FFCP PHASE1:Mm9::chr8:72758431..72758507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234373 | |EntrezGene=234373 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=D3YVJ0 | |UniProt=D3YVJ0 | ||
|association_with_transcript=-8bp_to_ENSMUST00000145078_5end | |association_with_transcript=-8bp_to_ENSMUST00000145078_5end | ||
|cluster_id=chr8:72758431..72758507,+ | |||
|description=CAGE_peak_2_at_Sugp2_5end | |description=CAGE_peak_2_at_Sugp2_5end | ||
|id=chr8:72758431..72758507,+ | |id=chr8:72758431..72758507,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.88e-14!23;CL:0000337!9.88e-14!23;CL:0000540!1.33e-11!33;CL:0000047!1.33e-11!33;CL:0000031!1.33e-11!33;CL:0000404!1.33e-11!33;CL:0000393!3.16e-07!39;CL:0000211!3.16e-07!39 | |ontology_enrichment_celltype=CL:0000117!9.88e-14!23;CL:0000337!9.88e-14!23;CL:0000540!1.33e-11!33;CL:0000047!1.33e-11!33;CL:0000031!1.33e-11!33;CL:0000404!1.33e-11!33;CL:0000393!3.16e-07!39;CL:0000211!3.16e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-14,23;CL:0000337,9.57e-14,23;CL:0000540,1.30e-11,33;CL:0000047,1.30e-11,33;CL:0000031,1.30e-11,33;CL:0000404,1.30e-11,33;CL:0000393,3.30e-07,39;CL:0000211,3.30e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.32e-20!71;UBERON:0003075!6.32e-20!71;UBERON:0007284!6.32e-20!71;UBERON:0001017!1.05e-19!73;UBERON:0005743!1.05e-19!73;UBERON:0001049!2.62e-19!52;UBERON:0005068!2.62e-19!52;UBERON:0006241!2.62e-19!52;UBERON:0007135!2.62e-19!52;UBERON:0000073!1.36e-18!75;UBERON:0001016!1.36e-18!75;UBERON:0000955!6.23e-18!50;UBERON:0006238!6.23e-18!50;UBERON:0003056!1.04e-17!49;UBERON:0000033!1.18e-17!63;UBERON:0002616!2.24e-17!49;UBERON:0002020!4.65e-17!34;UBERON:0000153!1.50e-16!94;UBERON:0004121!2.18e-15!102;UBERON:0000924!2.18e-15!102;UBERON:0006601!2.18e-15!102;UBERON:0003080!4.06e-15!40;UBERON:0007811!7.81e-15!86;UBERON:0002780!1.50e-14!39;UBERON:0001890!1.50e-14!39;UBERON:0006240!1.50e-14!39;UBERON:0002791!4.25e-14!29;UBERON:0003528!4.25e-14!29;UBERON:0001893!4.25e-14!29;UBERON:0000956!1.05e-09!21;UBERON:0001869!1.05e-09!21;UBERON:0000203!1.05e-09!21;UBERON:0002619!7.20e-08!17;UBERON:0000479!5.30e-07!349;UBERON:0002021!5.31e-07!10;UBERON:0000411!5.31e-07!10;UBERON:0001950!5.31e-07!10 | |ontology_enrichment_uberon=UBERON:0002346!6.32e-20!71;UBERON:0003075!6.32e-20!71;UBERON:0007284!6.32e-20!71;UBERON:0001017!1.05e-19!73;UBERON:0005743!1.05e-19!73;UBERON:0001049!2.62e-19!52;UBERON:0005068!2.62e-19!52;UBERON:0006241!2.62e-19!52;UBERON:0007135!2.62e-19!52;UBERON:0000073!1.36e-18!75;UBERON:0001016!1.36e-18!75;UBERON:0000955!6.23e-18!50;UBERON:0006238!6.23e-18!50;UBERON:0003056!1.04e-17!49;UBERON:0000033!1.18e-17!63;UBERON:0002616!2.24e-17!49;UBERON:0002020!4.65e-17!34;UBERON:0000153!1.50e-16!94;UBERON:0004121!2.18e-15!102;UBERON:0000924!2.18e-15!102;UBERON:0006601!2.18e-15!102;UBERON:0003080!4.06e-15!40;UBERON:0007811!7.81e-15!86;UBERON:0002780!1.50e-14!39;UBERON:0001890!1.50e-14!39;UBERON:0006240!1.50e-14!39;UBERON:0002791!4.25e-14!29;UBERON:0003528!4.25e-14!29;UBERON:0001893!4.25e-14!29;UBERON:0000956!1.05e-09!21;UBERON:0001869!1.05e-09!21;UBERON:0000203!1.05e-09!21;UBERON:0002619!7.20e-08!17;UBERON:0000479!5.30e-07!349;UBERON:0002021!5.31e-07!10;UBERON:0000411!5.31e-07!10;UBERON:0001950!5.31e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.81e-22,64;UBERON:0003075,2.81e-22,64;UBERON:0007284,2.81e-22,64;UBERON:0000073,2.42e-20,54;UBERON:0001017,1.37e-19,73;UBERON:0001049,3.01e-19,52;UBERON:0005068,3.01e-19,52;UBERON:0006241,3.01e-19,52;UBERON:0007135,3.01e-19,52;UBERON:0001016,1.76e-18,75;UBERON:0003056,9.95e-18,49;UBERON:0002020,4.47e-17,34;UBERON:0010371,5.36e-17,73;UBERON:0004121,1.40e-16,95;UBERON:0000924,1.40e-16,95;UBERON:0006601,1.40e-16,95;UBERON:0000955,2.87e-16,47;UBERON:0006238,2.87e-16,47;UBERON:0002616,1.00e-15,46;UBERON:0003080,3.92e-15,40;UBERON:0002780,1.45e-14,39;UBERON:0001890,1.45e-14,39;UBERON:0006240,1.45e-14,39;UBERON:0003528,4.12e-14,29;UBERON:0002791,4.12e-14,29;UBERON:0001893,4.12e-14,29;UBERON:0010314,2.27e-10,92;UBERON:0000956,1.03e-09,21;UBERON:0001869,1.03e-09,21;UBERON:0000203,1.03e-09,21;UBERON:0002619,7.09e-08,17;UBERON:0002021,5.24e-07,10;UBERON:0000411,5.24e-07,10;UBERON:0001950,5.24e-07,10 | |||
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| ||
|short_description=p2@Sugp2 | |short_description=p2@Sugp2 | ||
}} | }} |
Latest revision as of 17:22, 25 September 2015
Short description: | p2@Sugp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sugp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -8bp_to_ENSMUST00000145078_5end |
EntrezGene: | Sugp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.57e-14 | 23 |
neuroblast (sensu Vertebrata) | 9.57e-14 | 23 |
neuron | 1.30e-11 | 33 |
neuronal stem cell | 1.30e-11 | 33 |
neuroblast | 1.30e-11 | 33 |
electrically signaling cell | 1.30e-11 | 33 |
electrically responsive cell | 3.30e-07 | 39 |
electrically active cell | 3.30e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.81e-22 | 64 |
neural plate | 2.81e-22 | 64 |
presumptive neural plate | 2.81e-22 | 64 |
regional part of nervous system | 2.42e-20 | 54 |
central nervous system | 1.37e-19 | 73 |
neural tube | 3.01e-19 | 52 |
neural rod | 3.01e-19 | 52 |
future spinal cord | 3.01e-19 | 52 |
neural keel | 3.01e-19 | 52 |
nervous system | 1.76e-18 | 75 |
pre-chordal neural plate | 9.95e-18 | 49 |
gray matter | 4.47e-17 | 34 |
ecto-epithelium | 5.36e-17 | 73 |
ectoderm-derived structure | 1.40e-16 | 95 |
ectoderm | 1.40e-16 | 95 |
presumptive ectoderm | 1.40e-16 | 95 |
brain | 2.87e-16 | 47 |
future brain | 2.87e-16 | 47 |
regional part of brain | 1.00e-15 | 46 |
anterior neural tube | 3.92e-15 | 40 |
regional part of forebrain | 1.45e-14 | 39 |
forebrain | 1.45e-14 | 39 |
future forebrain | 1.45e-14 | 39 |
brain grey matter | 4.12e-14 | 29 |
regional part of telencephalon | 4.12e-14 | 29 |
telencephalon | 4.12e-14 | 29 |
structure with developmental contribution from neural crest | 2.27e-10 | 92 |
cerebral cortex | 1.03e-09 | 21 |
cerebral hemisphere | 1.03e-09 | 21 |
pallium | 1.03e-09 | 21 |
regional part of cerebral cortex | 7.09e-08 | 17 |
occipital lobe | 5.24e-07 | 10 |
visual cortex | 5.24e-07 | 10 |
neocortex | 5.24e-07 | 10 |