FFCP PHASE1:Mm9::chr11:86887575..86887618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66569 | |EntrezGene=66569 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CRY7 | |UniProt=Q9CRY7 | ||
|association_with_transcript=-11bp_to_ENSMUST00000020804_5end | |association_with_transcript=-11bp_to_ENSMUST00000020804_5end | ||
|cluster_id=chr11:86887575..86887618,- | |||
|description=CAGE_peak_2_at_Gdpd1_5end | |description=CAGE_peak_2_at_Gdpd1_5end | ||
|id=chr11:86887575..86887618,- | |id=chr11:86887575..86887618,- | ||
|ontology_enrichment_celltype=CL:0000540!1.17e-14!33;CL:0000047!1.17e-14!33;CL:0000031!1.17e-14!33;CL:0000404!1.17e-14!33;CL:0000393!7.17e-14!39;CL:0000211!7.17e-14!39;CL:0000117!2.58e-13!23;CL:0000337!2.58e-13!23;CL:0000221!9.81e-12!44;CL:0000133!9.81e-12!44;CL:0002319!1.83e-11!43;CL:0000055!1.34e-10!50;CL:0002321!4.74e-09!70;CL:0000220!4.74e-09!70 | |ontology_enrichment_celltype=CL:0000540!1.17e-14!33;CL:0000047!1.17e-14!33;CL:0000031!1.17e-14!33;CL:0000404!1.17e-14!33;CL:0000393!7.17e-14!39;CL:0000211!7.17e-14!39;CL:0000117!2.58e-13!23;CL:0000337!2.58e-13!23;CL:0000221!9.81e-12!44;CL:0000133!9.81e-12!44;CL:0002319!1.83e-11!43;CL:0000055!1.34e-10!50;CL:0002321!4.74e-09!70;CL:0000220!4.74e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-14,33;CL:0000047,1.10e-14,33;CL:0000031,1.10e-14,33;CL:0000404,1.10e-14,33;CL:0000393,6.76e-14,39;CL:0000211,6.76e-14,39;CL:0000117,2.44e-13,23;CL:0000337,2.44e-13,23;CL:0000221,1.15e-11,44;CL:0000133,1.15e-11,44;CL:0002319,2.16e-11,43;CL:0002321,3.38e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.62e-23!75;UBERON:0001016!5.62e-23!75;UBERON:0001017!1.73e-22!73;UBERON:0005743!1.73e-22!73;UBERON:0000033!7.84e-20!63;UBERON:0004121!2.90e-19!102;UBERON:0000924!2.90e-19!102;UBERON:0006601!2.90e-19!102;UBERON:0001049!1.80e-18!52;UBERON:0005068!1.80e-18!52;UBERON:0006241!1.80e-18!52;UBERON:0007135!1.80e-18!52;UBERON:0002020!2.17e-17!34;UBERON:0002346!3.49e-17!71;UBERON:0003075!3.49e-17!71;UBERON:0007284!3.49e-17!71;UBERON:0000955!4.10e-17!50;UBERON:0006238!4.10e-17!50;UBERON:0002616!9.63e-17!49;UBERON:0003056!2.77e-16!49;UBERON:0002791!5.13e-15!29;UBERON:0003528!5.13e-15!29;UBERON:0001893!5.13e-15!29;UBERON:0003080!5.16e-15!40;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0000956!6.68e-11!21;UBERON:0001869!6.68e-11!21;UBERON:0000203!6.68e-11!21;UBERON:0002619!1.51e-08!17;UBERON:0000468!5.33e-07!333;UBERON:0000344!5.90e-07!15;UBERON:0007811!6.28e-07!86;UBERON:0002021!7.27e-07!10;UBERON:0000411!7.27e-07!10;UBERON:0001950!7.27e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!5.62e-23!75;UBERON:0001016!5.62e-23!75;UBERON:0001017!1.73e-22!73;UBERON:0005743!1.73e-22!73;UBERON:0000033!7.84e-20!63;UBERON:0004121!2.90e-19!102;UBERON:0000924!2.90e-19!102;UBERON:0006601!2.90e-19!102;UBERON:0001049!1.80e-18!52;UBERON:0005068!1.80e-18!52;UBERON:0006241!1.80e-18!52;UBERON:0007135!1.80e-18!52;UBERON:0002020!2.17e-17!34;UBERON:0002346!3.49e-17!71;UBERON:0003075!3.49e-17!71;UBERON:0007284!3.49e-17!71;UBERON:0000955!4.10e-17!50;UBERON:0006238!4.10e-17!50;UBERON:0002616!9.63e-17!49;UBERON:0003056!2.77e-16!49;UBERON:0002791!5.13e-15!29;UBERON:0003528!5.13e-15!29;UBERON:0001893!5.13e-15!29;UBERON:0003080!5.16e-15!40;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0000956!6.68e-11!21;UBERON:0001869!6.68e-11!21;UBERON:0000203!6.68e-11!21;UBERON:0002619!1.51e-08!17;UBERON:0000468!5.33e-07!333;UBERON:0000344!5.90e-07!15;UBERON:0007811!6.28e-07!86;UBERON:0002021!7.27e-07!10;UBERON:0000411!7.27e-07!10;UBERON:0001950!7.27e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.47e-23,75;UBERON:0001017,2.00e-22,73;UBERON:0004121,5.53e-22,95;UBERON:0000924,5.53e-22,95;UBERON:0006601,5.53e-22,95;UBERON:0002346,1.16e-20,64;UBERON:0003075,1.16e-20,64;UBERON:0007284,1.16e-20,64;UBERON:0000073,3.88e-19,54;UBERON:0001049,2.14e-18,52;UBERON:0005068,2.14e-18,52;UBERON:0006241,2.14e-18,52;UBERON:0007135,2.14e-18,52;UBERON:0010371,1.04e-17,73;UBERON:0002020,2.01e-17,34;UBERON:0003056,2.59e-16,49;UBERON:0000955,7.14e-16,47;UBERON:0006238,7.14e-16,47;UBERON:0002616,1.66e-15,46;UBERON:0003528,4.81e-15,29;UBERON:0002791,4.81e-15,29;UBERON:0001893,4.81e-15,29;UBERON:0003080,4.84e-15,40;UBERON:0002780,1.18e-14,39;UBERON:0001890,1.18e-14,39;UBERON:0006240,1.18e-14,39;UBERON:0010314,2.27e-14,92;UBERON:0000956,6.39e-11,21;UBERON:0001869,6.39e-11,21;UBERON:0000203,6.39e-11,21;UBERON:0002619,1.46e-08,17;UBERON:0011216,1.04e-07,194;UBERON:0000344,5.75e-07,15;UBERON:0000922,6.66e-07,320;UBERON:0002021,7.09e-07,10;UBERON:0000411,7.09e-07,10;UBERON:0001950,7.09e-07,10 | |||
|phase1_expression=10.4096750618116,28.2670080187882,23.6599604482559,26.616850595001,25.0447864973174,16.9558064631009,18.9226238882376,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,3.66420737997229,2.42970320867791,3.49780939064073,0,0.137114433605739,0,48.3896320959587,1.39007331681239,0.522399578277871,24.798825532978,28.6761601333963,29.285830169866,31.4456257196125,29.9505013433386,68.2184075848382,63.5115926995026,44.1243716204056,4.44521471421742,1.23012957516914,0,9.82095507154334,11.137721239019,7.55426618170766,0.418531630736908,0,0,0,0,0,11.2048167998264,13.0776241273174,11.3798986340243,0.782391344348039,9.59310688073965,5.27246838562732,3.69416808241138,3.21968769738334,7.18762821824858,0,0.725362142011344,0,4.11615097657515,5.73066879877513,3.6097046459421,38.237811102464,59.2469896784677,40.5652098243955,0.677689064138264,0,2.6996991518442,4.94433181283487,2.8419204597844,4.19440154725767,2.68952813725088,54.2296672373338,59.807630680939,57.2083894875759,25.1372866275347,30.0381215694194,48.016393292262,38.7215702913675,54.2339084099912,14.3150645299205,22.472971502993,27.9563890526363,36.6643879889939,34.5823292817108,40.6312429034273,25.684835908127,31.5147061617741,27.6564828476026,27.6950870345248,23.7760706934502,35.4158947068071,10.2230360999798,12.2425927372993,2.31891590961342,1.72084775396277,2.03991400112325,3.77792234146472,0,0,10.9546647702766,0,0.259786004602869,0,13.9434985578914,0,0,0,6.27824018932521,8.36087556067825,5.56076889516262,12.1034912502204,1.03575153458869,3.85949561568544,2.94925055502431,5.48037860961854,3.45923245884088,2.71300752994721,3.64524992120685,2.01066546127481,2.22475470960936,0.289198713839823,1.76922110389975,3.23533699894818,2.65009822152472,1.93950101254089,16.775258509631,16.1029438356351,18.6407569063975,31.1657607354481,0.11981512450592,0.599902730993408,0.127070227073065,23.2175491077475,21.9600289352941,47.8743081550013,25.5521750682646,30.4301394223093,22.8566849015516,25.1473957755024,5.39748628406676,2.61254638281195,6.06534620240819,13.6787206326208,5.59517904739626,8.5063778640385,8.64298223065676,9.79581315932148,15.4442853073514,14.6049641124729,13.5867500611607,9.31332134660456,4.31135985865684,4.9167580843633,3.34307135911503,2.84954452155847,2.78047249225598,2.089512999133,3.70407845534298,4.57778813682534,0,0,0,3.31401236056803,5.39409937956521,5.94204802821349,6.62885259638589,5.3126342571799,5.86215028972037,4.65067889500816,4.82892122519315,5.83826711835847,4.44311594766397,4.43252153013557,4.70199095365963,4.9707995724613,3.29325172936576,4.56301823785264,26.0759536219518,59.1701521180885,31.7202031664446,36.4941781995691,3.83918850963421,4.87697010906921,3.8660238396628,4.03367049246685,6.89371935919098,6.08722003560189,18.9811624617805,7.74085087202851,3.2673577144035,5.76973768919337,4.09424582950152,17.9763881730844,23.5590474363417,21.9055400579804,7.96605184002943,5.25543158004753,3.38123207019241,6.10953983535943,7.95205197387266,3.64706263429657,2.97211724484009,1.18088118383682,1.255989822731,2.71473760627961,1.1858105083486,1.66845105716094,3.53806191203765,2.9232074610031,3.24576194221605,0.964708639009667,1.52775511068852,0.287696137450811,0.486405680325106,1.09824565275233,0,0.744281895337007,0.936113019343682,0.252578877947112,0.896987067609561,0.964887042726734,12.5632169313291,3.41084541186873,3.7481944581666,4.2436271443797,4.92849521405854,5.3602002381381,8.33152743101048,9.95181604074774,5.2019597555043,3.10050565508285,5.42146213435456,8.68475567993411,4.83517949224508,11.1379775107764,15.0791283939272,16.3171705145613,0.491764273019036,1.65562047782839,23.7614873181932,22.2702204525186,1.63934945376675,3.28212205365685,11.3582958989852,12.4940398174924,13.5716740571663,9.31978312014953,10.2487390077901,12.4553673547086,9.31064613852257,9.35218745316198,16.602086673754,20.8858855674175,5.25178315270594,5.1639025063504,7.32991317091092,4.78413356620353,6.63725691699814,4.37005145078967,5.44182402536552,4.90373207365335,1.77181135728464,3.68922177532713,4.9101375701962,3.63533729477506,2.13898427030833,5.37262488490887,5.27093042874994,1.03135543248187,5.7874732978144,6.30213829109586,6.72665155670323,9.43082954139006,10.1083933176096,8.02659679209317,8.06290200950393,3.65357938937519,1.17335854031855,1.69465656691056,11.0264199027481,2.80306630000516,5.9741837877485,3.79971427047382,5.49112782414428,4.26766339337159,9.32738677215522,25.4032663754398,3.2465467351592,2.88941615148511,3.1483069652851,2.44878994106098,2.59719032669948,3.66045077130436,0,0.279902904647316,0.138199973804424,14.3200592702267,3.79603192297362,3.04979200690273,6.37231510848627,10.245326504709,8.07941485860857,10.6542833644008,6.69492991375221,8.89970202745701,15.6834117683069,28.5816084019986,280.155390526043,1.49516546043979,2.81279433777066,3.11121901350476,3.48731523389874,3.71703476079712,4.3422178298929,5.59878854828985,9.6470596871654,23.4336597201226,91.8815719962591,4.4241556887945,3.85177909051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| ||
|short_description=p2@Gdpd1 | |short_description=p2@Gdpd1 | ||
}} | }} |
Latest revision as of 21:55, 25 September 2015
Short description: | p2@Gdpd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gdpd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -11bp_to_ENSMUST00000020804_5end |
EntrezGene: | Gdpd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.10e-14 | 33 |
neuronal stem cell | 1.10e-14 | 33 |
neuroblast | 1.10e-14 | 33 |
electrically signaling cell | 1.10e-14 | 33 |
electrically responsive cell | 6.76e-14 | 39 |
electrically active cell | 6.76e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.44e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.44e-13 | 23 |
ectodermal cell | 1.15e-11 | 44 |
neurectodermal cell | 1.15e-11 | 44 |
neural cell | 2.16e-11 | 43 |
embryonic cell | 3.38e-09 | 70 |