FFCP PHASE1:Mm9::chr3:95085755..95085765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229589 | |EntrezGene=229589 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BIW1 | |UniProt=Q8BIW1 | ||
|association_with_transcript=232bp_to_ENSMUST00000015855,NM_173347,uc008qiz.1_5end | |association_with_transcript=232bp_to_ENSMUST00000015855,NM_173347,uc008qiz.1_5end | ||
|cluster_id=chr3:95085755..95085765,- | |||
|description=CAGE_peak_5_at_Prune_5end | |description=CAGE_peak_5_at_Prune_5end | ||
|id=chr3:95085755..95085765,- | |id=chr3:95085755..95085765,- | ||
|ontology_enrichment_celltype=CL:0000117!8.53e-13!23;CL:0000337!8.53e-13!23;CL:0000221!4.31e-07!44;CL:0000133!4.31e-07!44;CL:0002319!7.10e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.82e-31,23;CL:0000337,3.82e-31,23;CL:0000540,4.74e-20,33;CL:0000047,4.74e-20,33;CL:0000031,4.74e-20,33;CL:0000404,4.74e-20,33;CL:0002319,1.47e-17,43;CL:0000221,5.00e-17,44;CL:0000133,5.00e-17,44;CL:0000393,3.85e-16,39;CL:0000211,3.85e-16,39;CL:0002321,1.31e-08,70;CL:0000120,1.04e-07,3;CL:0002613,1.32e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.79e-15!73;UBERON:0005743!4.79e-15!73;UBERON:0001049!5.09e-15!52;UBERON:0005068!5.09e-15!52;UBERON:0006241!5.09e-15!52;UBERON:0007135!5.09e-15!52;UBERON:0002020!2.68e-14!34;UBERON:0000955!4.08e-14!50;UBERON:0006238!4.08e-14!50;UBERON:0000073!1.05e-13!75;UBERON:0001016!1.05e-13!75;UBERON:0002616!1.07e-13!49;UBERON:0003080!6.62e-12!40;UBERON:0000033!1.43e-11!63;UBERON:0002780!1.57e-11!39;UBERON:0001890!1.57e-11!39;UBERON:0006240!1.57e-11!39;UBERON:0002791!2.47e-11!29;UBERON:0003528!2.47e-11!29;UBERON:0001893!2.47e-11!29;UBERON:0004121!5.06e-10!102;UBERON:0000924!5.06e-10!102;UBERON:0006601!5.06e-10!102;UBERON:0002346!2.48e-09!71;UBERON:0003075!2.48e-09!71;UBERON:0007284!2.48e-09!71;UBERON:0003056!5.71e-09!49;UBERON:0000956!6.11e-09!21;UBERON:0001869!6.11e-09!21;UBERON:0000203!6.11e-09!21;UBERON:0002619!4.07e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.87e-24,73;UBERON:0000073,6.05e-24,54;UBERON:0002020,1.40e-23,34;UBERON:0001016,3.61e-23,75;UBERON:0001049,2.07e-19,52;UBERON:0005068,2.07e-19,52;UBERON:0006241,2.07e-19,52;UBERON:0007135,2.07e-19,52;UBERON:0004121,1.70e-16,95;UBERON:0000924,1.70e-16,95;UBERON:0006601,1.70e-16,95;UBERON:0003528,3.69e-16,29;UBERON:0002791,3.69e-16,29;UBERON:0001893,3.69e-16,29;UBERON:0002780,2.02e-15,39;UBERON:0001890,2.02e-15,39;UBERON:0006240,2.02e-15,39;UBERON:0003080,6.61e-15,40;UBERON:0002346,1.64e-14,64;UBERON:0003075,1.64e-14,64;UBERON:0007284,1.64e-14,64;UBERON:0002616,1.07e-13,46;UBERON:0000955,2.73e-13,47;UBERON:0006238,2.73e-13,47;UBERON:0010371,6.56e-12,73;UBERON:0003056,3.11e-11,49;UBERON:0000956,4.89e-11,21;UBERON:0001869,4.89e-11,21;UBERON:0000203,4.89e-11,21;UBERON:0001948,4.86e-10,5;UBERON:0002315,4.86e-10,5;UBERON:0010314,4.47e-09,92;UBERON:0002240,2.75e-08,6;UBERON:0005174,2.75e-08,6;UBERON:0001137,2.75e-08,6;UBERON:0002619,3.72e-08,17;UBERON:0002021,3.91e-07,10;UBERON:0000411,3.91e-07,10;UBERON:0001950,3.91e-07,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.198581902401771,0.261199789138935,0,0,0,0,0.646413698057667,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0,0.418531630736908,0.7813353445238,0,0.588231488031014,1.36609096991689,0,0,0,0.183546752161682,0.782391344348039,0.436050312760893,0.439372365468944,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0,0.286533439938757,0,3.23706337375356,3.70293685490423,4.43681982454325,0.338844532069132,1.77858959222228,0,0.988866362566974,0.7104801149461,0.898800331555214,1.53687322128622,1.14058573539325,1.35005938331691,0.841299845405528,2.85650984403804,2.20868540951614,1.71487118900936,1.34183659425531,0.919218786610021,3.30347642998166,1.65993539510744,1.0752457327937,3.16527090552465,3.65950574409639,3.64639359389732,1.67509799400829,0,1.22238598221448,1.47314292736834,2.27794689278565,1.1183966749518,0,0,0,0,0,0,0,0,0.983110940922263,0.340860645156116,0,0,0.704217098883403,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0.445326417194474,0.346970653532272,0,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0.741584903203122,0,0.884610551949874,0.970601099684455,0.662524555381181,0.969750506270444,1.86391761218122,0.292780797011547,1.25668024088073,0.255457055208591,0,0,0,0.898743836428936,0.915001205637253,0.502617408451458,1.39059456153821,1.02286182932132,1.66230435647648,0.973447578406546,0,0.622034853050465,0,0.631325567659422,0.260240885925407,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.655912071918102,0.258703370739016,0.215567992932842,0.756424320671277,0.351902248327898,0.657587197282725,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0.284163499395593,2.07125772535502,0.234526059981096,0.720248245844059,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.817357396570186,0.329119699826961,0.820837320395476,0.810688095458557,0.438599962275997,0.878200461164203,0.402619256281115,0.420579897128254,1.3377599609307,0.330418782983798,0.264450566663544,0.426576501070468,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.442655759869801,0.295220295959204,0.627994911365499,0.370191491765402,0.592905254174298,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0.964887042726734,0.184753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,0.167506257441816,0.714130922658041,0,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0.54390568381871,0,0,0.481651769963376,0.234423373184406,0.491804836130026,1.26235463602186,0,0,0.215423397732799,0.477937595905104,0,0,0.404810701674894,0,0,0.963963949265421,0,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,1.209294227859,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0,0,0,1.02131881726136,0.36012218806262,0.258717367565509,1.07168517515796,0.354680467284547,0,0.822745103010605,0.304464949114599,1.40803024838226,1.48282449604674,0.441056796109924,0.8244312647074,0.322928853391811,0.180938774784468,0.238744688006273,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,0.474503990371703,0,0.324016022465404,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.747582730219894,0.330916980914195,0.583353565032143,0.387479470433193,0.675824501963113,0.234714477291508,0.651021924219751,0.419437377702843,0.724752362478018,0.576060012515731,0,0.405450430580328,0.205421914329655,0.389762468933385,0.358053391334963,0.39736270956253,0.480781798079875,0.295379054349154,0.504832249740738,0.0762068066549998,0.302478555410522,0.194915761479505,0.673482891482306,0,0.906921534460845,0.221985953374065,0.448569283047378,0.503653849092235,0.579568782096571,0,0,0.214368379079066,0.501572104035363,0.564751842617067,2.30162618253588,2.29158205375759,0.343706364687375,2.74033007908257,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,1.55328093525546,0.31136204275253,0.798049746802062,0.170733605754134,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,1.03017528619447,0.64183841918363,1.01078884705519,0.50695859978048,0.377252682772152,0.936415074698824,0.89635213366817,0.804096565378586,0.476293691283074,1.27472758539341,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.715308569841963,0.290692833264657,0.658765662907314,0.423073039458382,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,0.5931750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| ||
|short_description=p5@Prune | |short_description=p5@Prune | ||
}} | }} |
Latest revision as of 23:12, 25 September 2015
Short description: | p5@Prune |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Prune_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 232bp_to_ENSMUST00000015855, NM_173347, uc008qiz.1_5end |
EntrezGene: | Prune |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.82e-31 | 23 |
neuroblast (sensu Vertebrata) | 3.82e-31 | 23 |
neuron | 4.74e-20 | 33 |
neuronal stem cell | 4.74e-20 | 33 |
neuroblast | 4.74e-20 | 33 |
electrically signaling cell | 4.74e-20 | 33 |
neural cell | 1.47e-17 | 43 |
ectodermal cell | 5.00e-17 | 44 |
neurectodermal cell | 5.00e-17 | 44 |
electrically responsive cell | 3.85e-16 | 39 |
electrically active cell | 3.85e-16 | 39 |
embryonic cell | 1.31e-08 | 70 |
granule cell | 1.04e-07 | 3 |
striatum neuron | 1.32e-07 | 3 |