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FFCP PHASE1:Mm9::chr19:46470212..46470246,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54130
|EntrezGene=54130
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=P61164,Q8R5C5
|UniProt=P61164,Q8R5C5
|association_with_transcript=0bp_to_ENSMUST00000040270,NM_016860,uc008htm.1,uc012bmz.1_5end
|association_with_transcript=0bp_to_ENSMUST00000040270,NM_016860,uc008htm.1,uc012bmz.1_5end
|cluster_id=chr19:46470212..46470246,-
|description=CAGE_peak_1_at_Actr1a_5end
|description=CAGE_peak_1_at_Actr1a_5end
|id=chr19:46470212..46470246,-
|id=chr19:46470212..46470246,-
|ontology_enrichment_celltype=CL:0000117!6.63e-14!23;CL:0000337!6.63e-14!23;CL:0000055!7.67e-13!50;CL:0002319!4.24e-12!43;CL:0000221!8.79e-12!44;CL:0000133!8.79e-12!44;CL:0000393!4.98e-09!39;CL:0000211!4.98e-09!39;CL:0000540!1.06e-07!33;CL:0000047!1.06e-07!33;CL:0000031!1.06e-07!33;CL:0000404!1.06e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.63e-14,23;CL:0000337,6.63e-14,23;CL:0002319,4.24e-12,43;CL:0000221,8.79e-12,44;CL:0000133,8.79e-12,44;CL:0000393,4.98e-09,39;CL:0000211,4.98e-09,39;CL:0000540,1.06e-07,33;CL:0000047,1.06e-07,33;CL:0000031,1.06e-07,33;CL:0000404,1.06e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.40e-21!75;UBERON:0001016!5.40e-21!75;UBERON:0004121!8.53e-20!102;UBERON:0000924!8.53e-20!102;UBERON:0006601!8.53e-20!102;UBERON:0001017!9.36e-20!73;UBERON:0005743!9.36e-20!73;UBERON:0001049!1.30e-19!52;UBERON:0005068!1.30e-19!52;UBERON:0006241!1.30e-19!52;UBERON:0007135!1.30e-19!52;UBERON:0000955!4.78e-18!50;UBERON:0006238!4.78e-18!50;UBERON:0002616!1.55e-17!49;UBERON:0000033!2.43e-17!63;UBERON:0002020!3.43e-17!34;UBERON:0002346!1.00e-15!71;UBERON:0003075!1.00e-15!71;UBERON:0007284!1.00e-15!71;UBERON:0002791!2.27e-14!29;UBERON:0003528!2.27e-14!29;UBERON:0001893!2.27e-14!29;UBERON:0003056!4.64e-14!49;UBERON:0003080!2.92e-13!40;UBERON:0002780!1.06e-12!39;UBERON:0001890!1.06e-12!39;UBERON:0006240!1.06e-12!39;UBERON:0007811!4.42e-11!86;UBERON:0000153!3.17e-10!94;UBERON:0000956!3.81e-10!21;UBERON:0001869!3.81e-10!21;UBERON:0000203!3.81e-10!21;UBERON:0002619!7.30e-08!17;UBERON:0003076!2.49e-07!12;UBERON:0003057!2.49e-07!12;UBERON:0000025!2.86e-07!114;UBERON:0004111!4.66e-07!122;UBERON:0000064!6.12e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.13e-22,95;UBERON:0000924,1.13e-22,95;UBERON:0006601,1.13e-22,95;UBERON:0001016,5.40e-21,75;UBERON:0000073,1.94e-20,54;UBERON:0001017,9.36e-20,73;UBERON:0001049,1.30e-19,52;UBERON:0005068,1.30e-19,52;UBERON:0006241,1.30e-19,52;UBERON:0007135,1.30e-19,52;UBERON:0002346,5.04e-19,64;UBERON:0003075,5.04e-19,64;UBERON:0007284,5.04e-19,64;UBERON:0010371,4.97e-18,73;UBERON:0002020,3.43e-17,34;UBERON:0000955,1.28e-16,47;UBERON:0006238,1.28e-16,47;UBERON:0002616,4.05e-16,46;UBERON:0010314,4.42e-16,92;UBERON:0003528,2.27e-14,29;UBERON:0002791,2.27e-14,29;UBERON:0001893,2.27e-14,29;UBERON:0003056,4.64e-14,49;UBERON:0003080,2.92e-13,40;UBERON:0002780,1.06e-12,39;UBERON:0001890,1.06e-12,39;UBERON:0006240,1.06e-12,39;UBERON:0000956,3.81e-10,21;UBERON:0001869,3.81e-10,21;UBERON:0000203,3.81e-10,21;UBERON:0002619,7.30e-08,17;UBERON:0003076,2.49e-07,12;UBERON:0003057,2.49e-07,12;UBERON:0000025,2.86e-07,114;UBERON:0000923,4.19e-07,291;UBERON:0010316,4.19e-07,291;UBERON:0005291,4.19e-07,291;UBERON:0006598,4.19e-07,291;UBERON:0010317,4.19e-07,291;UBERON:0002532,4.19e-07,291;UBERON:0004111,4.66e-07,122
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2764499,69.55543948924,79.2444641894836,76.208534747416,81.4580652164317,74.9666843428797,76.4327350593367,104.85851339306,62.7552706217795,498.868250735508,47.3967450959413,53.9394678890138,54.6407839246774,61.9967152693109,54.4038724080306,60.6736923798548,43.2278557681914,42.3631751479872,206.796007427061,271.324265894909,90.6951916202872,69.3320236292361,63.2699496135336,59.6336577468079,64.9866905272958,75.4989148168807,76.2039149956602,84.6260990710327,81.1770257583107,79.4074925345098,90.1386095123354,86.4451402161604,83.800514068727,93.7352755496183,102.935594161306,45.5071204416833,75.5390672651785,62.9567311365294,82.8783358398097,76.3867675086311,67.9492526031553,105.040505748742,68.2138061488094,100.525827985838,121.525862437895,127.182803983546,121.843906281675,97.2817178074312,83.093328712867,99.2283075340755,109.87837358671,111.01989020113,98.3744592328458,86.8700099279559,77.8098503132011,84.000934031034,71.4733748180785,85.3125571895888,59.7491402462546,70.2299659853104,70.4639895757018,74.4532566253011,67.2174583291701,77.5646657664134,69.0372409473039,69.7629230650624,72.1563467602877,71.5071588497385,73.8255221488764,60.0280808394351,67.7111363827605,64.2854005253158,55.4939928906678,73.0311507580935,59.6318708695374,61.9934093863034,65.9872731510771,65.2178006278241,69.299363863283,68.4150618544169,63.1367307450823,67.3588404675474,62.8479344256667,59.4361440802112,66.3920211211298,61.7938875186231,67.0876522335233,71.5683526740034,124.655478391035,82.1099945643384,84.2294531869329,88.5664977478745,81.3982336551012,67.9372758367835
|phase1_expression=53.4897149330012,96.3172125084637,80.9898646113374,64.122412797048,79.1415253315229,55.9037975466593,57.0014843053083,58.2346188721509,69.9719949093784,67.8787126333781,27.9085288207573,28.0797999663584,64.0290729942709,67.051448655371,47.6346959396398,58.7178275430495,49.6688933470984,63.8810884850431,61.427266255371,51.3511478675617,126.034156003885,56.297969330902,59.2923521345383,96.3154385216308,93.3695773943382,75.7986192631827,76.6756353163153,74.9839889746894,108.693395929046,72.3326472411001,89.3573957940878,55.2476685909879,46.1298590688428,47.5445043046316,43.3277429626912,44.3846503107175,37.7713309085383,106.725565837911,80.4775404859515,84.8108465237553,82.940639812373,90.8450494994733,90.3049256637946,128.66654797104,119.726155770247,120.590216170225,125.182615095686,139.100049770725,146.970056249362,137.461938645518,117.028648478803,107.814423273729,66.2741293928059,54.4021606508508,51.422351268797,89.0117648684377,87.106165741382,78.3821580261712,190.177473208022,194.139689392836,164.1623335081,145.703148789727,113.829733902226,113.837314236097,124.597161683439,101.598656437292,129.427247743951,108.733780406,149.83148978575,186.578206774396,159.426320704348,162.821061110168,155.491452829936,173.691953286805,204.821771565971,140.640474351333,131.037898389273,122.196782547525,118.430637140564,210.88617408058,250.035729965386,173.464152395401,128.982545538638,111.426996786273,108.028361178205,128.163434681045,126.9955392728,152.474746685096,141.683707726387,177.290880010519,56.2337108081255,58.5088236347343,30.5987100168488,53.4306159721439,52.6318898132612,51.9711189032909,74.8568759302237,115.381328385345,102.095899808927,88.3348936275851,69.5766493696802,38.4979432242953,12.7402619853323,7.11066703153331,71.6585345747119,73.2210011223035,62.1795067368183,75.0188089754224,55.6716449841419,70.9553424729862,69.0471600529221,70.3315254901046,62.2661842591358,61.9470052671279,62.0868373676521,58.1836317856397,118.159194577031,85.3136205827479,86.6918340910877,65.5155742287007,59.4063684658459,61.094281895038,87.6041277725174,108.621675691284,108.702840836183,95.030024537596,51.6403186620516,25.7958174327165,52.0987930999565,150.689383241252,120.780159144117,212.230200718628,141.840645276898,132.716322354442,141.295870300501,125.412496351377,68.6397312351132,70.0411244534824,72.0259861535973,73.6546495602659,75.5999773613309,77.7069112985138,96.8734258352779,80.4763727242718,89.5360328831475,105.821932955286,100.35454700347,115.381703349601,81.0535653427487,69.023719261254,64.0462091956774,74.745744757803,81.1897967738746,78.7049896340096,75.1104797888994,44.5836757673425,54.0704154231191,39.8889256027809,51.1494298912067,64.2089894860056,73.8757088940453,73.105196953172,71.4969101467335,71.622180356055,77.4420906694639,85.8050256129005,79.4089268142873,93.9961006055714,88.039519703712,99.977985624169,92.9048557395507,89.1819923294527,99.2366521115549,91.6629840133339,126.804838984169,207.1469847195,134.150025891422,100.226764765483,56.0948098907665,58.2914046369701,59.2790322081629,56.2697033699126,65.8239009780816,85.6015317506516,101.074690108981,97.5017811966144,99.0260722673062,78.7867629282957,94.7525463398924,95.2748573173475,99.4235029423593,106.938863737595,71.6944665602649,62.9509304479606,71.0058734740407,55.1895098460802,50.6215991507503,61.3688424040287,65.3233428493578,55.64902578831,66.8814580604257,66.1408798620851,64.3302200779113,51.2214474548409,54.6434006414704,58.2392871076771,55.3808131390613,57.88251834058,52.9621771705353,49.4837356415394,51.8832725680113,52.1666685057355,43.1304619582064,44.6569137202204,50.8621407176734,56.8302475381001,56.1513904323585,65.1298753840546,91.4528291324693,58.3633548253093,75.778714045542,69.4257400820519,63.6010572861841,62.1448215109136,68.0804812933999,75.711855368826,85.9111535378741,87.2570877216173,80.6841129406885,87.0114201140569,89.4508206065339,95.1790805466346,67.8560777726725,89.2005321462684,63.4375912194557,58.2226534702986,165.04600650745,142.412199209527,86.0658463227546,95.1815395560486,67.8342671744952,64.812831553242,68.2892170812973,58.3083867004227,60.1556420022464,57.7476122809218,70.4370620914316,64.2962887404886,84.591584480556,127.885883935879,65.7182594514284,66.7746013752207,61.4083836762982,63.3485272214536,55.7529581027844,54.8684237710258,54.1159166966904,51.3005816936043,62.3086993978431,51.9565400025237,72.3599220871019,49.4405872089407,53.4746067577082,53.7262488490887,47.4383738587494,33.0033738394198,74.5562736600796,63.5615661930525,78.520721056132,74.5892881909941,66.147907148568,69.9205765000117,72.4015690649332,91.3394847343798,73.9215880400688,92.3587828966256,75.420712134797,85.0813065178037,99.139157991286,98.1894417830377,117.820503531096,110.959248227661,99.3949652907791,164.472242883322,56.5582615440892,60.6777391811874,62.0401666688534,69.507960634731,65.6132293060921,70.2348991744024,43.8544349384147,48.703105408633,53.0687899408987,67.7816138790731,63.5835347098082,63.2323542764499,69.55543948924,79.2444641894836,76.208534747416,81.4580652164317,74.9666843428797,76.4327350593367,104.85851339306,62.7552706217795,498.868250735508,47.3967450959413,53.9394678890138,54.6407839246774,61.9967152693109,54.4038724080306,60.6736923798548,43.2278557681914,42.3631751479872,206.796007427061,271.324265894909,90.6951916202872,69.3320236292361,63.2699496135336,59.6336577468079,64.9866905272958,75.4989148168807,76.2039149956602,84.6260990710327,81.1770257583107,79.4074925345098,90.1386095123354,86.4451402161604,83.800514068727,93.7352755496183,102.935594161306,45.5071204416833,75.5390672651785,62.9567311365294,82.8783358398097,76.3867675086311,67.9492526031553,105.040505748742,68.2138061488094,100.525827985838,121.525862437895,127.182803983546,121.843906281675,97.2817178074312,83.093328712867,99.2283075340755,109.87837358671,111.01989020113,98.3744592328458,86.8700099279559,77.8098503132011,84.000934031034,71.4733748180785,85.3125571895888,59.7491402462546,70.2299659853104,70.4639895757018,74.4532566253011,67.2174583291701,77.5646657664134,69.0372409473039,69.7629230650624,72.1563467602877,71.5071588497385,73.8255221488764,60.0280808394351,67.7111363827605,64.2854005253158,55.4939928906678,73.0311507580935,59.6318708695374,61.9934093863034,65.9872731510771,65.2178006278241,69.299363863283,68.4150618544169,63.1367307450823,67.3588404675474,62.8479344256667,59.4361440802112,66.3920211211298,61.7938875186231,67.0876522335233,71.5683526740034,124.655478391035,82.1099945643384,84.2294531869329,88.5664977478745,81.3982336551012,67.9372758367835
|short_description=p1@Actr1a
|short_description=p1@Actr1a
}}
}}

Latest revision as of 21:15, 25 September 2015

Short description:p1@Actr1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Actr1a_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000040270, NM_016860, uc008htm.1, uc012bmz.1_5end
EntrezGene:Actr1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Actr1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G753.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I596.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I680.99
CD326+ enterocyte, pool1.CNhs13542.11848-124I364.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I479.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I755.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I857.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E958.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E769.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F267.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E464.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E867.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A147.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A358.72
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A549.67
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A263.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A461.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A651.35
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3126.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H256.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I959.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D196.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D293.37
GP2+ M cell, pool1.CNhs13228.11845-124H975.80
GP2+ M cell, pool2.CNhs13231.11846-124I176.68
GP2+ M cell, pool3.CNhs13240.11847-124I274.98
Ileum epithelium, pool1.CNhs13199.10252-104B9108.69
Ileum epithelium, pool2.CNhs13232.10253-104C172.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C889.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I355.25
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G646.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F543.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F644.38
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8106.73
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H180.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H384.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G982.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H290.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H490.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8128.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9119.73
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3120.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7125.18
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2139.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8146.97
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3137.46
Mouse Astrocytes, donor2.CNhs12078.11552-120C4117.03
Mouse Astrocytes, donor3.CNhs12107.11633-122C4107.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A266.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I954.40
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A151.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C189.01
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E187.11
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C578.38
Mouse Granule cells, donor1.CNhs12131.11713-123C3190.18
Mouse Granule cells, donor2.CNhs12357.11731-123E3194.14
Mouse Granule cells, donor3.CNhs12108.11636-122C7164.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6145.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1113.83
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7113.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7124.60
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2101.60
Mouse Microglia, donor1.CNhs12629.11718-123C8129.43
Mouse Microglia, donor2.CNhs12634.11736-123E8108.73
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5149.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5186.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9159.43
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1162.82
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5155.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2173.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2204.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6140.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3131.04
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3122.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7118.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4210.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4250.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8173.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4128.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5111.43
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6108.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6128.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6127.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1152.47
Mouse Schwann, donor1.CNhs12507.11728-123D9141.68
Mouse Schwann, donor2.CNhs12573.11746-123F9177.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G356.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F758.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C430.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C853.43
Mouse hepatocyte, donor6.CNhs13090.11822-124F452.63
Mouse hepatocyte, donor8.CNhs13091.11824-124F651.97
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A774.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7115.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3102.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I888.33
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G669.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H138.50
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G171.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G273.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G362.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B675.02
accessory axillary lymph node, adult.CNhs10475.1063-29H955.67
adrenal gland, adult.CNhs10508.49-24D770.96
adrenal gland, embryo E14.CNhs11038.406-44C569.05
adrenal gland, embryo E16.CNhs11004.1254-43D670.33
adrenal gland, embryo E17.CNhs11043.1263-45I162.27
adrenal gland, embryo E18.CNhs11026.1262-18F561.95
adrenal gland, neonate N00.CNhs11191.1311-23C162.09
adrenal gland, neonate N25.CNhs11223.1377-27I358.18
amnion, adult pregnant day17.5.CNhs10488.583-22A8118.16
aorta, adult.CNhs10498.46-23H185.31
bone (os femoris), adult.CNhs10483.56-12G286.69
bone (os femoris), neonate N02.CNhs11227.1985-43F565.52
bone (os femoris), neonate N16.CNhs11225.1525-43A659.41
bone (os femoris), neonate N20.CNhs11195.1350-25C361.09
cecum, adult.CNhs10467.37-13H487.60
cerebellum, adult.CNhs10494.15-8B2108.62
cerebellum, neonate N30.CNhs11135.1395-42I2108.70
colon, adult.CNhs10468.36-18H795.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C751.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D125.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D452.10
corpora quadrigemina, adult.CNhs10501.16-22A4150.69
corpus striatum, adult.CNhs10487.19-21D8120.78
corpus striatum, neonate N00.CNhs11226.630-43F1212.23
cortex, adult.CNhs10473.12-14D5141.84
cortex, neonate N30.CNhs11107.1392-42F2132.72
diencephalon, adult.CNhs10482.20-12F2141.30
diencephalon, neonate N30.CNhs11201.1388-42B2125.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B168.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A270.04
epididymis, adult.CNhs10490.58-23B272.03
eyeball, adult.CNhs10484.31-12G473.65
eyeball, embryo E12.CNhs11016.345-16C675.60
eyeball, embryo E14.CNhs10521.399-16E277.71
eyeball, embryo E15.CNhs10593.426-16C996.87
eyeball, embryo E17.CNhs11023.1261-18D480.48
eyeball, neonate N00.CNhs11207.633-15C689.54
eyeball, neonate N01.CNhs11140.1532-43E7105.82
eyeball, neonate N02.CNhs11205.1551-44G8100.35
eyeball, neonate N16.CNhs11188.777-19A2115.38
forelimb, embryo E11.CNhs10596.335-25E281.05
forelimb, embryo E12.CNhs10600.359-14H269.02
forelimb, embryo E13.CNhs10589.384-1E264.05
forelimb, embryo E14.CNhs10577.413-26A874.75
forelimb, embryo E15.CNhs11007.437-20E781.19
forelimb, embryo E17.CNhs10598.1517-43C478.70
forelimb, embryo E18.CNhs11008.1520-43B575.11
gonad, embryo E13.CNhs11044.1564-45I644.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C854.07
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D239.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D551.15
heart, embryo E11.CNhs10586.331-24E964.21
heart, embryo E12.CNhs11015.353-12F573.88
heart, embryo E13.CNhs11013.376-3I973.11
heart, embryo E14.CNhs10597.403-26D471.50
heart, embryo E15.CNhs11017.431-16C871.62
heart, embryo E16.CNhs11021.457-17C677.44
heart, embryo E17.CNhs11025.479-18E585.81
heart, embryo E18.CNhs11030.1283-20G379.41
heart, neonate N00.CNhs11213.639-21E394.00
heart, neonate N03.CNhs11221.1349-25I288.04
heart, neonate N10.CNhs11118.749-24G199.98
heart, neonate N16.CNhs11209.782-15G192.90
heart, neonate N20.CNhs11127.821-26I689.18
heart, neonate N25.CNhs11196.1351-25D399.24
heart, neonate N30.CNhs11202.1390-42D291.66
hippocampus, adult.CNhs10478.13-16E8126.80
hippocampus, neonate N00.CNhs11228.627-43G1207.15
intestinal mucosa, adult.CNhs10506.860-29I3134.15
intestine, adult.CNhs10496.178-9A3100.23
intestine, embryo E12.CNhs11019.1251-16I556.09
intestine, embryo E13.CNhs11010.381-16D558.29
intestine, embryo E15.CNhs10602.976-16D859.28
intestine, embryo E16.CNhs10585.463-22H456.27
intestine, embryo E17.CNhs10582.482-18D365.82
intestine, embryo E18.CNhs10526.1289-20F785.60
intestine, neonate N00.CNhs11126.644-26D1101.07
intestine, neonate N01.CNhs11192.1322-23E997.50
intestine, neonate N06.CNhs11102.688-20B899.03
intestine, neonate N07.CNhs11095.720-20F278.79
intestine, neonate N10.CNhs11098.755-23A594.75
intestine, neonate N20.CNhs11187.827-18D195.27
intestine, neonate N25.CNhs11121.1352-25E399.42
intestine, neonate N30.CNhs11131.1384-42G1106.94
kidney, embryo E14.CNhs10606.411-4I971.69
kidney, embryo E15.CNhs10997.434-16F862.95
kidney, embryo E16.CNhs10584.464-22A571.01
kidney, embryo E17.CNhs11028.483-18I255.19
kidney, embryo E18.CNhs11001.1288-20C750.62
kidney, neonate N00.CNhs11214.646-21G761.37
kidney, neonate N10.CNhs11206.758-6D565.32
kidney, neonate N20.CNhs11113.832-19I155.65
kidney, neonate N25.CNhs11122.1353-25F366.88
kidney, neonate N30.CNhs11203.1385-42H166.14
liver, adult pregnant day01.CNhs10466.508-5B264.33
liver, embryo E12.CNhs10601.355-15F851.22
liver, embryo E13.CNhs10524.378-3H654.64
liver, embryo E14.CNhs10594.409-16E158.24
liver, embryo E15.CNhs10520.433-16D755.38
liver, embryo E16.CNhs10523.462-17F557.88
liver, embryo E17.CNhs10510.481-18A352.96
liver, embryo E18.CNhs10579.499-43G449.48
liver, neonate N00.CNhs11117.641-24F451.88
liver, neonate N03.CNhs11123.1345-25G252.17
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H244.66
liver, neonate N10.CNhs11115.751-24B950.86
liver, neonate N20.CNhs11220.823-25A356.83
liver, neonate N25.CNhs11198.1368-26H156.15
liver, neonate N30.CNhs11106.1382-42D165.13
lung, adult.CNhs10474.28-22B191.45
lung, embryo E12.CNhs10522.354-16G258.36
lung, embryo E14.CNhs10604.404-26F875.78
lung, embryo E15.CNhs11020.432-17C569.43
lung, embryo E16.CNhs10998.458-17B663.60
lung, embryo E17.CNhs10605.480-44A662.14
lung, embryo E18.CNhs10583.1287-20I668.08
lung, neonate N00.CNhs11224.640-42C675.71
lung, neonate N06.CNhs11212.683-20E585.91
lung, neonate N07.CNhs11111.715-19A387.26
lung, neonate N10.CNhs11219.750-23E680.68
lung, neonate N20.CNhs11109.822-18A487.01
lung, neonate N25.CNhs11119.1359-25C789.45
lung, neonate N30.CNhs11133.1394-42H295.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A167.86
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A189.20
mammary gland, adult lactating day02.CNhs10480.595-22B663.44
mammary gland, adult pregnant day19.CNhs10476.588-5H258.22
medulla oblongata, adult.CNhs10477.17-12C2165.05
medulla oblongata, neonate N30.CNhs11200.1396-42A3142.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C786.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C295.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E167.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E264.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E368.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D758.31
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D860.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D957.75
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D470.44
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D564.30
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D684.59
olfactory brain, adult.CNhs10489.18-22I9127.89
ovary, adult.CNhs10507.91-2I765.72
ovary, embryo E18.CNhs11040.505-44H766.77
ovary, neonate N00.CNhs11217.1299-22I461.41
oviduct, adult pregnant day01.CNhs10500.988-6G663.35
pancreas, adult.CNhs10486.34-16E455.75
pancreas, embryo E14.CNhs11012.405-44F454.87
pancreas, embryo E15.CNhs11042.1556-45F254.12
pancreas, embryo E16.CNhs11003.460-26E551.30
pancreas, embryo E17.CNhs10599.1558-45G362.31
pancreas, embryo E18.CNhs10580.1535-43I751.96
pancreas, neonate N00.CNhs11105.645-26G972.36
pancreas, neonate N01.CNhs11138.1531-43D749.44
pancreas, neonate N02.CNhs11139.1539-43D853.47
pancreas, neonate N16.CNhs11136.787-43B653.73
pancreas, neonate N25.CNhs11094.1555-45E247.44
pancreas, neonate N30.CNhs11182.1548-44H533.00
pituitary gland, adult.CNhs10493.21-1G874.56
pituitary gland, embryo E12.CNhs11018.346-16E663.56
pituitary gland, embryo E13.CNhs11009.370-44C778.52
pituitary gland, embryo E14.CNhs11037.398-44A574.59
pituitary gland, embryo E15.CNhs10592.427-16B966.15
pituitary gland, embryo E16.CNhs11036.449-43F669.92
pituitary gland, embryo E17.CNhs11039.1265-44F572.40
pituitary gland, neonate N00.CNhs11190.1308-22E991.34
placenta, adult pregnant day10.CNhs10472.539-13I773.92
placenta, adult pregnant day17.CNhs10464.577-18G392.36
prostate, adult.CNhs10470.859-1F875.42
skin, adult.CNhs10492.30-1C385.08
skin, neonate N00.CNhs11124.650-25G499.14
skin, neonate N03.CNhs11215.662-22H398.19
skin, neonate N06.CNhs11097.693-20I5117.82
skin, neonate N10.CNhs11108.762-6C4110.96
small intestine, neonate N16.CNhs11114.790-21I199.39
spinal cord, adult.CNhs10505.24-13C9164.47
spleen, adult.CNhs10465.25-2G256.56
spleen, embryo E16.CNhs11035.461-43C160.68
spleen, embryo E18.CNhs11011.1271-21F262.04
spleen, neonate N10.CNhs11116.752-24D169.51
spleen, neonate N20.CNhs11112.824-19H165.61
spleen, neonate N25.CNhs11099.1354-25G370.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C948.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D353.07
stomach, adult.CNhs10503.33-1H667.78
stomach, embryo E12.CNhs10588.356-43E363.58
stomach, embryo E15.CNhs10603.1252-16G863.23
stomach, embryo E16.CNhs11022.459-17D469.56
stomach, embryo E17.CNhs11006.1035-18D579.24
stomach, embryo E18.CNhs10999.1286-20C676.21
stomach, neonate N03.CNhs11193.1340-24B881.46
stomach, neonate N07.CNhs11210.718-18A974.97
stomach, neonate N25.CNhs11104.1355-25E476.43
stomach, neonate N30.CNhs11134.1386-42I1104.86
submandibular gland, adult.CNhs10469.59-29C162.76
testis, adult.CNhs10504.57-7G5498.87
testis, embryo E13.CNhs11031.389-23F547.40
testis, embryo E15.CNhs11034.443-27C553.94
testis, embryo E16.CNhs11033.470-26G554.64
testis, embryo E17.CNhs11029.486-18I562.00
testis, embryo E18.CNhs11027.503-18G554.40
testis, neonate N00.CNhs11189.1300-22B760.67
testis, neonate N07.CNhs11222.726-26I443.23
testis, neonate N10.CNhs11204.763-44D942.36
testis, neonate N20.CNhs11110.839-18H3206.80
testis, neonate N30.CNhs11130.1391-42E2271.32
thymus, adult.CNhs10471.38-12B590.70
thymus, embryo E14.CNhs11041.402-44I469.33
thymus, embryo E15.CNhs11005.430-45I263.27
thymus, embryo E16.CNhs11002.456-26C559.63
thymus, embryo E17.CNhs10581.478-18C164.99
thymus, embryo E18.CNhs10595.1273-19G475.50
thymus, neonate N02.CNhs11181.1541-43F876.20
thymus, neonate N03.CNhs11137.2104-43C784.63
thymus, neonate N06.CNhs11197.681-26C481.18
thymus, neonate N07.CNhs11211.713-19D379.41
thymus, neonate N10.CNhs11194.748-24E490.14
thymus, neonate N20.CNhs11186.820-7A286.45
thymus, neonate N25.CNhs11125.1362-25G783.80
thymus, neonate N30.CNhs11132.1393-42G293.74
tongue, adult.CNhs10499.32-1B4102.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H345.51
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F775.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G562.96
urinary bladder, adult.CNhs10481.879-12E482.88
uterus, adult pregnant day19.CNhs10497.590-15F576.39
uterus, adult.CNhs10509.92-27E567.95
vagina, adult.CNhs10502.89-27D5105.04
vesicular gland, adult.CNhs10491.51-27F868.21
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1100.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2121.53
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3127.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7121.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A497.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A583.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A699.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7109.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8111.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A998.37
whole body, embryo E11.CNhs11014.324-5I886.87
whole body, embryo E12.CNhs10587.857-27C977.81
whole body, embryo E13.CNhs10512.372-23H284.00
whole body, embryo E14.5.CNhs10578.420-27D271.47
whole body, embryo E14.CNhs10519.395-14B185.31
whole body, embryo E16.CNhs10514.453-14F259.75
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G570.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G570.46
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G574.45
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G567.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G577.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G569.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G569.76
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G572.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G571.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G573.83
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G560.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G567.71
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G564.29
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G555.49
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G573.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G559.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G561.99
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G565.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G565.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G569.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G568.42
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G563.14
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G567.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G562.85
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G559.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G566.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G561.79
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G567.09
whole body, embryo E17.5.CNhs10513.490-9F971.57
whole body, embryo E17.CNhs10517.475-3I5124.66
whole body, embryo E18.CNhs10516.493-3B382.11
whole body, neonate N00.CNhs10525.657-19C284.23
whole body, neonate N01.CNhs10576.659-23C688.57
whole body, neonate N06.CNhs10515.692-21D181.40
whole body, neonate N10.CNhs10518.761-6B467.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.63e-1423
neuroblast (sensu Vertebrata)6.63e-1423
neural cell4.24e-1243
ectodermal cell8.79e-1244
neurectodermal cell8.79e-1244
electrically responsive cell4.98e-0939
electrically active cell4.98e-0939
neuron1.06e-0733
neuronal stem cell1.06e-0733
neuroblast1.06e-0733
electrically signaling cell1.06e-0733

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.13e-2295
ectoderm1.13e-2295
presumptive ectoderm1.13e-2295
nervous system5.40e-2175
regional part of nervous system1.94e-2054
central nervous system9.36e-2073
neural tube1.30e-1952
neural rod1.30e-1952
future spinal cord1.30e-1952
neural keel1.30e-1952
neurectoderm5.04e-1964
neural plate5.04e-1964
presumptive neural plate5.04e-1964
ecto-epithelium4.97e-1873
gray matter3.43e-1734
brain1.28e-1647
future brain1.28e-1647
regional part of brain4.05e-1646
structure with developmental contribution from neural crest4.42e-1692
brain grey matter2.27e-1429
regional part of telencephalon2.27e-1429
telencephalon2.27e-1429
pre-chordal neural plate4.64e-1449
anterior neural tube2.92e-1340
regional part of forebrain1.06e-1239
forebrain1.06e-1239
future forebrain1.06e-1239
cerebral cortex3.81e-1021
cerebral hemisphere3.81e-1021
pallium3.81e-1021
regional part of cerebral cortex7.30e-0817
posterior neural tube2.49e-0712
chordal neural plate2.49e-0712
tube2.86e-07114
germ layer4.19e-07291
germ layer / neural crest4.19e-07291
embryonic tissue4.19e-07291
presumptive structure4.19e-07291
germ layer / neural crest derived structure4.19e-07291
epiblast (generic)4.19e-07291
anatomical conduit4.66e-07122
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