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FFCP PHASE1:Mm9::chr19:45635059..45635134,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=226162
|EntrezGene=226162
|HGNC=
|HGNC=
|MCL_coexpression_id=208
|TSSclassifier=NA
|UniProt=Q8BPA8
|UniProt=Q8BPA8
|association_with_transcript=0bp_to_ENSMUST00000047057,NM_172639,uc008hrd.1,uc008hre.1_5end
|association_with_transcript=0bp_to_ENSMUST00000047057,NM_172639,uc008hrd.1,uc008hre.1_5end
|cluster_id=chr19:45635059..45635134,+
|description=CAGE_peak_1_at_Dpcd_5end
|description=CAGE_peak_1_at_Dpcd_5end
|id=chr19:45635059..45635134,+
|id=chr19:45635059..45635134,+
|ontology_enrichment_celltype=CL:0000117!4.77e-07!23;CL:0000337!4.77e-07!23
|ontology_enrichment_celltype=CL:0000117!4.77e-07!23;CL:0000337!4.77e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-07,23;CL:0000337,4.77e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.67e-20!52;UBERON:0005068!3.67e-20!52;UBERON:0006241!3.67e-20!52;UBERON:0007135!3.67e-20!52;UBERON:0000955!3.40e-19!50;UBERON:0006238!3.40e-19!50;UBERON:0002616!8.39e-19!49;UBERON:0000033!1.80e-18!63;UBERON:0001017!2.13e-18!73;UBERON:0005743!2.13e-18!73;UBERON:0000073!9.37e-18!75;UBERON:0001016!9.37e-18!75;UBERON:0002346!9.45e-18!71;UBERON:0003075!9.45e-18!71;UBERON:0007284!9.45e-18!71;UBERON:0003080!5.58e-15!40;UBERON:0003056!1.00e-14!49;UBERON:0002780!1.99e-14!39;UBERON:0001890!1.99e-14!39;UBERON:0006240!1.99e-14!39;UBERON:0004121!7.32e-14!102;UBERON:0000924!7.32e-14!102;UBERON:0006601!7.32e-14!102;UBERON:0002020!1.35e-12!34;UBERON:0002791!4.40e-10!29;UBERON:0003528!4.40e-10!29;UBERON:0001893!4.40e-10!29;UBERON:0007811!2.99e-08!86;UBERON:0002619!8.53e-08!17;UBERON:0000025!4.88e-07!114;UBERON:0002021!7.19e-07!10;UBERON:0000411!7.19e-07!10;UBERON:0001950!7.19e-07!10;UBERON:0004111!9.14e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-21,54;UBERON:0001049,3.67e-20,52;UBERON:0005068,3.67e-20,52;UBERON:0006241,3.67e-20,52;UBERON:0007135,3.67e-20,52;UBERON:0001017,2.13e-18,73;UBERON:0002346,4.00e-18,64;UBERON:0003075,4.00e-18,64;UBERON:0007284,4.00e-18,64;UBERON:0001016,9.37e-18,75;UBERON:0000955,4.05e-17,47;UBERON:0006238,4.05e-17,47;UBERON:0002616,9.80e-17,46;UBERON:0010314,2.77e-15,92;UBERON:0003080,5.58e-15,40;UBERON:0010371,5.97e-15,73;UBERON:0003056,1.00e-14,49;UBERON:0002780,1.99e-14,39;UBERON:0001890,1.99e-14,39;UBERON:0006240,1.99e-14,39;UBERON:0004121,1.03e-13,95;UBERON:0000924,1.03e-13,95;UBERON:0006601,1.03e-13,95;UBERON:0002020,1.35e-12,34;UBERON:0003528,4.40e-10,29;UBERON:0002791,4.40e-10,29;UBERON:0001893,4.40e-10,29;UBERON:0002619,8.53e-08,17;UBERON:0000025,4.88e-07,114;UBERON:0002021,7.19e-07,10;UBERON:0000411,7.19e-07,10;UBERON:0001950,7.19e-07,10;UBERON:0004111,9.14e-07,122
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|phase1_expression=24.8230713012431,9.42233600626275,14.5599756604652,14.215817931421,11.520601788766,9.40123922706583,14.4839837169226,4.64843964389675,0.703943610758334,1.63845168425395,2.39705155515707,3.74929147278081,3.42401459862411,3.4968160967599,5.99597571268193,5.66930748691513,6.29605690315332,7.88655413395594,8.36398044995006,11.0341309467488,32.911753288464,18.4681169233647,23.2467812333652,17.4391740844813,12.8469197397615,14.9300310669905,16.7997178502039,15.9448712187558,17.1021077510736,12.8535366177565,13.9690221712842,10.7955214488137,14.7615549020297,0,14.1537293678125,17.2884031172832,14.2918549383658,15.4856703372656,14.8453715459522,10.9939986234498,5.88231488031014,6.14740936462601,12.1377588257788,17.7514513345564,16.4230628575614,21.6585167550784,12.5182615095686,27.2531445475558,36.6875925166568,43.941157190788,24.3576373628131,43.1257693094915,6.71130424230945,3.62681071005672,2.35265659399725,11.8339340576536,15.4728057566929,11.8604581223812,18.613114399083,17.9856932952491,27.2547503507657,23.7191172448392,18.6751907183339,14.8483453351431,19.7773272513395,16.3410426437603,14.9800055259202,31.1216827310459,9.7468235569969,11.7455166348571,11.1472229516232,40.2767888009363,45.719787976984,11.3916443269907,15.1435844208813,16.5459381589804,83.6880695595354,80.4430229936683,77.2640862278905,20.44237459818,29.7334841707831,30.7338888628488,92.1303896704557,82.1633410646253,66.4672377829124,34.7661730858928,37.1590086885659,29.2647129945722,9.39004797331482,14.81202578093,14.7830889237856,17.2084775396277,12.9194553404473,13.4925797909454,5.84798775702902,10.7526452903361,15.4488862144927,20.792499354523,34.8113246167844,33.213920003972,23.380007682929,34.6481489018658,38.2207859559969,49.7746692207332,26.8448890853906,30.909903587962,29.8259422558722,17.8126852361734,5.69663344023778,11.4300447079915,14.9197381018877,17.354532263792,14.5287763271317,19.2924979907357,11.170927177892,15.0799909595611,6.67426412882809,7.08536848907567,8.84610551949874,8.7354098971601,8.39197770149496,10.6672555689749,7.45567044872489,17.2740670236813,19.6879904404648,9.19645398750929,14.1381846916986,21.5964983157627,14.4860058863294,39.2451475240635,37.972550033946,17.8429180000267,42.0654854865309,41.1701886301832,50.076918738854,51.4304803924792,10.6931332042832,9.95255764880744,18.4487613656583,11.5743020737561,18.9975846725547,16.3230494147766,13.1445354757905,17.4817588689429,14.0835553243249,13.4519406299092,15.8355914505942,26.1290404446406,14.2274875335676,11.7245769704048,13.0203831881322,11.3981780862339,12.7901734643775,9.75106066262066,8.64284972913362,14.52950147775,21.7686088067103,24.4480511758979,19.0389544595047,9.73491130916859,16.6513502586578,14.7650890398032,9.46978942340841,16.1346670032871,17.2779166433864,18.835249524783,13.9502168727802,13.8950757416932,9.87359099480883,12.6408947340903,11.8360461936949,8.62579925809461,14.2707574939183,13.4206418760372,38.9036404843635,19.0373532901676,10.2429822724977,8.46241813323342,14.2903127858607,13.7019636397659,9.40732467651281,7.66397393568702,7.11609740303585,11.4135375667535,14.2358718463353,8.89374355509659,11.8127548136127,9.54991065797524,14.2323783596958,15.2799299471218,14.0489732418551,11.1519113022446,14.4147604724342,18.3940105301663,12.3978509240388,19.5505274731502,21.5287260756065,14.3778430775153,13.2164362589698,18.7464887934095,24.9627977267786,21.5945036863151,9.48648406678877,8.67594549723689,8.05891879964132,9.44420872016386,6.08580364165509,5.788251834058,5.34714288740982,6.32931502391783,6.16113861745134,8.23684239564244,4.31304619582064,8.93138274404408,11.5453939052387,8.84026072814891,8.61107584905178,11.0962009913574,19.2143317773269,16.2962614122617,14.0149879740142,16.2955282344181,20.1833613528112,12.730475565578,13.8065311713888,11.9031525193257,11.6650006638581,12.1805579306826,8.6105575075043,17.6972379892997,18.9953480052485,15.0435020924772,19.6028669121054,13.5976420954677,13.277635371514,13.5209005689319,63.0963818652022,56.9648796838107,15.0820149746541,14.1383719234449,12.304820557234,11.7131623288992,7.10897212518236,9.31978312014953,8.24355094104858,8.77537245445381,7.2865926301481,9.05993159525067,7.11518000303742,24.0990987316355,14.9037089468682,14.0671826897132,8.30723492703238,16.6619824202261,10.619611067197,15.7807413500738,16.0231485191318,15.8428266994954,9.7449624650655,11.0676653259814,12.9214146584111,10.1789444253702,15.6858846489277,13.9056173491759,12.6502330289999,10.3135543248187,28.5969268833182,20.887086907632,26.3891714916819,25.2917701337279,26.4236948126988,23.9014215586775,25.6696472139309,32.5777495552621,8.68285319835728,7.20229040936989,12.3495902910779,8.90385765883992,6.94297034792394,7.90099316558842,9.78853220825719,9.35603128546849,12.5336759750836,65.2697063076994,8.88528580148834,14.4470807574256,12.0376442790313,9.60679130723924,6.01454601972511,8.46479240864134,9.00885678967433,7.97723278244851,8.29199842826543,17.184071124272,12.1789357528737,13.8257237646257,13.608672943547,14.6361807210128,13.7568415160092,12.4075198674035,10.083721598491,15.9671124610258,14.9057219285562,9.32008969630389,98.6462642697333,11.2137409532984,11.2511773510826,13.6115831840833,15.7574984642832,16.5577002980963,10.6795087167636,8.85389816938861,10.9053718202739,62.5702872939356,80.9364317584602,4.74016680942267,19.2588954525656,17.6662846323503,12.2125573599127,11.9947886097213,9.53670502950071,9.37524506255757,8.56599257612548,6.86571859647404,4.41999478598999,3.93222122033678,5.06780979846713,5.58028681513911,4.67507608726276,11.3365191807606,14.6510729226883,24.133027427949,18.4673078000486,16.227925898704,11.0732660516197,12.0880072016395,10.0753138167161,11.034586288778,38.4031252979605,38.6673198666029,29.2176711854092,40.2136446684229,48.6408589037156,64.2084812781245,45.226507515531,38.727623477283,48.4862377613099,41.4208249401456,20.7574695168353,15.1629451892392,9.56108192223151,13.1277627216879,11.947950269795,12.3175150661509,12.2235700290888,10.3017528619447,10.9112531261217,11.8767689528985,10.1391719956096,11.1289541417785,14.9826411951812,11.4605022804716,12.0614484806788,10.0021675169445,12.1678542242098,14.2752823143142,11.9504911232959,13.3951017322302,13.0290315906458,11.7134032065163,15.2599161566285,15.4067201630268,14.3046258231303,14.384483341585,9.87811053512972,13.6796249947678,13.3088031568945,7.2948495315506,10.7957866492998,12.1160513321943,15.1415485972785,12.7048209772492,9.83823716003821,13.2399606307111,8.65546951248011,7.52048689169044,9.94699326757986,7.72069966918304,10.434052602919
|short_description=p1@Dpcd
|short_description=p1@Dpcd
}}
}}

Latest revision as of 20:37, 25 September 2015

Short description:p1@Dpcd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dpcd_5end
Coexpression cluster:MCL_coexpression_mm9:208
Association with transcript: 0bp_to_ENSMUST00000047057, NM_172639, uc008hrd.1, uc008hre.1_5end
EntrezGene:Dpcd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dpcd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.85
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I116.80
GP2+ M cell, pool3.CNhs13240.11847-124I215.94
Ileum epithelium, pool1.CNhs13199.10252-104B917.10
Ileum epithelium, pool2.CNhs13232.10253-104C112.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.75
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C227.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B836.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C343.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C443.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C318.61
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.72
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C814.98
Mouse Microglia, donor2.CNhs12634.11736-123E831.12
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F140.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D545.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.14
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D383.69
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F380.44
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D777.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E492.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E582.16
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I666.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.16
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.26
Mouse Schwann, donor1.CNhs12507.11728-123D99.39
Mouse Schwann, donor2.CNhs12573.11746-123F914.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E334.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H134.65
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I838.22
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G230.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.83
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.81
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D711.43
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I114.53
adrenal gland, embryo E18.CNhs11026.1262-18F519.29
adrenal gland, neonate N00.CNhs11191.1311-23C111.17
adrenal gland, neonate N25.CNhs11223.1377-27I315.08
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H17.09
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A68.39
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B217.27
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.14
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.49
corpora quadrigemina, adult.CNhs10501.16-22A439.25
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F117.84
cortex, adult.CNhs10473.12-14D542.07
cortex, neonate N30.CNhs11107.1392-42F241.17
diencephalon, adult.CNhs10482.20-12F250.08
diencephalon, neonate N30.CNhs11201.1388-42B251.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.69
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.95
epididymis, adult.CNhs10490.58-23B218.45
eyeball, adult.CNhs10484.31-12G411.57
eyeball, embryo E12.CNhs11016.345-16C619.00
eyeball, embryo E14.CNhs10521.399-16E216.32
eyeball, embryo E15.CNhs10593.426-16C913.14
eyeball, embryo E17.CNhs11023.1261-18D417.48
eyeball, neonate N00.CNhs11207.633-15C614.08
eyeball, neonate N01.CNhs11140.1532-43E713.45
eyeball, neonate N02.CNhs11205.1551-44G815.84
eyeball, neonate N16.CNhs11188.777-19A226.13
forelimb, embryo E11.CNhs10596.335-25E214.23
forelimb, embryo E12.CNhs10600.359-14H211.72
forelimb, embryo E13.CNhs10589.384-1E213.02
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I614.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D224.45
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.04
heart, embryo E11.CNhs10586.331-24E99.73
heart, embryo E12.CNhs11015.353-12F516.65
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C617.28
heart, embryo E17.CNhs11025.479-18E518.84
heart, embryo E18.CNhs11030.1283-20G313.95
heart, neonate N00.CNhs11213.639-21E313.90
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G112.64
heart, neonate N16.CNhs11209.782-15G111.84
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D314.27
heart, neonate N30.CNhs11202.1390-42D213.42
hippocampus, adult.CNhs10478.13-16E838.90
hippocampus, neonate N00.CNhs11228.627-43G119.04
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I514.29
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D89.41
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E98.89
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I914.41
kidney, embryo E15.CNhs10997.434-16F818.39
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I219.55
kidney, embryo E18.CNhs11001.1288-20C721.53
kidney, neonate N00.CNhs11214.646-21G714.38
kidney, neonate N10.CNhs11206.758-6D513.22
kidney, neonate N20.CNhs11113.832-19I118.75
kidney, neonate N25.CNhs11122.1353-25F324.96
kidney, neonate N30.CNhs11203.1385-42H121.59
liver, adult pregnant day01.CNhs10466.508-5B29.49
liver, embryo E12.CNhs10601.355-15F88.68
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H18.61
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G216.30
lung, embryo E14.CNhs10604.404-26F814.01
lung, embryo E15.CNhs11020.432-17C516.30
lung, embryo E16.CNhs10998.458-17B620.18
lung, embryo E17.CNhs10605.480-44A612.73
lung, embryo E18.CNhs10583.1287-20I613.81
lung, neonate N00.CNhs11224.640-42C611.90
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A312.18
lung, neonate N10.CNhs11219.750-23E68.61
lung, neonate N20.CNhs11109.822-18A417.70
lung, neonate N25.CNhs11119.1359-25C719.00
lung, neonate N30.CNhs11133.1394-42H215.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H213.52
medulla oblongata, adult.CNhs10477.17-12C263.10
medulla oblongata, neonate N30.CNhs11200.1396-42A356.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I924.10
ovary, adult.CNhs10507.91-2I714.90
ovary, embryo E18.CNhs11040.505-44H714.07
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G616.66
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F415.78
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E515.84
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G828.60
pituitary gland, embryo E12.CNhs11018.346-16E620.89
pituitary gland, embryo E13.CNhs11009.370-44C726.39
pituitary gland, embryo E14.CNhs11037.398-44A525.29
pituitary gland, embryo E15.CNhs10592.427-16B926.42
pituitary gland, embryo E16.CNhs11036.449-43F623.90
pituitary gland, embryo E17.CNhs11039.1265-44F525.67
pituitary gland, neonate N00.CNhs11190.1308-22E932.58
placenta, adult pregnant day10.CNhs10472.539-13I78.68
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F812.35
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H37.90
skin, neonate N06.CNhs11097.693-20I59.79
skin, neonate N10.CNhs11108.762-6C49.36
small intestine, neonate N16.CNhs11114.790-21I112.53
spinal cord, adult.CNhs10505.24-13C965.27
spleen, adult.CNhs10465.25-2G28.89
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F212.04
spleen, neonate N10.CNhs11116.752-24D19.61
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D413.61
stomach, embryo E17.CNhs11006.1035-18D514.64
stomach, embryo E18.CNhs10999.1286-20C613.76
stomach, neonate N03.CNhs11193.1340-24B812.41
stomach, neonate N07.CNhs11210.718-18A910.08
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I114.91
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G598.65
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C511.25
testis, embryo E16.CNhs11033.470-26G513.61
testis, embryo E17.CNhs11029.486-18I515.76
testis, embryo E18.CNhs11027.503-18G516.56
testis, neonate N00.CNhs11189.1300-22B710.68
testis, neonate N07.CNhs11222.726-26I48.85
testis, neonate N10.CNhs11204.763-44D910.91
testis, neonate N20.CNhs11110.839-18H362.57
testis, neonate N30.CNhs11130.1391-42E280.94
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I419.26
thymus, embryo E15.CNhs11005.430-45I217.67
thymus, embryo E16.CNhs11002.456-26C512.21
thymus, embryo E17.CNhs10581.478-18C111.99
thymus, embryo E18.CNhs10595.1273-19G49.54
thymus, neonate N02.CNhs11181.1541-43F89.38
thymus, neonate N03.CNhs11137.2104-43C78.57
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G75.58
thymus, neonate N30.CNhs11132.1393-42G24.68
tongue, adult.CNhs10499.32-1B411.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F724.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.47
urinary bladder, adult.CNhs10481.879-12E416.23
uterus, adult pregnant day19.CNhs10497.590-15F511.07
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.22
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A448.64
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A564.21
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A848.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A941.42
whole body, embryo E11.CNhs11014.324-5I820.76
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H29.56
whole body, embryo E14.5.CNhs10578.420-27D213.13
whole body, embryo E14.CNhs10519.395-14B111.95
whole body, embryo E16.CNhs10514.453-14F212.32
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.30
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.70
whole body, embryo E17.5.CNhs10513.490-9F99.84
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C69.95
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B410.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.77e-0723
neuroblast (sensu Vertebrata)4.77e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.29e-2154
neural tube3.67e-2052
neural rod3.67e-2052
future spinal cord3.67e-2052
neural keel3.67e-2052
central nervous system2.13e-1873
neurectoderm4.00e-1864
neural plate4.00e-1864
presumptive neural plate4.00e-1864
nervous system9.37e-1875
brain4.05e-1747
future brain4.05e-1747
regional part of brain9.80e-1746
structure with developmental contribution from neural crest2.77e-1592
anterior neural tube5.58e-1540
ecto-epithelium5.97e-1573
pre-chordal neural plate1.00e-1449
regional part of forebrain1.99e-1439
forebrain1.99e-1439
future forebrain1.99e-1439
ectoderm-derived structure1.03e-1395
ectoderm1.03e-1395
presumptive ectoderm1.03e-1395
gray matter1.35e-1234
brain grey matter4.40e-1029
regional part of telencephalon4.40e-1029
telencephalon4.40e-1029
regional part of cerebral cortex8.53e-0817
tube4.88e-07114
occipital lobe7.19e-0710
visual cortex7.19e-0710
neocortex7.19e-0710
anatomical conduit9.14e-07122
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