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FFCP PHASE1:Mm9::chr16:90220953..90220970,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:90220953..90220970,+
|DHSsupport=NA
|short_description=p2@Sod1
|DPIdataset=NA
|description=CAGE_peak_2_at_Sod1_5end
|association_with_transcript=-16bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end
|EntrezGene=20655
|EntrezGene=20655
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=P08228
|UniProt=P08228
|association_with_transcript=-16bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end
|cluster_id=chr16:90220953..90220970,+
|description=CAGE_peak_2_at_Sod1_5end
|id=chr16:90220953..90220970,+
|ontology_enrichment_celltype=CL:0000117!1.65e-10!23;CL:0000337!1.65e-10!23;CL:0000393!6.30e-07!39;CL:0000211!6.30e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-10,23;CL:0000337,1.43e-10,23;CL:0000393,5.95e-07,39;CL:0000211,5.95e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.41e-20!52;UBERON:0005068!6.41e-20!52;UBERON:0006241!6.41e-20!52;UBERON:0007135!6.41e-20!52;UBERON:0000955!2.07e-18!50;UBERON:0006238!2.07e-18!50;UBERON:0002616!6.73e-18!49;UBERON:0000033!1.13e-17!63;UBERON:0000073!1.34e-17!75;UBERON:0001016!1.34e-17!75;UBERON:0001017!2.31e-17!73;UBERON:0005743!2.31e-17!73;UBERON:0002020!3.51e-17!34;UBERON:0002346!6.34e-17!71;UBERON:0003075!6.34e-17!71;UBERON:0007284!6.34e-17!71;UBERON:0004121!1.54e-16!102;UBERON:0000924!1.54e-16!102;UBERON:0006601!1.54e-16!102;UBERON:0003080!4.78e-15!40;UBERON:0002780!2.18e-14!39;UBERON:0001890!2.18e-14!39;UBERON:0006240!2.18e-14!39;UBERON:0002791!2.99e-14!29;UBERON:0003528!2.99e-14!29;UBERON:0001893!2.99e-14!29;UBERON:0003056!1.89e-13!49;UBERON:0000956!1.39e-10!21;UBERON:0001869!1.39e-10!21;UBERON:0000203!1.39e-10!21;UBERON:0000025!2.63e-09!114;UBERON:0004111!4.27e-09!122;UBERON:0002619!1.53e-08!17;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.83e-21,54;UBERON:0001049,6.87e-20,52;UBERON:0005068,6.87e-20,52;UBERON:0006241,6.87e-20,52;UBERON:0007135,6.87e-20,52;UBERON:0001016,1.45e-17,75;UBERON:0001017,2.50e-17,73;UBERON:0002020,2.73e-17,34;UBERON:0010314,4.05e-17,92;UBERON:0000955,9.32e-17,47;UBERON:0006238,9.32e-17,47;UBERON:0002346,1.40e-16,64;UBERON:0003075,1.40e-16,64;UBERON:0007284,1.40e-16,64;UBERON:0002616,2.98e-16,46;UBERON:0010371,5.91e-16,73;UBERON:0004121,8.76e-16,95;UBERON:0000924,8.76e-16,95;UBERON:0006601,8.76e-16,95;UBERON:0003080,4.08e-15,40;UBERON:0002780,1.88e-14,39;UBERON:0001890,1.88e-14,39;UBERON:0006240,1.88e-14,39;UBERON:0003528,2.44e-14,29;UBERON:0002791,2.44e-14,29;UBERON:0001893,2.44e-14,29;UBERON:0003056,1.64e-13,49;UBERON:0000956,1.20e-10,21;UBERON:0001869,1.20e-10,21;UBERON:0000203,1.20e-10,21;UBERON:0000025,2.48e-09,114;UBERON:0004111,4.71e-09,122;UBERON:0002619,1.37e-08,17;UBERON:0002021,1.42e-07,10;UBERON:0000411,1.42e-07,10;UBERON:0001950,1.42e-07,10
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|phase1_expression=4.96461426024861,1.39590163055744,1.81999695755814,1.81478526784098,1.50268718983904,0.503637815735669,0.233612640595526,0.258246646883153,0,0.468129052643987,0.171217968225505,0.398860794976682,0.342401459862411,0.524522414513984,0,2.02475267389826,1.39912375625629,0.473193248037357,0.548457734422955,0,5.10259740906419,0.695036658406197,0.522399578277871,0.95995453676044,1.14704640533585,1.14846392823004,1.29228598847722,0.646413698057667,0.760093677825496,1.51218077855958,2.66076612786366,0.635030673459631,1.23012957516914,0,1.44425809875637,1.82858109894342,0.612508068787107,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0,2.7697299954627,3.54819259268301,2.56965453026354,0.782391344348039,2.18025156380447,2.41654801007919,3.88859798148567,1.95980990275508,1.43752564364972,0.671130424230945,0,0.672187598284928,4.3734104126111,3.15186783932632,3.6097046459421,4.85559506063035,5.81890077199236,3.1691570175309,1.35537812827653,2.66788438833342,1.7997994345628,2.96659908770092,0.7104801149461,2.39680088414724,2.30530983192933,5.28817022773236,7.42532660824299,6.94072372459561,11.1403883917483,8.39300455616131,3.91970557487853,2.97120960156533,1.83843757322004,4.40463523997555,10.5980490610706,7.68032666281217,4.61602007055678,2.92760459527711,5.2091337055676,16.1926139420801,9.00420176050688,6.26472815884921,8.83885756421003,8.11518580554887,6.15118171223492,2.65041676666144,2.87171928405785,5.2175607966302,0,3.39985666853875,1.61910957491345,1.94932925234301,0.448026887097336,2.94933282276679,3.74946709671727,2.59786004602869,3.88673531961374,2.67602497575693,1.28326477414318,0,0,1.94841936910093,1.77351905832569,3.0331466700887,2.2836775943812,0.258937883647172,2.9688427812965,1.73485326766136,4.56698217468212,2.7673859670727,3.76806601381556,1.05829836422134,3.14166478324189,0.741584903203122,2.02439099687876,0.884610551949874,3.558870698843,1.54589062922275,0,3.72783522436244,10.5401086924157,7.12118803165747,1.27728527604296,3.35482348616577,1.19980546198682,1.77898317902291,11.3840885947665,8.23501085073528,5.52879149296603,9.56033761057521,10.7400492078739,10.1816141834184,9.24775199486219,4.58277137326423,1.8661045591514,6.57079171927554,1.05220927943237,1.30120442962704,2.98872735763515,1.26043490863744,2.71268672104287,1.76894897793452,3.71529788826064,2.43624483855295,3.88055056108524,0.646703978798527,1.13463648100692,1.40760899331159,2.84954452155847,2.22437799380478,1.74126083261083,1.85203922767149,1.99034266818493,2.1066395619397,1.28673953557358,1.42081749697796,1.03562886267751,0.938104239924385,0.540186184383045,1.42046841351126,1.96764231747404,1.54267112887378,3.0229412817553,1.87791380979733,2.6856028744449,2.46839774870221,3.94001913789829,4.2155780963845,4.23979963533464,2.19550115291051,2.95254121272818,10.5144974282064,9.8788427884113,1.32167513193519,0.264450566663544,1.49301775374664,1.85789337488351,1.15980715189884,1.4117846723634,1.11189021922435,1.14135375667535,0.949058123089023,1.4822905925161,2.5133520880027,1.59165177632921,1.9496408711912,0.898819408654221,1.29682829924817,1.39398891278057,1.32767530667157,1.25673363870702,1.1270773567308,1.4255592949172,1.55161989734101,1.47285221769669,2.59269802209455,2.36176236767363,2.19798218977925,2.83813477020141,2.66807364378434,0.333690211432188,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,1.01850340712568,0,0.810676133875177,1.64736847912849,0,2.23284568601102,1.5601883655728,1.76805214562978,1.25578189465339,1.92977408545347,1.84753190166605,1.32643988239339,0.977789858652155,1.01847051465113,0.704070744865506,1.67506257441816,1.19021820443007,2.34160377429359,1.57635144106191,2.87904096543407,3.34855014180723,2.29408640602033,2.07221978239075,3.32692834737477,0,1.63171705145613,1.96705709207614,4.13905119457099,11.0779907091576,8.08760637486202,2.62295912602681,3.53459298086122,1.26203287766503,1.17131623288992,1.50796378412959,0.955875191810208,1.55959071857676,1.98153571552183,1.21443210502468,1.16902343164525,0,5.78378369559253,2.12910127812403,4.45164009168138,4.39794790254655,1.31976098378028,1.32745138339963,1.45668381692989,0.604647113929502,1.50884063804718,1.77181135728464,2.15204603560749,3.10113951801865,1.81766864738753,3.56497378384721,1.58018378967908,2.10837217149998,0,4.76615448055303,0.540183282093931,2.45781499187234,2.35770738534752,1.41872186913819,3.0322698992352,2.63278432963394,5.17590413494819,1.87737366450968,1.90648863777438,0.882113592219848,2.30840754118072,1.61464426695906,1.44751019827574,1.67121281604391,1.47726809770555,1.7488850197791,10.5692422145991,0.512612642393558,1.23832120777933,1.11116716421827,0.376736914009382,0.956859594047176,0.457556346413045,4.9293744698218,4.05859211738608,4.28419918793714,2.86401185404534,1.10717597753397,1.42323626988794,1.83609079397062,2.09088296014469,1.31017538247707,2.96701562046606,1.32245529160537,3.40282724579238,1.03691978633434,3.10669656543463,15.7834022831573,2.24274819065968,2.97825282822776,5.05573089694524,5.55387240954244,5.23763989021412,4.5769323071844,3.3853140059427,5.24296722128554,2.65742532908607,7.77681016896237,0.948033361884535,2.22997736819181,2.77319584345034,1.29920822977795,0.358053391334963,0.39736270956253,1.20195449519969,1.32920574457119,1.21159739937777,1.295515713135,0.604957110821043,0.682205165178267,0.288635524920988,0.584384510907845,2.72076460338254,1.55390167361845,1.70456327558004,1.00730769818447,1.9318959403219,1.50145980360946,3.6630324853453,1.2862102744744,1.00314420807073,8.471277639256,6.90487854760765,8.02053718815155,9.96748457593388,11.6464028361009,9.06472676867641,12.8254275044043,10.8077088773813,14.0474146785103,11.9084871702919,1.03787347584177,0.399024873401031,1.19513524027894,2.43106717068294,3.14419743941973,3.30918315210025,2.22246727801615,1.85431551515005,0.962757628775446,3.28506375292937,2.28131369901216,2.64076877940507,1.96647165686753,1.85672941974121,1.89537047553524,2.38146845641537,2.20180219295225,1.35036454324594,3.29668720642645,1.76638704161277,3.77156177623957,2.8396128985494,1.1921809497366,2.76158191601424,2.35273451038327,2.45382362885862,2.19513567447327,4.20911538300549,2.17286582153379,3.92799590160417,1.89816028998679,2.1670986122624,2.86461730218783,1.70430525304563,2.70069255373598,4.74640098082097,3.04111090979031,3.43793686477277,3.44318997723918,3.52946270591225,3.94175320554716
|short_description=p2@Sod1
}}
}}

Latest revision as of 19:57, 25 September 2015

Short description:p2@Sod1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sod1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -16bp_to_ENSMUST00000023707, NM_011434, uc007zvz.1_5end
EntrezGene:Sod1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sod1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G14.22
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G19.88
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D52.59
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A38.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G515.78
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I55.55
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.43e-1023
neuroblast (sensu Vertebrata)1.43e-1023
electrically responsive cell5.95e-0739
electrically active cell5.95e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.83e-2154
neural tube6.87e-2052
neural rod6.87e-2052
future spinal cord6.87e-2052
neural keel6.87e-2052
nervous system1.45e-1775
central nervous system2.50e-1773
gray matter2.73e-1734
structure with developmental contribution from neural crest4.05e-1792
brain9.32e-1747
future brain9.32e-1747
neurectoderm1.40e-1664
neural plate1.40e-1664
presumptive neural plate1.40e-1664
regional part of brain2.98e-1646
ecto-epithelium5.91e-1673
ectoderm-derived structure8.76e-1695
ectoderm8.76e-1695
presumptive ectoderm8.76e-1695
anterior neural tube4.08e-1540
regional part of forebrain1.88e-1439
forebrain1.88e-1439
future forebrain1.88e-1439
brain grey matter2.44e-1429
regional part of telencephalon2.44e-1429
telencephalon2.44e-1429
pre-chordal neural plate1.64e-1349
cerebral cortex1.20e-1021
cerebral hemisphere1.20e-1021
pallium1.20e-1021
tube2.48e-09114
anatomical conduit4.71e-09122
regional part of cerebral cortex1.37e-0817
occipital lobe1.42e-0710
visual cortex1.42e-0710
neocortex1.42e-0710
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