.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D466.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F474.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D873.45
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E454.44
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I657.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D650.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E164.12
Mouse Schwann, donor1.CNhs12507.11728-123D924.46
Mouse Schwann, donor2.CNhs12573.11746-123F925.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.75
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A728.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I745.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E356.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I838.51
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G645.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H166.73
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.52
accessory axillary lymph node, adult.CNhs10475.1063-29H931.85
adrenal gland, adult.CNhs10508.49-24D724.20
adrenal gland, embryo E14.CNhs11038.406-44C533.66
adrenal gland, embryo E16.CNhs11004.1254-43D627.71
adrenal gland, embryo E17.CNhs11043.1263-45I126.75
adrenal gland, embryo E18.CNhs11026.1262-18F522.01
adrenal gland, neonate N00.CNhs11191.1311-23C121.99
adrenal gland, neonate N25.CNhs11223.1377-27I327.77
amnion, adult pregnant day17.5.CNhs10488.583-22A822.99
aorta, adult.CNhs10498.46-23H122.70
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F532.68
bone (os femoris), neonate N16.CNhs11225.1525-43A625.40
bone (os femoris), neonate N20.CNhs11195.1350-25C329.58
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B261.19
cerebellum, neonate N30.CNhs11135.1395-42I265.98
colon, adult.CNhs10468.36-18H726.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C727.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.64
corpora quadrigemina, adult.CNhs10501.16-22A461.56
corpus striatum, adult.CNhs10487.19-21D857.65
corpus striatum, neonate N00.CNhs11226.630-43F157.55
cortex, adult.CNhs10473.12-14D565.01
cortex, neonate N30.CNhs11107.1392-42F266.49
diencephalon, adult.CNhs10482.20-12F262.13
diencephalon, neonate N30.CNhs11201.1388-42B262.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B141.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.49
epididymis, adult.CNhs10490.58-23B226.79
eyeball, adult.CNhs10484.31-12G443.35
eyeball, embryo E12.CNhs11016.345-16C649.84
eyeball, embryo E14.CNhs10521.399-16E243.45
eyeball, embryo E15.CNhs10593.426-16C950.60
eyeball, embryo E17.CNhs11023.1261-18D444.61
eyeball, neonate N00.CNhs11207.633-15C651.23
eyeball, neonate N01.CNhs11140.1532-43E756.63
eyeball, neonate N02.CNhs11205.1551-44G853.50
eyeball, neonate N16.CNhs11188.777-19A251.74
forelimb, embryo E11.CNhs10596.335-25E246.78
forelimb, embryo E12.CNhs10600.359-14H251.82
forelimb, embryo E13.CNhs10589.384-1E246.80
forelimb, embryo E14.CNhs10577.413-26A841.21
forelimb, embryo E15.CNhs11007.437-20E747.27
forelimb, embryo E17.CNhs10598.1517-43C430.99
forelimb, embryo E18.CNhs11008.1520-43B533.95
gonad, embryo E13.CNhs11044.1564-45I645.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.85
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.49
heart, embryo E11.CNhs10586.331-24E945.15
heart, embryo E12.CNhs11015.353-12F542.45
heart, embryo E13.CNhs11013.376-3I941.05
heart, embryo E14.CNhs10597.403-26D439.54
heart, embryo E15.CNhs11017.431-16C840.73
heart, embryo E16.CNhs11021.457-17C642.27
heart, embryo E17.CNhs11025.479-18E545.11
heart, embryo E18.CNhs11030.1283-20G348.83
heart, neonate N00.CNhs11213.639-21E341.10
heart, neonate N03.CNhs11221.1349-25I251.34
heart, neonate N10.CNhs11118.749-24G139.73
heart, neonate N16.CNhs11209.782-15G144.59
heart, neonate N20.CNhs11127.821-26I647.95
heart, neonate N25.CNhs11196.1351-25D343.69
heart, neonate N30.CNhs11202.1390-42D235.70
hippocampus, adult.CNhs10478.13-16E872.55
hippocampus, neonate N00.CNhs11228.627-43G160.92
intestinal mucosa, adult.CNhs10506.860-29I329.74
intestine, adult.CNhs10496.178-9A322.48
intestine, embryo E12.CNhs11019.1251-16I547.56
intestine, embryo E13.CNhs11010.381-16D537.62
intestine, embryo E15.CNhs10602.976-16D830.54
intestine, embryo E16.CNhs10585.463-22H429.04
intestine, embryo E17.CNhs10582.482-18D331.80
intestine, embryo E18.CNhs10526.1289-20F727.77
intestine, neonate N00.CNhs11126.644-26D135.12
intestine, neonate N01.CNhs11192.1322-23E937.55
intestine, neonate N06.CNhs11102.688-20B832.67
intestine, neonate N07.CNhs11095.720-20F228.05
intestine, neonate N10.CNhs11098.755-23A537.63
intestine, neonate N20.CNhs11187.827-18D128.76
intestine, neonate N25.CNhs11121.1352-25E322.48
intestine, neonate N30.CNhs11131.1384-42G130.27
kidney, embryo E14.CNhs10606.411-4I945.90
kidney, embryo E15.CNhs10997.434-16F840.56
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I239.71
kidney, embryo E18.CNhs11001.1288-20C738.79
kidney, neonate N00.CNhs11214.646-21G738.71
kidney, neonate N10.CNhs11206.758-6D540.09
kidney, neonate N20.CNhs11113.832-19I135.13
kidney, neonate N25.CNhs11122.1353-25F338.31
kidney, neonate N30.CNhs11203.1385-42H130.23
liver, adult pregnant day01.CNhs10466.508-5B230.24
liver, embryo E12.CNhs10601.355-15F824.19
liver, embryo E13.CNhs10524.378-3H621.62
liver, embryo E14.CNhs10594.409-16E121.14
liver, embryo E15.CNhs10520.433-16D723.13
liver, embryo E16.CNhs10523.462-17F525.08
liver, embryo E17.CNhs10510.481-18A326.48
liver, embryo E18.CNhs10579.499-43G421.29
liver, neonate N00.CNhs11117.641-24F429.18
liver, neonate N03.CNhs11123.1345-25G220.59
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H224.56
liver, neonate N10.CNhs11115.751-24B933.70
liver, neonate N20.CNhs11220.823-25A339.91
liver, neonate N25.CNhs11198.1368-26H128.34
liver, neonate N30.CNhs11106.1382-42D129.43
lung, adult.CNhs10474.28-22B128.27
lung, embryo E12.CNhs10522.354-16G240.74
lung, embryo E14.CNhs10604.404-26F839.93
lung, embryo E15.CNhs11020.432-17C541.93
lung, embryo E16.CNhs10998.458-17B638.49
lung, embryo E17.CNhs10605.480-44A633.84
lung, embryo E18.CNhs10583.1287-20I633.56
lung, neonate N00.CNhs11224.640-42C629.86
lung, neonate N06.CNhs11212.683-20E540.35
lung, neonate N07.CNhs11111.715-19A335.66
lung, neonate N10.CNhs11219.750-23E634.92
lung, neonate N20.CNhs11109.822-18A430.97
lung, neonate N25.CNhs11119.1359-25C730.74
lung, neonate N30.CNhs11133.1394-42H226.90
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A143.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A119.04
mammary gland, adult lactating day02.CNhs10480.595-22B628.03
mammary gland, adult pregnant day19.CNhs10476.588-5H237.25
medulla oblongata, adult.CNhs10477.17-12C255.07
medulla oblongata, neonate N30.CNhs11200.1396-42A359.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C767.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E131.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E233.58
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.27
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D730.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.97
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.97
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D431.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D634.39
olfactory brain, adult.CNhs10489.18-22I971.01
ovary, adult.CNhs10507.91-2I732.50
ovary, embryo E18.CNhs11040.505-44H746.30
ovary, neonate N00.CNhs11217.1299-22I436.49
oviduct, adult pregnant day01.CNhs10500.988-6G630.02
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F435.45
pancreas, embryo E15.CNhs11042.1556-45F233.86
pancreas, embryo E16.CNhs11003.460-26E528.29
pancreas, embryo E17.CNhs10599.1558-45G327.46
pancreas, embryo E18.CNhs10580.1535-43I728.90
pancreas, neonate N00.CNhs11105.645-26G922.22
pancreas, neonate N01.CNhs11138.1531-43D727.27
pancreas, neonate N02.CNhs11139.1539-43D829.59
pancreas, neonate N16.CNhs11136.787-43B618.33
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G841.19
pituitary gland, embryo E12.CNhs11018.346-16E651.68
pituitary gland, embryo E13.CNhs11009.370-44C759.25
pituitary gland, embryo E14.CNhs11037.398-44A549.30
pituitary gland, embryo E15.CNhs10592.427-16B954.62
pituitary gland, embryo E16.CNhs11036.449-43F655.12
pituitary gland, embryo E17.CNhs11039.1265-44F552.98
pituitary gland, neonate N00.CNhs11190.1308-22E947.50
placenta, adult pregnant day10.CNhs10472.539-13I729.57
placenta, adult pregnant day17.CNhs10464.577-18G323.73
prostate, adult.CNhs10470.859-1F821.61
skin, adult.CNhs10492.30-1C319.13
skin, neonate N00.CNhs11124.650-25G424.06
skin, neonate N03.CNhs11215.662-22H322.56
skin, neonate N06.CNhs11097.693-20I520.41
skin, neonate N10.CNhs11108.762-6C418.22
small intestine, neonate N16.CNhs11114.790-21I137.31
spinal cord, adult.CNhs10505.24-13C955.63
spleen, adult.CNhs10465.25-2G219.65
spleen, embryo E16.CNhs11035.461-43C140.66
spleen, embryo E18.CNhs11011.1271-21F227.22
spleen, neonate N10.CNhs11116.752-24D121.29
spleen, neonate N20.CNhs11112.824-19H119.68
spleen, neonate N25.CNhs11099.1354-25G321.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C633.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C935.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D331.09
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E346.98
stomach, embryo E15.CNhs10603.1252-16G833.95
stomach, embryo E16.CNhs11022.459-17D431.21
stomach, embryo E17.CNhs11006.1035-18D523.00
stomach, embryo E18.CNhs10999.1286-20C631.01
stomach, neonate N03.CNhs11193.1340-24B825.22
stomach, neonate N07.CNhs11210.718-18A926.04
stomach, neonate N25.CNhs11104.1355-25E420.68
stomach, neonate N30.CNhs11134.1386-42I128.00
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G583.99
testis, embryo E13.CNhs11031.389-23F545.00
testis, embryo E15.CNhs11034.443-27C541.03
testis, embryo E16.CNhs11033.470-26G532.67
testis, embryo E17.CNhs11029.486-18I541.20
testis, embryo E18.CNhs11027.503-18G529.23
testis, neonate N00.CNhs11189.1300-22B730.75
testis, neonate N07.CNhs11222.726-26I435.81
testis, neonate N10.CNhs11204.763-44D934.81
testis, neonate N20.CNhs11110.839-18H364.26
testis, neonate N30.CNhs11130.1391-42E261.06
thymus, adult.CNhs10471.38-12B536.66
thymus, embryo E14.CNhs11041.402-44I440.55
thymus, embryo E15.CNhs11005.430-45I230.20
thymus, embryo E16.CNhs11002.456-26C529.88
thymus, embryo E17.CNhs10581.478-18C132.40
thymus, embryo E18.CNhs10595.1273-19G433.78
thymus, neonate N02.CNhs11181.1541-43F834.26
thymus, neonate N03.CNhs11137.2104-43C730.42
thymus, neonate N06.CNhs11197.681-26C437.26
thymus, neonate N07.CNhs11211.713-19D336.96
thymus, neonate N10.CNhs11194.748-24E431.56
thymus, neonate N20.CNhs11186.820-7A232.26
thymus, neonate N25.CNhs11125.1362-25G730.79
thymus, neonate N30.CNhs11132.1393-42G234.24
tongue, adult.CNhs10499.32-1B426.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E428.21
uterus, adult pregnant day19.CNhs10497.590-15F527.40
uterus, adult.CNhs10509.92-27E534.07
vagina, adult.CNhs10502.89-27D517.15
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A168.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A264.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A368.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A479.47
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A588.38
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A678.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A767.10
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A858.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A966.27
whole body, embryo E11.CNhs11014.324-5I853.76
whole body, embryo E12.CNhs10587.857-27C954.27
whole body, embryo E13.CNhs10512.372-23H240.81
whole body, embryo E14.5.CNhs10578.420-27D227.71
whole body, embryo E14.CNhs10519.395-14B142.34
whole body, embryo E16.CNhs10514.453-14F244.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G533.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.29
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.94
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G537.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.90
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G531.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G534.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G534.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G533.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.25
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G531.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.96
whole body, embryo E17.5.CNhs10513.490-9F933.37
whole body, embryo E17.CNhs10517.475-3I540.47
whole body, embryo E18.CNhs10516.493-3B331.81
whole body, neonate N00.CNhs10525.657-19C230.94
whole body, neonate N01.CNhs10576.659-23C632.33
whole body, neonate N06.CNhs10515.692-21D126.69
whole body, neonate N10.CNhs10518.761-6B427.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.13e-1123
neuroblast (sensu Vertebrata)5.13e-1123
neuron4.19e-0933
neuronal stem cell4.19e-0933
neuroblast4.19e-0933
electrically signaling cell4.19e-0933
electrically responsive cell7.46e-0939
electrically active cell7.46e-0939

Uber anatomy
Ontology termp-valuen
neurectoderm2.67e-2564
neural plate2.67e-2564
presumptive neural plate2.67e-2564
regional part of nervous system7.95e-2354
structure with developmental contribution from neural crest1.19e-2292
neural tube1.69e-2252
neural rod1.69e-2252
future spinal cord1.69e-2252
neural keel1.69e-2252
pre-chordal neural plate4.53e-2249
central nervous system7.83e-2173
ecto-epithelium1.39e-2073
brain1.59e-2047
future brain1.59e-2047
regional part of brain7.83e-2046
nervous system1.73e-1975
anterior neural tube6.57e-1940
regional part of forebrain2.50e-1839
forebrain2.50e-1839
future forebrain2.50e-1839
ectoderm-derived structure2.57e-1795
ectoderm2.57e-1795
presumptive ectoderm2.57e-1795
gray matter3.95e-1634
brain grey matter3.65e-1429
regional part of telencephalon3.65e-1429
telencephalon3.65e-1429
tube8.55e-13114
anatomical conduit7.94e-11122
cerebral cortex4.83e-1021
cerebral hemisphere4.83e-1021
pallium4.83e-1021
epithelium2.27e-08174
regional part of cerebral cortex2.47e-0817
cell layer6.77e-08176
occipital lobe1.90e-0710
visual cortex1.90e-0710
neocortex1.90e-0710
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