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FFCP PHASE1:Mm9::chr10:126817647..126817758,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71750
|EntrezGene=71750
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q80TM6
|UniProt=Q80TM6
|association_with_transcript=0bp_to_ENSMUST00000166820_5end
|association_with_transcript=0bp_to_ENSMUST00000166820_5end
|cluster_id=chr10:126817647..126817758,+
|description=CAGE_peak_1_at_R3hdm2_5end
|description=CAGE_peak_1_at_R3hdm2_5end
|id=chr10:126817647..126817758,+
|id=chr10:126817647..126817758,+
|ontology_enrichment_celltype=CL:0000117!1.79e-09!23;CL:0000337!1.79e-09!23
|ontology_enrichment_celltype=CL:0000117!1.79e-09!23;CL:0000337!1.79e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.79e-09,23;CL:0000337,1.79e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!5.14e-15!50;UBERON:0006238!5.14e-15!50;UBERON:0001049!8.67e-15!52;UBERON:0005068!8.67e-15!52;UBERON:0006241!8.67e-15!52;UBERON:0007135!8.67e-15!52;UBERON:0002616!2.29e-14!49;UBERON:0002020!3.19e-14!34;UBERON:0001017!4.28e-14!73;UBERON:0005743!4.28e-14!73;UBERON:0000033!4.50e-14!63;UBERON:0000073!1.82e-13!75;UBERON:0001016!1.82e-13!75;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0004121!1.66e-12!102;UBERON:0000924!1.66e-12!102;UBERON:0006601!1.66e-12!102;UBERON:0004111!5.20e-12!122;UBERON:0000025!1.01e-11!114;UBERON:0003080!4.69e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0002346!2.59e-10!71;UBERON:0003075!2.59e-10!71;UBERON:0007284!2.59e-10!71;UBERON:0003056!5.98e-10!49;UBERON:0000956!1.43e-09!21;UBERON:0001869!1.43e-09!21;UBERON:0000203!1.43e-09!21;UBERON:0007811!2.29e-09!86;UBERON:0002619!3.40e-08!17;UBERON:0000153!1.63e-07!94;UBERON:0002021!2.56e-07!10;UBERON:0000411!2.56e-07!10;UBERON:0001950!2.56e-07!10;UBERON:0000477!3.11e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.36e-16,54;UBERON:0001049,8.67e-15,52;UBERON:0005068,8.67e-15,52;UBERON:0006241,8.67e-15,52;UBERON:0007135,8.67e-15,52;UBERON:0002020,3.19e-14,34;UBERON:0001017,4.28e-14,73;UBERON:0004121,6.14e-14,95;UBERON:0000924,6.14e-14,95;UBERON:0006601,6.14e-14,95;UBERON:0001016,1.82e-13,75;UBERON:0000955,3.42e-13,47;UBERON:0006238,3.42e-13,47;UBERON:0003528,1.23e-12,29;UBERON:0002791,1.23e-12,29;UBERON:0001893,1.23e-12,29;UBERON:0002616,1.44e-12,46;UBERON:0002346,5.12e-12,64;UBERON:0003075,5.12e-12,64;UBERON:0007284,5.12e-12,64;UBERON:0004111,5.20e-12,122;UBERON:0010314,5.78e-12,92;UBERON:0010371,8.74e-12,73;UBERON:0000025,1.01e-11,114;UBERON:0003080,4.69e-11,40;UBERON:0002780,1.23e-10,39;UBERON:0001890,1.23e-10,39;UBERON:0006240,1.23e-10,39;UBERON:0003056,5.98e-10,49;UBERON:0000956,1.43e-09,21;UBERON:0001869,1.43e-09,21;UBERON:0000203,1.43e-09,21;UBERON:0002619,3.40e-08,17;UBERON:0002021,2.56e-07,10;UBERON:0000411,2.56e-07,10;UBERON:0001950,2.56e-07,10
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|phase1_expression=19.5381593467849,18.1467211972468,25.0249581664245,29.9439569193762,27.5492651470491,17.4594442788365,15.4184342793047,10.3298658753261,10.559154161375,10.5329036844897,12.4989116804619,11.7265073723145,11.4704489053908,12.7633787531736,21.6521345180181,16.8054471933556,13.2916756844348,20.5050407482854,20.8413939080723,14.004858509335,34.4425325111833,9.82980416888764,7.31359409589019,14.3993180514066,11.0116454912242,17.8011908875656,12.4920978886132,14.2211013572687,13.4916627814025,18.6502296022349,9.5344119581781,10.1604907753541,15.9916844771988,31.6963362030877,14.1537293678125,11.137721239019,14.2918549383658,28.4601508901097,23.440060335714,24.0820922227947,32.3527318417058,28.0048648832963,34.9567454182431,20.5211813300191,24.8373481487811,26.0636388069588,29.7308710852255,18.3141131359575,25.4835971971987,18.4708404120569,19.0381533410493,31.6255641602937,16.1071301815427,21.7608642603403,17.8129713545506,10.5476368774738,21.4900079954068,13.4074743992135,33.3822160418336,26.4495489636016,32.3254015788151,16.2645375393183,17.7858959222228,27.8968912357234,16.8107281636386,25.5772841380596,18.5752068521411,26.8952813725088,32.2474694279366,33.8864905212544,30.9177693186532,29.9933533623994,26.5042249141936,30.3777182053086,41.4052434798781,35.8495326777908,51.7544640697127,59.2469248715271,56.3735977050414,35.6092976871523,45.2863835831928,37.5057626800867,32.943593882163,28.138130501584,43.2419041208373,38.8909732825241,37.301380369365,35.6022941526324,16.7354887266337,21.3867515102203,22.6094301187309,18.0689014166091,14.9593693415705,21.0484244738749,22.7421746106684,31.3618820968135,24.4373291029248,27.0984212899112,25.4590284510811,21.5537140451308,23.380007682929,41.0644727725817,124.854567456256,149.3240076622,9.74209684550464,9.12095515710355,12.6381111253696,23.9786147410026,25.63485048107,29.0946592567057,11.7970022200972,8.52503339273995,20.9860102503013,14.770818774157,28.5740558339763,25.0076516746054,27.1914464507811,33.5470508054195,18.5768215909474,32.6769036893767,34.6721183982818,31.0320162006542,16.775258509631,59.7272825903556,37.4909605196085,16.860165643767,16.2948569328052,11.9980546198682,11.5633906636489,36.3991253753719,32.0250421973039,36.8167251690693,46.5849178115301,49.0973678074235,36.9862719316017,37.9644555578553,20.9789089531652,26.8719056517801,22.492325500597,59.9759289276451,11.1903580947925,7.35686734187113,17.1059023315082,17.9338733224501,29.459804132525,25.2384028961154,33.0767087695843,39.0642089815914,13.5807835547691,13.4265316919152,13.0203831881322,11.3981780862339,12.7901734643775,29.253181987862,24.0765099597294,16.3208098791164,6.31991868581911,9.77922047035918,7.672414483681,20.5054514810147,17.8239805585633,18.5463923304845,25.3316867076175,21.0537727969722,26.0711420779669,26.5088697015465,33.5341751749524,37.3649095574942,35.3803677313983,33.6543301362145,48.2359416797842,40.935996479093,37.9821699453518,52.6089161540657,34.697841513081,34.8846635965774,29.0768529025742,17.7181879664575,11.7308537794379,13.0052536241846,16.8816374331942,17.9498336914775,18.2349995952794,16.3594038456801,12.3377556001573,17.1286912912971,20.6094871216221,22.2831248686089,22.4208700186988,19.7740269903929,17.7233200897249,20.5115511451998,12.3284135619503,17.2515254040691,20.2873924211545,16.2921062276251,18.2315337937568,22.7941414643535,29.3417532256554,27.455487524206,26.8467824608751,21.8412980141587,14.8226313543574,17.1850458887577,12.1866576970186,15.7403478669398,16.4316698324687,12.5412123071257,10.4396599230382,13.2340223227373,18.6455510791291,16.4736847912849,106.388472830242,21.9563159124417,29.3315412727687,21.7217835034516,24.577445652502,22.6748455040783,29.7452636168234,6.44270800019648,13.5260930446881,16.2955282344181,16.4283173801951,27.303519963016,30.9456733151818,31.6116509529634,24.2758121923534,36.3202091023991,36.0367777165921,30.642439851843,31.6013516814589,32.9799853565846,30.1582567878545,14.1415477792864,9.34352118736169,22.9027499432928,32.7523203575096,33.9913891117389,17.8689090460576,44.687354115174,14.8288863125641,12.4940398174924,20.0343759891503,17.9226598464414,23.6166594527338,27.4584234865167,15.7876173653209,16.3663280430335,24.5078422326845,73.9039027770156,26.6847360191545,17.6284947630583,22.1526264720863,36.9533075458479,22.5666735177937,12.1390318077491,16.3254720760966,16.2200368590072,17.1275097870848,25.2096821314021,19.3821219876166,18.5402202033528,23.8853243517763,25.2829406348653,15.8127912862498,13.4076206222643,37.1079170271629,10.8036656418786,12.2890749593617,15.8609405923378,21.4581682707151,16.2315624017884,29.6188237083818,34.1000743008351,20.8857820176702,14.6164128896036,15.4369878638473,49.3009896295025,26.1572371247367,33.292734560342,24.2325858326367,22.1590214655833,22.4440244204985,45.9854748986064,15.7201210334024,16.5109494370578,17.0378965180135,12.4323181623096,16.9500842374071,13.7266903923914,19.0375841593118,15.6745626602497,22.2501957825122,34.3681422485441,12.0207677560831,16.8755157715284,17.0648438498446,12.9634743528971,20.5260809921407,20.9039736896472,19.1756017282779,13.6113089831695,26.1822246049422,27.3389297758247,54.6782150523665,22.7265149986848,14.8912641411388,17.3061557626202,16.0158181112387,19.2609983059487,30.1608103319588,27.2127164323856,25.6905393842992,47.3504876818972,46.6608610137742,17.3806116345498,12.7716885632803,13.8659792172517,15.5904987573354,22.0202835671002,21.6562676711579,21.2745945650345,18.0181223152984,25.5445118368814,22.25238754326,26.3156343207154,28.360243295268,26.0734090845293,22.2066114144981,46.9331894083488,7.32553646134413,6.6388253891012,9.06576928366024,27.432922352571,18.2052001187647,28.2053501371588,24.8667319731716,21.5676004735206,39.5326289831947,43.2705722316746,54.9979692901821,60.8360265496654,45.900528824633,62.6976934833451,58.0519350199353,48.6346899482158,44.8610984894363,50.2227502399265,11.3128208866753,10.7736715818278,10.7562171625105,19.9347507996001,15.7209871970987,21.1420034717516,20.6689456855502,22.6638562962784,19.5760717851007,21.7319602116866,19.5179060915485,22.6351609663291,25.5641315392779,30.2198719350983,30.6705404222975,30.9590899333998,30.3616933975521,30.6725660537291,26.3734976514116,23.699026141638,22.286501405052,21.6520483514392,25.7511085143107,21.8019624948493,21.1746105934494,24.8766947201529,19.3903651245139,18.9410192235247,23.2225034676424,26.9348290395714,23.3710985704623,25.6111654176465,22.0984763311632,25.4096419544984,21.0268205969444,20.2346568129736,16.609144199624,22.9912027831679,31.753863123428,21.1767762354735,19.9406338633562
|short_description=p1@R3hdm2
|short_description=p1@R3hdm2
}}
}}

Latest revision as of 17:47, 25 September 2015

Short description:p1@R3hdm2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_R3hdm2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000166820_5end
EntrezGene:R3hdm2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@R3hdm2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I625.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I427.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.46
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.42
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.73
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I112.49
GP2+ M cell, pool3.CNhs13240.11847-124I214.22
Ileum epithelium, pool1.CNhs13199.10252-104B913.49
Ileum epithelium, pool2.CNhs13232.10253-104C118.65
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H434.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B326.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B729.73
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.48
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.76
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.81
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.49
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C333.38
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D225.58
Mouse Microglia, donor1.CNhs12629.11718-123C818.58
Mouse Microglia, donor2.CNhs12634.11736-123E826.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D930.92
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F241.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D635.85
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D351.75
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F359.25
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D756.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D435.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D837.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I643.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D638.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.60
Mouse Schwann, donor1.CNhs12507.11728-123D916.74
Mouse Schwann, donor2.CNhs12573.11746-123F921.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F631.36
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I727.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H141.06
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8124.85
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6149.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.98
accessory axillary lymph node, adult.CNhs10475.1063-29H925.63
adrenal gland, adult.CNhs10508.49-24D729.09
adrenal gland, embryo E14.CNhs11038.406-44C511.80
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I120.99
adrenal gland, embryo E18.CNhs11026.1262-18F514.77
adrenal gland, neonate N00.CNhs11191.1311-23C128.57
adrenal gland, neonate N25.CNhs11223.1377-27I325.01
amnion, adult pregnant day17.5.CNhs10488.583-22A827.19
aorta, adult.CNhs10498.46-23H133.55
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F532.68
bone (os femoris), neonate N16.CNhs11225.1525-43A634.67
bone (os femoris), neonate N20.CNhs11195.1350-25C331.03
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B259.73
cerebellum, neonate N30.CNhs11135.1395-42I237.49
colon, adult.CNhs10468.36-18H716.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.29
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.56
corpora quadrigemina, adult.CNhs10501.16-22A436.40
corpus striatum, adult.CNhs10487.19-21D832.03
corpus striatum, neonate N00.CNhs11226.630-43F136.82
cortex, adult.CNhs10473.12-14D546.58
cortex, neonate N30.CNhs11107.1392-42F249.10
diencephalon, adult.CNhs10482.20-12F236.99
diencephalon, neonate N30.CNhs11201.1388-42B237.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.87
epididymis, adult.CNhs10490.58-23B222.49
eyeball, adult.CNhs10484.31-12G459.98
eyeball, embryo E12.CNhs11016.345-16C611.19
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C917.11
eyeball, embryo E17.CNhs11023.1261-18D417.93
eyeball, neonate N00.CNhs11207.633-15C629.46
eyeball, neonate N01.CNhs11140.1532-43E725.24
eyeball, neonate N02.CNhs11205.1551-44G833.08
eyeball, neonate N16.CNhs11188.777-19A239.06
forelimb, embryo E11.CNhs10596.335-25E213.58
forelimb, embryo E12.CNhs10600.359-14H213.43
forelimb, embryo E13.CNhs10589.384-1E213.02
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C429.25
forelimb, embryo E18.CNhs11008.1520-43B524.08
gonad, embryo E13.CNhs11044.1564-45I616.32
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.67
heart, embryo E11.CNhs10586.331-24E920.51
heart, embryo E12.CNhs11015.353-12F517.82
heart, embryo E13.CNhs11013.376-3I918.55
heart, embryo E14.CNhs10597.403-26D425.33
heart, embryo E15.CNhs11017.431-16C821.05
heart, embryo E16.CNhs11021.457-17C626.07
heart, embryo E17.CNhs11025.479-18E526.51
heart, embryo E18.CNhs11030.1283-20G333.53
heart, neonate N00.CNhs11213.639-21E337.36
heart, neonate N03.CNhs11221.1349-25I235.38
heart, neonate N10.CNhs11118.749-24G133.65
heart, neonate N16.CNhs11209.782-15G148.24
heart, neonate N20.CNhs11127.821-26I640.94
heart, neonate N25.CNhs11196.1351-25D337.98
heart, neonate N30.CNhs11202.1390-42D252.61
hippocampus, adult.CNhs10478.13-16E834.70
hippocampus, neonate N00.CNhs11228.627-43G134.88
intestinal mucosa, adult.CNhs10506.860-29I329.08
intestine, adult.CNhs10496.178-9A317.72
intestine, embryo E12.CNhs11019.1251-16I511.73
intestine, embryo E13.CNhs11010.381-16D513.01
intestine, embryo E15.CNhs10602.976-16D816.88
intestine, embryo E16.CNhs10585.463-22H417.95
intestine, embryo E17.CNhs10582.482-18D318.23
intestine, embryo E18.CNhs10526.1289-20F716.36
intestine, neonate N00.CNhs11126.644-26D112.34
intestine, neonate N01.CNhs11192.1322-23E917.13
intestine, neonate N06.CNhs11102.688-20B820.61
intestine, neonate N07.CNhs11095.720-20F222.28
intestine, neonate N10.CNhs11098.755-23A522.42
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E317.72
intestine, neonate N30.CNhs11131.1384-42G120.51
kidney, embryo E14.CNhs10606.411-4I912.33
kidney, embryo E15.CNhs10997.434-16F817.25
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C718.23
kidney, neonate N00.CNhs11214.646-21G722.79
kidney, neonate N10.CNhs11206.758-6D529.34
kidney, neonate N20.CNhs11113.832-19I127.46
kidney, neonate N25.CNhs11122.1353-25F326.85
kidney, neonate N30.CNhs11203.1385-42H121.84
liver, adult pregnant day01.CNhs10466.508-5B214.82
liver, embryo E12.CNhs10601.355-15F817.19
liver, embryo E13.CNhs10524.378-3H612.19
liver, embryo E14.CNhs10594.409-16E115.74
liver, embryo E15.CNhs10520.433-16D716.43
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F418.65
liver, neonate N03.CNhs11123.1345-25G216.47
liver, neonate N06.CNhs11101.684-20A8106.39
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B929.33
liver, neonate N20.CNhs11220.823-25A321.72
liver, neonate N25.CNhs11198.1368-26H124.58
liver, neonate N30.CNhs11106.1382-42D122.67
lung, adult.CNhs10474.28-22B129.75
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F813.53
lung, embryo E15.CNhs11020.432-17C516.30
lung, embryo E16.CNhs10998.458-17B616.43
lung, embryo E17.CNhs10605.480-44A627.30
lung, embryo E18.CNhs10583.1287-20I630.95
lung, neonate N00.CNhs11224.640-42C631.61
lung, neonate N06.CNhs11212.683-20E524.28
lung, neonate N07.CNhs11111.715-19A336.32
lung, neonate N10.CNhs11219.750-23E636.04
lung, neonate N20.CNhs11109.822-18A430.64
lung, neonate N25.CNhs11119.1359-25C731.60
lung, neonate N30.CNhs11133.1394-42H232.98
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H222.90
medulla oblongata, adult.CNhs10477.17-12C232.75
medulla oblongata, neonate N30.CNhs11200.1396-42A333.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C244.69
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.37
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.51
olfactory brain, adult.CNhs10489.18-22I973.90
ovary, adult.CNhs10507.91-2I726.68
ovary, embryo E18.CNhs11040.505-44H717.63
ovary, neonate N00.CNhs11217.1299-22I422.15
oviduct, adult pregnant day01.CNhs10500.988-6G636.95
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G317.13
pancreas, embryo E18.CNhs10580.1535-43I725.21
pancreas, neonate N00.CNhs11105.645-26G919.38
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D823.89
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G837.11
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C712.29
pituitary gland, embryo E14.CNhs11037.398-44A515.86
pituitary gland, embryo E15.CNhs10592.427-16B921.46
pituitary gland, embryo E16.CNhs11036.449-43F616.23
pituitary gland, embryo E17.CNhs11039.1265-44F529.62
pituitary gland, neonate N00.CNhs11190.1308-22E934.10
placenta, adult pregnant day10.CNhs10472.539-13I720.89
placenta, adult pregnant day17.CNhs10464.577-18G314.62
prostate, adult.CNhs10470.859-1F815.44
skin, adult.CNhs10492.30-1C349.30
skin, neonate N00.CNhs11124.650-25G426.16
skin, neonate N03.CNhs11215.662-22H333.29
skin, neonate N06.CNhs11097.693-20I524.23
skin, neonate N10.CNhs11108.762-6C422.16
small intestine, neonate N16.CNhs11114.790-21I122.44
spinal cord, adult.CNhs10505.24-13C945.99
spleen, adult.CNhs10465.25-2G215.72
spleen, embryo E16.CNhs11035.461-43C116.51
spleen, embryo E18.CNhs11011.1271-21F217.04
spleen, neonate N10.CNhs11116.752-24D112.43
spleen, neonate N20.CNhs11112.824-19H116.95
spleen, neonate N25.CNhs11099.1354-25G313.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.25
stomach, adult.CNhs10503.33-1H634.37
stomach, embryo E12.CNhs10588.356-43E312.02
stomach, embryo E15.CNhs10603.1252-16G816.88
stomach, embryo E16.CNhs11022.459-17D417.06
stomach, embryo E17.CNhs11006.1035-18D512.96
stomach, embryo E18.CNhs10999.1286-20C620.53
stomach, neonate N03.CNhs11193.1340-24B820.90
stomach, neonate N07.CNhs11210.718-18A919.18
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I126.18
submandibular gland, adult.CNhs10469.59-29C127.34
testis, adult.CNhs10504.57-7G554.68
testis, embryo E13.CNhs11031.389-23F522.73
testis, embryo E15.CNhs11034.443-27C514.89
testis, embryo E16.CNhs11033.470-26G517.31
testis, embryo E17.CNhs11029.486-18I516.02
testis, embryo E18.CNhs11027.503-18G519.26
testis, neonate N00.CNhs11189.1300-22B730.16
testis, neonate N07.CNhs11222.726-26I427.21
testis, neonate N10.CNhs11204.763-44D925.69
testis, neonate N20.CNhs11110.839-18H347.35
testis, neonate N30.CNhs11130.1391-42E246.66
thymus, adult.CNhs10471.38-12B517.38
thymus, embryo E14.CNhs11041.402-44I412.77
thymus, embryo E15.CNhs11005.430-45I213.87
thymus, embryo E16.CNhs11002.456-26C515.59
thymus, embryo E17.CNhs10581.478-18C122.02
thymus, embryo E18.CNhs10595.1273-19G421.66
thymus, neonate N02.CNhs11181.1541-43F821.27
thymus, neonate N03.CNhs11137.2104-43C718.02
thymus, neonate N06.CNhs11197.681-26C425.54
thymus, neonate N07.CNhs11211.713-19D322.25
thymus, neonate N10.CNhs11194.748-24E426.32
thymus, neonate N20.CNhs11186.820-7A228.36
thymus, neonate N25.CNhs11125.1362-25G726.07
thymus, neonate N30.CNhs11132.1393-42G222.21
tongue, adult.CNhs10499.32-1B446.93
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.07
urinary bladder, adult.CNhs10481.879-12E427.43
uterus, adult pregnant day19.CNhs10497.590-15F518.21
uterus, adult.CNhs10509.92-27E528.21
vagina, adult.CNhs10502.89-27D524.87
vesicular gland, adult.CNhs10491.51-27F821.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A139.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A355.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D760.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.90
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A562.70
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A748.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A844.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A950.22
whole body, embryo E11.CNhs11014.324-5I811.31
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H210.76
whole body, embryo E14.5.CNhs10578.420-27D219.93
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F221.14
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.73
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.70
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.75
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.17
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G525.41
whole body, embryo E17.5.CNhs10513.490-9F921.03
whole body, embryo E17.CNhs10517.475-3I520.23
whole body, embryo E18.CNhs10516.493-3B316.61
whole body, neonate N00.CNhs10525.657-19C222.99
whole body, neonate N01.CNhs10576.659-23C631.75
whole body, neonate N06.CNhs10515.692-21D121.18
whole body, neonate N10.CNhs10518.761-6B419.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.79e-0923
neuroblast (sensu Vertebrata)1.79e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.36e-1654
neural tube8.67e-1552
neural rod8.67e-1552
future spinal cord8.67e-1552
neural keel8.67e-1552
gray matter3.19e-1434
central nervous system4.28e-1473
ectoderm-derived structure6.14e-1495
ectoderm6.14e-1495
presumptive ectoderm6.14e-1495
nervous system1.82e-1375
brain3.42e-1347
future brain3.42e-1347
brain grey matter1.23e-1229
regional part of telencephalon1.23e-1229
telencephalon1.23e-1229
regional part of brain1.44e-1246
neurectoderm5.12e-1264
neural plate5.12e-1264
presumptive neural plate5.12e-1264
anatomical conduit5.20e-12122
structure with developmental contribution from neural crest5.78e-1292
ecto-epithelium8.74e-1273
tube1.01e-11114
anterior neural tube4.69e-1140
regional part of forebrain1.23e-1039
forebrain1.23e-1039
future forebrain1.23e-1039
pre-chordal neural plate5.98e-1049
cerebral cortex1.43e-0921
cerebral hemisphere1.43e-0921
pallium1.43e-0921
regional part of cerebral cortex3.40e-0817
occipital lobe2.56e-0710
visual cortex2.56e-0710
neocortex2.56e-0710
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