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FFCP PHASE1:Mm9::chr16:90220814..90220834,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20655
|EntrezGene=20655
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=P08228
|UniProt=P08228
|association_with_transcript=-152bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end
|association_with_transcript=-152bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end
|cluster_id=chr16:90220814..90220834,+
|description=CAGE_peak_3_at_Sod1_5end
|description=CAGE_peak_3_at_Sod1_5end
|id=chr16:90220814..90220834,+
|id=chr16:90220814..90220834,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!1.29e-09!49;UBERON:0003080!1.29e-09!40;UBERON:0001049!1.48e-09!52;UBERON:0005068!1.48e-09!52;UBERON:0006241!1.48e-09!52;UBERON:0007135!1.48e-09!52;UBERON:0000033!1.87e-09!63;UBERON:0000955!2.12e-09!50;UBERON:0006238!2.12e-09!50;UBERON:0002616!3.11e-09!49;UBERON:0002780!4.19e-09!39;UBERON:0001890!4.19e-09!39;UBERON:0006240!4.19e-09!39;UBERON:0002021!1.17e-08!10;UBERON:0000411!1.17e-08!10;UBERON:0001950!1.17e-08!10;UBERON:0002346!1.53e-08!71;UBERON:0003075!1.53e-08!71;UBERON:0007284!1.53e-08!71;UBERON:0002619!7.37e-08!17;UBERON:0002791!1.08e-07!29;UBERON:0003528!1.08e-07!29;UBERON:0001893!1.08e-07!29;UBERON:0007811!2.51e-07!86;UBERON:0000956!3.22e-07!21;UBERON:0001869!3.22e-07!21;UBERON:0000203!3.22e-07!21;UBERON:0002020!8.30e-07!34;UBERON:0000153!9.66e-07!94
|ontology_enrichment_uberon=UBERON:0003056!1.29e-09!49;UBERON:0003080!1.29e-09!40;UBERON:0001049!1.48e-09!52;UBERON:0005068!1.48e-09!52;UBERON:0006241!1.48e-09!52;UBERON:0007135!1.48e-09!52;UBERON:0000033!1.87e-09!63;UBERON:0000955!2.12e-09!50;UBERON:0006238!2.12e-09!50;UBERON:0002616!3.11e-09!49;UBERON:0002780!4.19e-09!39;UBERON:0001890!4.19e-09!39;UBERON:0006240!4.19e-09!39;UBERON:0002021!1.17e-08!10;UBERON:0000411!1.17e-08!10;UBERON:0001950!1.17e-08!10;UBERON:0002346!1.53e-08!71;UBERON:0003075!1.53e-08!71;UBERON:0007284!1.53e-08!71;UBERON:0002619!7.37e-08!17;UBERON:0002791!1.08e-07!29;UBERON:0003528!1.08e-07!29;UBERON:0001893!1.08e-07!29;UBERON:0007811!2.51e-07!86;UBERON:0000956!3.22e-07!21;UBERON:0001869!3.22e-07!21;UBERON:0000203!3.22e-07!21;UBERON:0002020!8.30e-07!34;UBERON:0000153!9.66e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.40e-29,10;UBERON:0000411,5.40e-29,10;UBERON:0001950,5.40e-29,10;UBERON:0002619,2.63e-23,17;UBERON:0000956,1.34e-21,21;UBERON:0001869,1.34e-21,21;UBERON:0000203,1.34e-21,21;UBERON:0001049,8.50e-20,52;UBERON:0005068,8.50e-20,52;UBERON:0006241,8.50e-20,52;UBERON:0007135,8.50e-20,52;UBERON:0003528,8.81e-20,29;UBERON:0002791,8.81e-20,29;UBERON:0001893,8.81e-20,29;UBERON:0003080,1.38e-19,40;UBERON:0002020,1.23e-18,34;UBERON:0002616,1.46e-18,46;UBERON:0000955,4.44e-18,47;UBERON:0006238,4.44e-18,47;UBERON:0002780,5.83e-18,39;UBERON:0001890,5.83e-18,39;UBERON:0006240,5.83e-18,39;UBERON:0000073,5.97e-17,54;UBERON:0003056,2.91e-15,49;UBERON:0002346,3.11e-15,64;UBERON:0003075,3.11e-15,64;UBERON:0007284,3.11e-15,64;UBERON:0010371,8.51e-13,73;UBERON:0001017,8.51e-13,73;UBERON:0001016,2.46e-12,75;UBERON:0010314,3.18e-09,92;UBERON:0004121,8.60e-09,95;UBERON:0000924,8.60e-09,95;UBERON:0006601,8.60e-09,95
|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0.129123323441576,0.703943610758334,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,24.4924675635081,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0.219686182734472,0,0,0,0,0.725362142011344,0,0,0,0,0.606949382578793,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0.571301968807607,1.10434270475807,0.244981598429908,0,0.919218786610021,0,0.255374676170375,0.153606533256243,0.395658863190582,0.274462930807229,0,0.558365998002762,0,0.30559649555362,0,0,0,0,0,0.289864488701678,0,0,0,0,0,3.23022166303029,0,0,0,0.845060518660083,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,3.9964357901671,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0.255457055208591,0.599075622529601,0.599902730993408,0.254140454146129,1.19832511523858,1.37250180845588,1.38219787324151,2.78118912307642,5.11430914660661,1.66230435647648,1.29793010454206,0.203678727700633,0,0.758168275301024,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.340182495756639,0.2562274405697,0.187403449119458,0,0,0,0,1.31517439456545,0,0.696504333044333,0.411564272815887,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.730999937126662,0.219550115291051,0.671032093801859,3.36463917702604,2.77842453424068,0,0,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0,0,0.407302655690628,0,0.0701358198903186,0.316182685621286,0,0.156998727841375,0,0.889357881261447,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0.179397413521912,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0,0.975668239288994,0.157635144106191,0,0.637819074629948,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.275936746304732,1.9266070798535,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,2.10837217149998,0,0.680879211507576,0,0.388076051348264,0.214337035031592,0.354680467284547,0,0.493647061806363,0.913394847343798,0.23467170806371,0.21183207086382,0.441056796109924,0,0.322928853391811,0.180938774784468,0.358117032009409,0,0.582961673259701,2.03967832211561,0,0,0,0.188368457004691,0,0,0.679913719975421,0.559805809294632,0.829199842826543,0.954670618015114,0,0,0.216010681643603,0,0,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,198.419914416835,0,0.165458490457098,0,1.03327858782185,0.337912250981556,0.352071715937262,0.13020438484395,0.419437377702843,2.65742532908607,49.8291910826107,0.632022241256357,0.405450430580328,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0.295379054349154,0.403865799792591,0,0.201652370273681,0.0974578807397524,0,0.233753804363138,0,0,0,0,0.386379188064381,0.187682475451182,0,0.428736758158132,0,6.7770221114048,3.68260189205742,5.15605962095457,6.53042092906013,7.53590771747707,5.2877572817279,4.72515750162264,6.30449684513909,3.62513927187364,4.14208249401456,0,0.399024873401031,0.170733605754134,0,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0.463537303779422,0,0,0.294397840268795,0.685738504770831,1.06485483695602,0.715308569841963,0.145346416632329,0.470546902076653,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.999242311751784,0.467863216890817,0.429742108096597,0,0.220591419119515,0
|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0.129123323441576,0.703943610758334,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,24.4924675635081,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0.219686182734472,0,0,0,0,0.725362142011344,0,0,0,0,0.606949382578793,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0.571301968807607,1.10434270475807,0.244981598429908,0,0.919218786610021,0,0.255374676170375,0.153606533256243,0.395658863190582,0.274462930807229,0,0.558365998002762,0,0.30559649555362,0,0,0,0,0,0.289864488701678,0,0,0,0,0,3.23022166303029,0,0,0,0.845060518660083,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,3.9964357901671,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0.255457055208591,0.599075622529601,0.599902730993408,0.254140454146129,1.19832511523858,1.37250180845588,1.38219787324151,2.78118912307642,5.11430914660661,1.66230435647648,1.29793010454206,0.203678727700633,0,0.758168275301024,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.340182495756639,0.2562274405697,0.187403449119458,0,0,0,0,1.31517439456545,0,0.696504333044333,0.411564272815887,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.730999937126662,0.219550115291051,0.671032093801859,3.36463917702604,2.77842453424068,0,0,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0,0,0.407302655690628,0,0.0701358198903186,0.316182685621286,0,0.156998727841375,0,0.889357881261447,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0.179397413521912,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0,0.975668239288994,0.157635144106191,0,0.637819074629948,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.275936746304732,1.9266070798535,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,2.10837217149998,0,0.680879211507576,0,0.388076051348264,0.214337035031592,0.354680467284547,0,0.493647061806363,0.913394847343798,0.23467170806371,0.21183207086382,0.441056796109924,0,0.322928853391811,0.180938774784468,0.358117032009409,0,0.582961673259701,2.03967832211561,0,0,0,0.188368457004691,0,0,0.679913719975421,0.559805809294632,0.829199842826543,0.954670618015114,0,0,0.216010681643603,0,0,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,198.419914416835,0,0.165458490457098,0,1.03327858782185,0.337912250981556,0.352071715937262,0.13020438484395,0.419437377702843,2.65742532908607,49.8291910826107,0.632022241256357,0.405450430580328,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0.295379054349154,0.403865799792591,0,0.201652370273681,0.0974578807397524,0,0.233753804363138,0,0,0,0,0.386379188064381,0.187682475451182,0,0.428736758158132,0,6.7770221114048,3.68260189205742,5.15605962095457,6.53042092906013,7.53590771747707,5.2877572817279,4.72515750162264,6.30449684513909,3.62513927187364,4.14208249401456,0,0.399024873401031,0.170733605754134,0,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0.463537303779422,0,0,0.294397840268795,0.685738504770831,1.06485483695602,0.715308569841963,0.145346416632329,0.470546902076653,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.999242311751784,0.467863216890817,0.429742108096597,0,0.220591419119515,0
|short_description=p3@Sod1
|short_description=p3@Sod1
}}
}}

Latest revision as of 19:56, 25 September 2015

Short description:p3@Sod1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sod1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -152bp_to_ENSMUST00000023707, NM_011434, uc007zvz.1_5end
EntrezGene:Sod1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sod1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G5198.42
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E249.83
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe5.40e-2910
visual cortex5.40e-2910
neocortex5.40e-2910
regional part of cerebral cortex2.63e-2317
cerebral cortex1.34e-2121
cerebral hemisphere1.34e-2121
pallium1.34e-2121
neural tube8.50e-2052
neural rod8.50e-2052
future spinal cord8.50e-2052
neural keel8.50e-2052
brain grey matter8.81e-2029
regional part of telencephalon8.81e-2029
telencephalon8.81e-2029
anterior neural tube1.38e-1940
gray matter1.23e-1834
regional part of brain1.46e-1846
brain4.44e-1847
future brain4.44e-1847
regional part of forebrain5.83e-1839
forebrain5.83e-1839
future forebrain5.83e-1839
regional part of nervous system5.97e-1754
pre-chordal neural plate2.91e-1549
neurectoderm3.11e-1564
neural plate3.11e-1564
presumptive neural plate3.11e-1564
ecto-epithelium8.51e-1373
central nervous system8.51e-1373
nervous system2.46e-1275
structure with developmental contribution from neural crest3.18e-0992
ectoderm-derived structure8.60e-0995
ectoderm8.60e-0995
presumptive ectoderm8.60e-0995
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