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FFCP PHASE1:Mm9::chr8:59934837..59934881,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:59934837..59934881,+
|DHSsupport=NA
|short_description=p1@Scrg1
|DPIdataset=NA
|description=CAGE_peak_1_at_Scrg1_5end
|association_with_transcript=117bp_to_ENSMUST00000034023,NM_009136,uc009lst.1_5end
|EntrezGene=20284
|EntrezGene=20284
|HGNC=
|HGNC=
|MCL_coexpression_id=1202
|TSSclassifier=NA
|UniProt=O88745,Q543T5
|UniProt=O88745,Q543T5
|association_with_transcript=117bp_to_ENSMUST00000034023,NM_009136,uc009lst.1_5end
|cluster_id=chr8:59934837..59934881,+
|description=CAGE_peak_1_at_Scrg1_5end
|id=chr8:59934837..59934881,+
|ontology_enrichment_celltype=CL:0002319!5.13e-17!43;CL:0000221!6.60e-17!44;CL:0000133!6.60e-17!44;CL:0000055!1.55e-13!50;CL:0000540!5.39e-12!33;CL:0000047!5.39e-12!33;CL:0000031!5.39e-12!33;CL:0000404!5.39e-12!33;CL:0000117!4.17e-10!23;CL:0000337!4.17e-10!23;CL:0000393!1.41e-09!39;CL:0000211!1.41e-09!39
|ontology_enrichment_celltype_v019_2=CL:0002319,5.30e-19,43;CL:0000221,3.44e-18,44;CL:0000133,3.44e-18,44;CL:0000540,1.24e-13,33;CL:0000047,1.24e-13,33;CL:0000031,1.24e-13,33;CL:0000404,1.24e-13,33;CL:0000117,8.09e-12,23;CL:0000337,8.09e-12,23;CL:0000393,4.47e-11,39;CL:0000211,4.47e-11,39;CL:0002453,1.12e-07,8;CL:0002321,6.93e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.56e-30!102;UBERON:0000924!2.56e-30!102;UBERON:0006601!2.56e-30!102;UBERON:0001017!1.85e-29!73;UBERON:0005743!1.85e-29!73;UBERON:0000073!2.18e-29!75;UBERON:0001016!2.18e-29!75;UBERON:0002346!1.40e-22!71;UBERON:0003075!1.40e-22!71;UBERON:0007284!1.40e-22!71;UBERON:0001049!9.24e-21!52;UBERON:0005068!9.24e-21!52;UBERON:0006241!9.24e-21!52;UBERON:0007135!9.24e-21!52;UBERON:0000955!2.87e-19!50;UBERON:0006238!2.87e-19!50;UBERON:0002616!1.16e-18!49;UBERON:0000033!3.79e-18!63;UBERON:0002020!6.15e-18!34;UBERON:0002791!7.57e-15!29;UBERON:0003528!7.57e-15!29;UBERON:0001893!7.57e-15!29;UBERON:0003056!3.83e-13!49;UBERON:0003080!3.84e-13!40;UBERON:0002780!1.19e-12!39;UBERON:0001890!1.19e-12!39;UBERON:0006240!1.19e-12!39;UBERON:0000956!5.44e-11!21;UBERON:0001869!5.44e-11!21;UBERON:0000203!5.44e-11!21;UBERON:0002619!2.71e-10!17;UBERON:0003076!7.77e-09!12;UBERON:0003057!7.77e-09!12;UBERON:0000153!1.33e-08!94;UBERON:0007811!9.73e-08!86;UBERON:0002021!5.47e-07!10;UBERON:0000411!5.47e-07!10;UBERON:0001950!5.47e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.49e-33,73;UBERON:0001016,8.02e-33,75;UBERON:0004121,4.95e-29,95;UBERON:0000924,4.95e-29,95;UBERON:0006601,4.95e-29,95;UBERON:0000073,5.92e-25,54;UBERON:0001049,1.16e-23,52;UBERON:0005068,1.16e-23,52;UBERON:0006241,1.16e-23,52;UBERON:0007135,1.16e-23,52;UBERON:0002346,7.86e-22,64;UBERON:0003075,7.86e-22,64;UBERON:0007284,7.86e-22,64;UBERON:0002020,3.19e-21,34;UBERON:0010371,3.29e-21,73;UBERON:0000955,8.65e-20,47;UBERON:0006238,8.65e-20,47;UBERON:0002616,4.36e-19,46;UBERON:0003528,1.65e-17,29;UBERON:0002791,1.65e-17,29;UBERON:0001893,1.65e-17,29;UBERON:0010314,4.48e-16,92;UBERON:0003080,1.23e-14,40;UBERON:0002780,4.70e-14,39;UBERON:0001890,4.70e-14,39;UBERON:0006240,4.70e-14,39;UBERON:0003056,1.31e-13,49;UBERON:0000956,7.04e-13,21;UBERON:0001869,7.04e-13,21;UBERON:0000203,7.04e-13,21;UBERON:0002619,4.83e-12,17;UBERON:0003076,2.70e-10,12;UBERON:0003057,2.70e-10,12;UBERON:0002021,4.42e-08,10;UBERON:0000411,4.42e-08,10;UBERON:0001950,4.42e-08,10
|phase1_expression=1.76163731815273,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.8504383026274,98.3293455275814,135.546374747169,144.266985113118,53.0548537960124,57.5010257459886,0,0,0,1.54355661621568,0.286533439938757,2.57836046138721,4.85559506063035,2.64495489636016,5.07065122804943,2.03306719241479,2.66788438833342,0.449949858640699,0.988866362566974,0,167.17686166927,201.714610293816,1.24427534770173,4.05017814995072,2.94454945891935,175.961006392743,173.602673187968,6.1245399607477,4.02550978276593,8.27296907949019,58.361416929676,54.7778680385455,69.8909726315908,5.14356522147756,5.6722339033494,6.77187381723788,66.1663707633273,76.5357149643085,70.1343957295558,65.9968031461016,77.3078226739129,5.96478226640962,0.605809546665472,2.04043212288321,0,0,0,0,0,0,6.03911006566533,0,0,0,0.845060518660083,0,0,0,0,0,0,3.53970027129086,0,1.92974780784272,3.99016251562112,5.1759131313064,5.99600292865752,6.33035090321015,5.17390311397101,2.01066546127481,0,0.722996784599558,7.07688441559899,66.80970902828,18.7715290691335,29.0925151881133,0,76.4157880200138,75.4008144528438,0.255457055208591,0,0,0,43.5890760668034,80.5201060960783,29.4031183944103,75.0921063230634,73.1346207964745,51.3236470062113,97.9937228929256,0.203678727700633,18.1634177090736,0,2.94618598241064,0.260240885925407,0.229902104433473,0.540186389416048,1.35634336052144,1.76894897793452,1.66547836370305,2.06143794031403,9.57202471734358,0,1.13463648100692,3.87092473160687,18.6316372563439,10.8438427197983,26.1189124891625,30.8673204611915,0,0,0,0,0.414251545071004,0.469052119962192,1.80062061461015,0.946978942340841,0.590292695242212,0.771335564436891,0.697601834251224,1.3413670069981,0.467061369468678,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,89.16293819119,32.0033344499575,0,1.32225283331772,0.213288250535234,1.16118335930219,0.257734922644187,0.201683524623343,0.667134131534611,0.570676878337677,0,1.64698954724011,1.25667604400135,0.795825888164603,0.779856348476481,0.898819408654221,0.648414149624083,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.325929952884052,1.01847051465113,0.234690248288502,0,0.714130922658041,0.390267295715598,0.157635144106191,0,0.478364305972461,0.81931657357869,3.28101465545202,0.578596234326046,0,0,0,0.551873492609465,68.8762031047628,115.336299606728,0,5.30188947129183,1.26203287766503,0.390438744296638,3.44677436372478,13.860190281248,12.9223230967789,18.1168979704853,4.04810701674894,5.84511715822624,5.92931666919785,66.5135124993141,0,0.534196811001766,0.81443479676788,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,0,0.857348140126369,0.177340233642274,0,1.81003922662333,3.95804433848979,0,0,0,3.13283880588812,1.13025098687134,4.04096597018644,2.74556391207214,4.92422699235184,0.582961673259701,137.400148789788,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.73984796469624,0.813277868507395,0.648032044930808,0.209088296014469,0,0.404593039154462,0.578574190077352,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0,0,0.314578033277133,0,0.288030006257865,0,0,0.513554785824136,0,0,0.39736270956253,0,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,94.3135577170501,79.6362659157416,79.6324763680761,80.5991425191895,45.900528824633,43.8128460486026,48.60162001669,59.8927200288213,39.87653199061,31.583379016861,0.62272408550506,0.399024873401031,2.39027048055788,12.1553358534147,3.77303692730368,6.06683577885047,3.33370091702423,3.09052585858341,4.1719497246936,3.28506375292937,5.32306529769503,2.26351609663291,4.68207537349412,2.4969809437899,4.19278923375977,4.28664322154766,2.66533949673168,2.89363830695558,2.47251540481984,2.94397840268795,2.74295401908332,4.08194354166476,3.57654284920981,2.32554266611726,2.63506265162926,3.13074049199203,2.56099162021882,2.10455769150274,4.6173398707593,4.48913817326191,2.60997039873183,3.34915240076916,1.22769312950907,2.63392630016142,17.3615949883027,11.2414760072076,12.1644436391612,12.247650080753,75.750179499262,41.6917782135884,44.7504922747413
|phase1_expression=1.76163731815273,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.8504383026274,98.3293455275814,135.546374747169,144.266985113118,53.0548537960124,57.5010257459886,0,0,0,1.54355661621568,0.286533439938757,2.57836046138721,4.85559506063035,2.64495489636016,5.07065122804943,2.03306719241479,2.66788438833342,0.449949858640699,0.988866362566974,0,167.17686166927,201.714610293816,1.24427534770173,4.05017814995072,2.94454945891935,175.961006392743,173.602673187968,6.1245399607477,4.02550978276593,8.27296907949019,58.361416929676,54.7778680385455,69.8909726315908,5.14356522147756,5.6722339033494,6.77187381723788,66.1663707633273,76.5357149643085,70.1343957295558,65.9968031461016,77.3078226739129,5.96478226640962,0.605809546665472,2.04043212288321,0,0,0,0,0,0,6.03911006566533,0,0,0,0.845060518660083,0,0,0,0,0,0,3.53970027129086,0,1.92974780784272,3.99016251562112,5.1759131313064,5.99600292865752,6.33035090321015,5.17390311397101,2.01066546127481,0,0.722996784599558,7.07688441559899,66.80970902828,18.7715290691335,29.0925151881133,0,76.4157880200138,75.4008144528438,0.255457055208591,0,0,0,43.5890760668034,80.5201060960783,29.4031183944103,75.0921063230634,73.1346207964745,51.3236470062113,97.9937228929256,0.203678727700633,18.1634177090736,0,2.94618598241064,0.260240885925407,0.229902104433473,0.540186389416048,1.35634336052144,1.76894897793452,1.66547836370305,2.06143794031403,9.57202471734358,0,1.13463648100692,3.87092473160687,18.6316372563439,10.8438427197983,26.1189124891625,30.8673204611915,0,0,0,0,0.414251545071004,0.469052119962192,1.80062061461015,0.946978942340841,0.590292695242212,0.771335564436891,0.697601834251224,1.3413670069981,0.467061369468678,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,89.16293819119,32.0033344499575,0,1.32225283331772,0.213288250535234,1.16118335930219,0.257734922644187,0.201683524623343,0.667134131534611,0.570676878337677,0,1.64698954724011,1.25667604400135,0.795825888164603,0.779856348476481,0.898819408654221,0.648414149624083,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.325929952884052,1.01847051465113,0.234690248288502,0,0.714130922658041,0.390267295715598,0.157635144106191,0,0.478364305972461,0.81931657357869,3.28101465545202,0.578596234326046,0,0,0,0.551873492609465,68.8762031047628,115.336299606728,0,5.30188947129183,1.26203287766503,0.390438744296638,3.44677436372478,13.860190281248,12.9223230967789,18.1168979704853,4.04810701674894,5.84511715822624,5.92931666919785,66.5135124993141,0,0.534196811001766,0.81443479676788,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,0,0.857348140126369,0.177340233642274,0,1.81003922662333,3.95804433848979,0,0,0,3.13283880588812,1.13025098687134,4.04096597018644,2.74556391207214,4.92422699235184,0.582961673259701,137.400148789788,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.73984796469624,0.813277868507395,0.648032044930808,0.209088296014469,0,0.404593039154462,0.578574190077352,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0,0,0.314578033277133,0,0.288030006257865,0,0,0.513554785824136,0,0,0.39736270956253,0,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,94.3135577170501,79.6362659157416,79.6324763680761,80.5991425191895,45.900528824633,43.8128460486026,48.60162001669,59.8927200288213,39.87653199061,31.583379016861,0.62272408550506,0.399024873401031,2.39027048055788,12.1553358534147,3.77303692730368,6.06683577885047,3.33370091702423,3.09052585858341,4.1719497246936,3.28506375292937,5.32306529769503,2.26351609663291,4.68207537349412,2.4969809437899,4.19278923375977,4.28664322154766,2.66533949673168,2.89363830695558,2.47251540481984,2.94397840268795,2.74295401908332,4.08194354166476,3.57654284920981,2.32554266611726,2.63506265162926,3.13074049199203,2.56099162021882,2.10455769150274,4.6173398707593,4.48913817326191,2.60997039873183,3.34915240076916,1.22769312950907,2.63392630016142,17.3615949883027,11.2414760072076,12.1644436391612,12.247650080753,75.750179499262,41.6917782135884,44.7504922747413
|short_description=p1@Scrg1
}}
}}

Latest revision as of 15:37, 25 September 2015

Short description:p1@Scrg1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scrg1_5end
Coexpression cluster:MCL_coexpression_mm9:1202
Association with transcript: 117bp_to_ENSMUST00000034023, NM_009136, uc009lst.1_5end
EntrezGene:Scrg1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scrg1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B768.85
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C298.33
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8135.55
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3144.27
Mouse Astrocytes, donor2.CNhs12078.11552-120C453.05
Mouse Astrocytes, donor3.CNhs12107.11633-122C457.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8167.18
Mouse Microglia, donor2.CNhs12634.11736-123E8201.71
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1175.96
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5173.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D358.36
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F354.78
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D769.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E466.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E576.54
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I670.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D666.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F677.31
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F566.81
bone (os femoris), neonate N16.CNhs11225.1525-43A618.77
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B276.42
cerebellum, neonate N30.CNhs11135.1395-42I275.40
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A443.59
corpus striatum, adult.CNhs10487.19-21D880.52
corpus striatum, neonate N00.CNhs11226.630-43F129.40
cortex, adult.CNhs10473.12-14D575.09
cortex, neonate N30.CNhs11107.1392-42F273.13
diencephalon, adult.CNhs10482.20-12F251.32
diencephalon, neonate N30.CNhs11201.1388-42B297.99
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.16
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A29.57
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A818.63
forelimb, embryo E15.CNhs11007.437-20E710.84
forelimb, embryo E17.CNhs10598.1517-43C426.12
forelimb, embryo E18.CNhs11008.1520-43B530.87
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E889.16
hippocampus, neonate N00.CNhs11228.627-43G132.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C268.88
medulla oblongata, neonate N30.CNhs11200.1396-42A3115.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I966.51
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H34.04
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C9137.40
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A194.31
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A279.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A379.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D780.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.90
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A648.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A759.89
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A839.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F917.36
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B312.16
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C675.75
whole body, neonate N06.CNhs10515.692-21D141.69
whole body, neonate N10.CNhs10518.761-6B444.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.49e-3373
nervous system8.02e-3375
ectoderm-derived structure4.95e-2995
ectoderm4.95e-2995
presumptive ectoderm4.95e-2995
regional part of nervous system5.92e-2554
neural tube1.16e-2352
neural rod1.16e-2352
future spinal cord1.16e-2352
neural keel1.16e-2352
neurectoderm7.86e-2264
neural plate7.86e-2264
presumptive neural plate7.86e-2264
gray matter3.19e-2134
ecto-epithelium3.29e-2173
brain8.65e-2047
future brain8.65e-2047
regional part of brain4.36e-1946
brain grey matter1.65e-1729
regional part of telencephalon1.65e-1729
telencephalon1.65e-1729
structure with developmental contribution from neural crest4.48e-1692
anterior neural tube1.23e-1440
regional part of forebrain4.70e-1439
forebrain4.70e-1439
future forebrain4.70e-1439
pre-chordal neural plate1.31e-1349
cerebral cortex7.04e-1321
cerebral hemisphere7.04e-1321
pallium7.04e-1321
regional part of cerebral cortex4.83e-1217
posterior neural tube2.70e-1012
chordal neural plate2.70e-1012
occipital lobe4.42e-0810
visual cortex4.42e-0810
neocortex4.42e-0810
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