FFCP PHASE2:Mm9::chr3:86724752..86724899,-: Difference between revisions
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=70762 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q6PGN3 | ||
|association_with_transcript=0bp_to_ENSMUST00000029719,ENSMUST00000094144,ENSMUST00000169835,NM_001195496,NM_001195497,NM_001195498,NM_001195499,NM_001195500,NM_027539,uc008prl.3,uc008prm.3,uc008prn.3,uc008pro.3,uc008prp.3,uc008prq.3,uc008prr.3_5end | |association_with_transcript=0bp_to_ENSMUST00000029719,ENSMUST00000094144,ENSMUST00000169835,NM_001195496,NM_001195497,NM_001195498,NM_001195499,NM_001195500,NM_027539,uc008prl.3,uc008prm.3,uc008prn.3,uc008pro.3,uc008prp.3,uc008prq.3,uc008prr.3_5end | ||
|cluster_id=chr3:86724752..86724899,- | |cluster_id=chr3:86724752..86724899,- | ||
Latest revision as of 18:55, 25 September 2015
| Short description: | p1@Dclk2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Dclk2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:22 |
| Association with transcript: | 0bp_to_ENSMUST00000029719, ENSMUST00000094144, ENSMUST00000169835, NM_001195496, NM_001195497, NM_001195498, NM_001195499, NM_001195500, NM_027539, uc008prl.3, uc008prm.3, uc008prn.3, uc008pro.3, uc008prp.3, uc008prq.3, uc008prr.3_5end |
| EntrezGene: | Dclk2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ectodermal cell | 1.18e-18 | 44 |
| neurectodermal cell | 1.18e-18 | 44 |
| neural cell | 3.58e-18 | 43 |
| neuron | 5.19e-18 | 33 |
| neuronal stem cell | 5.19e-18 | 33 |
| neuroblast | 5.19e-18 | 33 |
| electrically signaling cell | 5.19e-18 | 33 |
| electrically responsive cell | 9.60e-16 | 39 |
| electrically active cell | 9.60e-16 | 39 |
| CNS neuron (sensu Vertebrata) | 5.82e-15 | 23 |
| neuroblast (sensu Vertebrata) | 5.82e-15 | 23 |
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 1.67e-34 | 75 |
| central nervous system | 1.93e-34 | 73 |
| ectoderm-derived structure | 5.62e-32 | 95 |
| ectoderm | 5.62e-32 | 95 |
| presumptive ectoderm | 5.62e-32 | 95 |
| neurectoderm | 4.58e-28 | 64 |
| neural plate | 4.58e-28 | 64 |
| presumptive neural plate | 4.58e-28 | 64 |
| regional part of nervous system | 1.28e-25 | 54 |
| ecto-epithelium | 2.91e-25 | 73 |
| neural tube | 1.91e-24 | 52 |
| neural rod | 1.91e-24 | 52 |
| future spinal cord | 1.91e-24 | 52 |
| neural keel | 1.91e-24 | 52 |
| pre-chordal neural plate | 7.20e-22 | 49 |
| brain | 2.11e-21 | 47 |
| future brain | 2.11e-21 | 47 |
| regional part of brain | 1.07e-20 | 46 |
| gray matter | 1.32e-19 | 34 |
| anterior neural tube | 1.83e-19 | 40 |
| structure with developmental contribution from neural crest | 3.19e-19 | 92 |
| regional part of forebrain | 6.46e-19 | 39 |
| forebrain | 6.46e-19 | 39 |
| future forebrain | 6.46e-19 | 39 |
| brain grey matter | 1.88e-16 | 29 |
| regional part of telencephalon | 1.88e-16 | 29 |
| telencephalon | 1.88e-16 | 29 |
| cerebral cortex | 7.67e-12 | 21 |
| cerebral hemisphere | 7.67e-12 | 21 |
| pallium | 7.67e-12 | 21 |
| regional part of cerebral cortex | 2.19e-09 | 17 |
