FFCP PHASE1:Mm9::chr2:134469815..134469845,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52837 | |EntrezGene=52837 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=A2ARI1 | |UniProt=A2ARI1 | ||
|association_with_transcript=0bp_to_ENSMUST00000110119_5end | |association_with_transcript=0bp_to_ENSMUST00000110119_5end | ||
|cluster_id=chr2:134469815..134469845,- | |||
|description=CAGE_peak_3_at_Tmx4_5end | |description=CAGE_peak_3_at_Tmx4_5end | ||
|id=chr2:134469815..134469845,- | |id=chr2:134469815..134469845,- | ||
|ontology_enrichment_celltype=CL:0000117!1.53e-08!23;CL:0000337!1.53e-08!23;CL:0000540!1.61e-07!33;CL:0000047!1.61e-07!33;CL:0000031!1.61e-07!33;CL:0000404!1.61e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.53e-08!23;CL:0000337!1.53e-08!23;CL:0000540!1.61e-07!33;CL:0000047!1.61e-07!33;CL:0000031!1.61e-07!33;CL:0000404!1.61e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-08,23;CL:0000337,1.52e-08,23;CL:0000540,1.60e-07,33;CL:0000047,1.60e-07,33;CL:0000031,1.60e-07,33;CL:0000404,1.60e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.47e-18!52;UBERON:0005068!7.47e-18!52;UBERON:0006241!7.47e-18!52;UBERON:0007135!7.47e-18!52;UBERON:0002346!1.00e-17!71;UBERON:0003075!1.00e-17!71;UBERON:0007284!1.00e-17!71;UBERON:0001017!2.34e-17!73;UBERON:0005743!2.34e-17!73;UBERON:0000955!2.53e-17!50;UBERON:0006238!2.53e-17!50;UBERON:0000033!5.29e-17!63;UBERON:0002616!1.02e-16!49;UBERON:0000073!1.56e-16!75;UBERON:0001016!1.56e-16!75;UBERON:0000025!6.67e-16!114;UBERON:0003056!8.91e-15!49;UBERON:0003080!7.36e-14!40;UBERON:0004111!1.26e-13!122;UBERON:0002020!2.74e-13!34;UBERON:0004121!2.80e-13!102;UBERON:0000924!2.80e-13!102;UBERON:0006601!2.80e-13!102;UBERON:0002780!3.36e-13!39;UBERON:0001890!3.36e-13!39;UBERON:0006240!3.36e-13!39;UBERON:0002791!5.82e-11!29;UBERON:0003528!5.82e-11!29;UBERON:0001893!5.82e-11!29;UBERON:0000477!9.77e-08!154;UBERON:0007811!1.00e-07!86;UBERON:0002021!4.67e-07!10;UBERON:0000411!4.67e-07!10;UBERON:0001950!4.67e-07!10;UBERON:0002619!7.81e-07!17;UBERON:0000956!8.59e-07!21;UBERON:0001869!8.59e-07!21;UBERON:0000203!8.59e-07!21 | |ontology_enrichment_uberon=UBERON:0001049!7.47e-18!52;UBERON:0005068!7.47e-18!52;UBERON:0006241!7.47e-18!52;UBERON:0007135!7.47e-18!52;UBERON:0002346!1.00e-17!71;UBERON:0003075!1.00e-17!71;UBERON:0007284!1.00e-17!71;UBERON:0001017!2.34e-17!73;UBERON:0005743!2.34e-17!73;UBERON:0000955!2.53e-17!50;UBERON:0006238!2.53e-17!50;UBERON:0000033!5.29e-17!63;UBERON:0002616!1.02e-16!49;UBERON:0000073!1.56e-16!75;UBERON:0001016!1.56e-16!75;UBERON:0000025!6.67e-16!114;UBERON:0003056!8.91e-15!49;UBERON:0003080!7.36e-14!40;UBERON:0004111!1.26e-13!122;UBERON:0002020!2.74e-13!34;UBERON:0004121!2.80e-13!102;UBERON:0000924!2.80e-13!102;UBERON:0006601!2.80e-13!102;UBERON:0002780!3.36e-13!39;UBERON:0001890!3.36e-13!39;UBERON:0006240!3.36e-13!39;UBERON:0002791!5.82e-11!29;UBERON:0003528!5.82e-11!29;UBERON:0001893!5.82e-11!29;UBERON:0000477!9.77e-08!154;UBERON:0007811!1.00e-07!86;UBERON:0002021!4.67e-07!10;UBERON:0000411!4.67e-07!10;UBERON:0001950!4.67e-07!10;UBERON:0002619!7.81e-07!17;UBERON:0000956!8.59e-07!21;UBERON:0001869!8.59e-07!21;UBERON:0000203!8.59e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.18e-21,92;UBERON:0000073,3.16e-19,54;UBERON:0002346,4.43e-18,64;UBERON:0003075,4.43e-18,64;UBERON:0007284,4.43e-18,64;UBERON:0001049,7.37e-18,52;UBERON:0005068,7.37e-18,52;UBERON:0006241,7.37e-18,52;UBERON:0007135,7.37e-18,52;UBERON:0001017,2.31e-17,73;UBERON:0001016,1.54e-16,75;UBERON:0000025,6.59e-16,114;UBERON:0000955,2.20e-15,47;UBERON:0006238,2.20e-15,47;UBERON:0002616,8.50e-15,46;UBERON:0003056,8.81e-15,49;UBERON:0010371,1.83e-14,73;UBERON:0003080,7.28e-14,40;UBERON:0004111,1.27e-13,122;UBERON:0002020,2.71e-13,34;UBERON:0002780,3.33e-13,39;UBERON:0001890,3.33e-13,39;UBERON:0006240,3.33e-13,39;UBERON:0004121,4.24e-13,95;UBERON:0000924,4.24e-13,95;UBERON:0006601,4.24e-13,95;UBERON:0003528,5.78e-11,29;UBERON:0002791,5.78e-11,29;UBERON:0001893,5.78e-11,29;UBERON:0002021,4.65e-07,10;UBERON:0000411,4.65e-07,10;UBERON:0001950,4.65e-07,10;UBERON:0002619,7.78e-07,17;UBERON:0000956,8.56e-07,21;UBERON:0001869,8.56e-07,21;UBERON:0000203,8.56e-07,21 | |||
|phase1_expression=7.8472935081349,0,0.454999239389536,0.90739263392049,0,1.34303417529512,0.700837921786577,4.9066862907799,1.97104211012333,2.34064526321993,1.36974374580404,0.558405112967355,4.28001824828014,5.68232615723483,12.6581709489952,13.7683181825082,12.5921138063066,3.15462165358238,3.01651753932625,2.12194825899015,7.48380953329414,4.66667470644161,1.30599894569468,0.319984845586813,0.68822784320151,0,0.430761996159075,0.430942465371778,0.570070258369122,1.26015064879965,0.665191531965914,2.54012269383853,2.46025915033828,0,1.1554064790051,1.49611180822643,1.83752420636132,25.9489611056883,25.7840663692854,28.2702821745851,38.2350467220159,25.2726829434625,26.2175590636823,5.41356317294982,5.17022349219524,4.77221555620372,3.9119567217402,2.18025156380447,3.29529274101708,5.44403717407994,2.79972843250725,1.43752564364972,2.34895648480831,5.07753499407941,2.01656279485478,2.57259436035947,3.43840127926508,2.06268836910977,13.7575193384526,15.869729378161,6.97214543856797,1.35537812827653,0,0.899899717281399,2.96659908770092,3.5524005747305,1.79760066311043,1.92109152660777,5.91030790158323,4.05017814995072,5.04779907243317,18.5673139862472,17.0068776532742,6.00204916153275,5.36734637702124,6.43453150627015,37.4393995397922,41.1153228634304,33.7934373163736,17.9365351313064,16.4677758484337,18.7528813400434,28.1974828991395,41.0816705323126,40.0331409175242,19.1508580557884,21.4981238006645,14.1663578827228,1.8931548333296,5.06329452715463,7.53647670624362,2.58127163094416,3.39985666853875,3.77792234146472,4.54843492213368,4.48026887097336,4.63466586434781,3.06774580640504,2.33807404142582,0.70667914902068,5.7745802108439,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,1.01104889002957,5.1382745873577,2.84831672011889,6.97678053604676,5.20455980298408,5.1759131313064,5.07354093963329,4.06951129492081,5.52666923537813,5.6549966098354,2.22475470960936,8.09756398751505,6.19227386364912,6.30890714794896,4.63767188766826,7.75800405016355,1.86391761218122,22.2513405728776,23.6674778699204,0.766371165625774,9.10594946244994,3.59941638596045,8.76784566804146,41.7915883939455,40.2600530480391,23.120400788767,37.8937018019163,46.0287823194595,31.7915708176127,44.2918648174978,7.73979165262404,6.46916247172484,4.29628689337247,6.31325567659422,4.16385417480652,5.0578462975364,5.40186389416048,7.08312643827861,8.50456239391598,9.09607414022434,8.90166383317424,10.0894314588216,2.58681591519411,2.83659120251729,4.39877810409872,1.7535658594206,2.50242524303038,4.52727816478817,3.2925141825271,4.37875387000685,15.4486901208912,12.610047448621,15.344828967362,6.62802472113606,9.38104239924385,9.18316513451176,9.70653415899362,10.4285042826124,9.56456099901745,8.8362899005155,10.1943892531855,8.29033930806903,10.8609500942897,13.4617320544858,9.40398190731926,9.0643992203706,10.0993053033883,7.64976586934119,40.1653801757483,14.6124549578584,0,0,4.90562976231038,3.71578674976702,3.73715637834071,2.21851877085677,3.55804870151792,2.28270751335071,2.37264530772256,3.12928013975621,3.2673577144035,6.76452004939913,3.70431765526328,5.39291645192533,1.51296634912286,1.99141273254367,2.0863469104839,4.91268604221834,0,2.64746726198909,3.68509725618489,5.75113723100612,5.94423448968019,5.60918562322488,6.27994911365499,4.81248939295022,1.48226313543574,4.83850806576673,3.34150291692445,7.19558759631532,6.28866376304359,5.06472035480075,5.85639459097266,2.5892652370573,8.2688965655268,6.31491250332587,8.62609239164127,7.07067800570156,3.74445207737473,5.30415643688935,2.15276896226295,3.85954817090694,4.43407656399851,5.49525094134406,4.23708938749267,3.22515662972857,2.58159273117352,3.1826188913945,3.57065461329021,3.70753930929818,6.14777062014145,6.64394068946325,6.37819074629948,4.42430949732493,6.21665934717224,3.90552458170081,4.52373851817817,8.15858525728064,1.96705709207614,1.65562047782839,33.5550733074485,34.5774475446999,7.70494243270374,4.54447668967871,2.2085575359138,7.02789739733949,4.73931475012158,5.4962823529087,4.45597348164788,6.79383673893198,4.04810701674894,4.9683495844923,7.90575555893047,32.1321316421807,2.83880170416537,3.20518086601059,6.02681749608232,3.62934270539578,1.32745138339963,3.15614827001476,1.51161778482376,2.82907619633847,2.06711325016541,4.61152721915891,2.32585463851399,4.72593848320757,7.12994756769443,4.10847785316561,1.05418608574999,1.03135543248187,22.46901397975,8.10274923140896,2.8458910432206,7.71613326113732,7.09360934569094,5.88617098086833,8.88564711251453,9.43841342255258,1.87737366450968,3.60114520468494,2.42581237860458,2.4732937941222,3.55221738730992,3.19658502119226,3.34242563208782,3.61109979439135,0.874442509889552,33.7474049659128,9.22702756308404,4.54051109519089,5.18544676635193,15.0694765603753,10.935538217682,11.8964650067392,11.728511669576,10.4963589242744,7.46279858543889,0.954670618015114,4.74503990371703,3.25311147402958,3.88819226958485,4.18176592028937,4.36725127492355,4.98998081623837,7.10819719237889,8.63794608547298,1.16653475962614,0.621339313086926,2.25477175473676,3.43888055901151,4.30192075188454,6.61134040369762,7.36210993823067,7.43406952159424,6.33729088687071,6.11960608766566,6.60613869881978,4.1069300540421,3.45636007509439,2.52808896502543,2.22997736819181,2.46506297195585,3.50786222040047,2.8644271306797,3.17890167650024,4.80781798079875,2.95379054349154,2.52416124870369,3.96275394605999,3.02478555410522,3.31356794515158,4.61816839873581,4.9088298916259,3.17422537061296,0.887943813496259,1.97370484540847,1.34307693091263,3.09103350451505,3.19060208267009,2.56412273974171,1.92931541171159,3.00943262421218,30.4965995013216,26.2385384809091,27.498984645091,21.8253541576483,26.0331357512844,34.7481192799262,33.7511250115903,28.8205570063501,32.1731110378785,33.1366599521165,2.07574695168353,2.79317411380722,6.4878770186571,6.56388136084394,3.14419743941973,3.67687016900028,3.33370091702423,4.94484137373346,6.4183841918363,6.57012750585873,6.33698249725599,4.14977951049368,4.02658482120494,5.05798703998467,5.85841783347255,3.81034953026459,5.09891034157364,5.01563973205633,2.47251540481984,4.41596760403192,4.80016953339582,6.21165321557681,5.48403236878838,6.1045494985578,6.02300034658116,6.43071019976741,5.85369513192872,4.73525480588117,6.11118512306378,5.05028044491965,3.91495559809775,5.81176446015824,3.6830793885272,4.64810523557898,5.01557188550968,6.49507502638659,3.97683734357194,7.09074478359384,3.82576664137687,5.51478547798789,6.72416723299222 | |phase1_expression=7.8472935081349,0,0.454999239389536,0.90739263392049,0,1.34303417529512,0.700837921786577,4.9066862907799,1.97104211012333,2.34064526321993,1.36974374580404,0.558405112967355,4.28001824828014,5.68232615723483,12.6581709489952,13.7683181825082,12.5921138063066,3.15462165358238,3.01651753932625,2.12194825899015,7.48380953329414,4.66667470644161,1.30599894569468,0.319984845586813,0.68822784320151,0,0.430761996159075,0.430942465371778,0.570070258369122,1.26015064879965,0.665191531965914,2.54012269383853,2.46025915033828,0,1.1554064790051,1.49611180822643,1.83752420636132,25.9489611056883,25.7840663692854,28.2702821745851,38.2350467220159,25.2726829434625,26.2175590636823,5.41356317294982,5.17022349219524,4.77221555620372,3.9119567217402,2.18025156380447,3.29529274101708,5.44403717407994,2.79972843250725,1.43752564364972,2.34895648480831,5.07753499407941,2.01656279485478,2.57259436035947,3.43840127926508,2.06268836910977,13.7575193384526,15.869729378161,6.97214543856797,1.35537812827653,0,0.899899717281399,2.96659908770092,3.5524005747305,1.79760066311043,1.92109152660777,5.91030790158323,4.05017814995072,5.04779907243317,18.5673139862472,17.0068776532742,6.00204916153275,5.36734637702124,6.43453150627015,37.4393995397922,41.1153228634304,33.7934373163736,17.9365351313064,16.4677758484337,18.7528813400434,28.1974828991395,41.0816705323126,40.0331409175242,19.1508580557884,21.4981238006645,14.1663578827228,1.8931548333296,5.06329452715463,7.53647670624362,2.58127163094416,3.39985666853875,3.77792234146472,4.54843492213368,4.48026887097336,4.63466586434781,3.06774580640504,2.33807404142582,0.70667914902068,5.7745802108439,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,1.01104889002957,5.1382745873577,2.84831672011889,6.97678053604676,5.20455980298408,5.1759131313064,5.07354093963329,4.06951129492081,5.52666923537813,5.6549966098354,2.22475470960936,8.09756398751505,6.19227386364912,6.30890714794896,4.63767188766826,7.75800405016355,1.86391761218122,22.2513405728776,23.6674778699204,0.766371165625774,9.10594946244994,3.59941638596045,8.76784566804146,41.7915883939455,40.2600530480391,23.120400788767,37.8937018019163,46.0287823194595,31.7915708176127,44.2918648174978,7.73979165262404,6.46916247172484,4.29628689337247,6.31325567659422,4.16385417480652,5.0578462975364,5.40186389416048,7.08312643827861,8.50456239391598,9.09607414022434,8.90166383317424,10.0894314588216,2.58681591519411,2.83659120251729,4.39877810409872,1.7535658594206,2.50242524303038,4.52727816478817,3.2925141825271,4.37875387000685,15.4486901208912,12.610047448621,15.344828967362,6.62802472113606,9.38104239924385,9.18316513451176,9.70653415899362,10.4285042826124,9.56456099901745,8.8362899005155,10.1943892531855,8.29033930806903,10.8609500942897,13.4617320544858,9.40398190731926,9.0643992203706,10.0993053033883,7.64976586934119,40.1653801757483,14.6124549578584,0,0,4.90562976231038,3.71578674976702,3.73715637834071,2.21851877085677,3.55804870151792,2.28270751335071,2.37264530772256,3.12928013975621,3.2673577144035,6.76452004939913,3.70431765526328,5.39291645192533,1.51296634912286,1.99141273254367,2.0863469104839,4.91268604221834,0,2.64746726198909,3.68509725618489,5.75113723100612,5.94423448968019,5.60918562322488,6.27994911365499,4.81248939295022,1.48226313543574,4.83850806576673,3.34150291692445,7.19558759631532,6.28866376304359,5.06472035480075,5.85639459097266,2.5892652370573,8.2688965655268,6.31491250332587,8.62609239164127,7.07067800570156,3.74445207737473,5.30415643688935,2.15276896226295,3.85954817090694,4.43407656399851,5.49525094134406,4.23708938749267,3.22515662972857,2.58159273117352,3.1826188913945,3.57065461329021,3.70753930929818,6.14777062014145,6.64394068946325,6.37819074629948,4.42430949732493,6.21665934717224,3.90552458170081,4.52373851817817,8.15858525728064,1.96705709207614,1.65562047782839,33.5550733074485,34.5774475446999,7.70494243270374,4.54447668967871,2.2085575359138,7.02789739733949,4.73931475012158,5.4962823529087,4.45597348164788,6.79383673893198,4.04810701674894,4.9683495844923,7.90575555893047,32.1321316421807,2.83880170416537,3.20518086601059,6.02681749608232,3.62934270539578,1.32745138339963,3.15614827001476,1.51161778482376,2.82907619633847,2.06711325016541,4.61152721915891,2.32585463851399,4.72593848320757,7.12994756769443,4.10847785316561,1.05418608574999,1.03135543248187,22.46901397975,8.10274923140896,2.8458910432206,7.71613326113732,7.09360934569094,5.88617098086833,8.88564711251453,9.43841342255258,1.87737366450968,3.60114520468494,2.42581237860458,2.4732937941222,3.55221738730992,3.19658502119226,3.34242563208782,3.61109979439135,0.874442509889552,33.7474049659128,9.22702756308404,4.54051109519089,5.18544676635193,15.0694765603753,10.935538217682,11.8964650067392,11.728511669576,10.4963589242744,7.46279858543889,0.954670618015114,4.74503990371703,3.25311147402958,3.88819226958485,4.18176592028937,4.36725127492355,4.98998081623837,7.10819719237889,8.63794608547298,1.16653475962614,0.621339313086926,2.25477175473676,3.43888055901151,4.30192075188454,6.61134040369762,7.36210993823067,7.43406952159424,6.33729088687071,6.11960608766566,6.60613869881978,4.1069300540421,3.45636007509439,2.52808896502543,2.22997736819181,2.46506297195585,3.50786222040047,2.8644271306797,3.17890167650024,4.80781798079875,2.95379054349154,2.52416124870369,3.96275394605999,3.02478555410522,3.31356794515158,4.61816839873581,4.9088298916259,3.17422537061296,0.887943813496259,1.97370484540847,1.34307693091263,3.09103350451505,3.19060208267009,2.56412273974171,1.92931541171159,3.00943262421218,30.4965995013216,26.2385384809091,27.498984645091,21.8253541576483,26.0331357512844,34.7481192799262,33.7511250115903,28.8205570063501,32.1731110378785,33.1366599521165,2.07574695168353,2.79317411380722,6.4878770186571,6.56388136084394,3.14419743941973,3.67687016900028,3.33370091702423,4.94484137373346,6.4183841918363,6.57012750585873,6.33698249725599,4.14977951049368,4.02658482120494,5.05798703998467,5.85841783347255,3.81034953026459,5.09891034157364,5.01563973205633,2.47251540481984,4.41596760403192,4.80016953339582,6.21165321557681,5.48403236878838,6.1045494985578,6.02300034658116,6.43071019976741,5.85369513192872,4.73525480588117,6.11118512306378,5.05028044491965,3.91495559809775,5.81176446015824,3.6830793885272,4.64810523557898,5.01557188550968,6.49507502638659,3.97683734357194,7.09074478359384,3.82576664137687,5.51478547798789,6.72416723299222 | ||
|short_description=p3@Tmx4 | |short_description=p3@Tmx4 | ||
}} | }} |
Latest revision as of 19:08, 25 September 2015
Short description: | p3@Tmx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000110119_5end |
EntrezGene: | Tmx4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.52e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-08 | 23 |
neuron | 1.60e-07 | 33 |
neuronal stem cell | 1.60e-07 | 33 |
neuroblast | 1.60e-07 | 33 |
electrically signaling cell | 1.60e-07 | 33 |