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FFCP PHASE1:Mm9::chr5:34631056..34631118,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:34631056..34631118,-
|DHSsupport=NA
|short_description=p1@Zfyve28
|DPIdataset=NA
|description=CAGE_peak_1_at_Zfyve28_5end
|association_with_transcript=0bp_to_ENSMUST00000114368,ENSMUST00000114369_5end
|EntrezGene=231125
|EntrezGene=231125
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=D3Z3F0,D3Z3E9
|UniProt=D3Z3F0,D3Z3E9
|association_with_transcript=0bp_to_ENSMUST00000114368,ENSMUST00000114369_5end
|cluster_id=chr5:34631056..34631118,-
|description=CAGE_peak_1_at_Zfyve28_5end
|id=chr5:34631056..34631118,-
|ontology_enrichment_celltype=CL:0000221!1.95e-17!44;CL:0000133!1.95e-17!44;CL:0002319!7.30e-17!43;CL:0000540!2.83e-14!33;CL:0000047!2.83e-14!33;CL:0000031!2.83e-14!33;CL:0000404!2.83e-14!33;CL:0000055!6.44e-13!50;CL:0000393!5.23e-11!39;CL:0000211!5.23e-11!39;CL:0000117!8.27e-10!23;CL:0000337!8.27e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000221,1.28e-23,44;CL:0000133,1.28e-23,44;CL:0002319,8.23e-23,43;CL:0000540,1.42e-18,33;CL:0000047,1.42e-18,33;CL:0000031,1.42e-18,33;CL:0000404,1.42e-18,33;CL:0000393,6.03e-14,39;CL:0000211,6.03e-14,39;CL:0000117,3.04e-13,23;CL:0000337,3.04e-13,23;CL:0002321,2.61e-10,70;CL:0000107,1.83e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.68e-35!75;UBERON:0001016!1.68e-35!75;UBERON:0004121!7.39e-35!102;UBERON:0000924!7.39e-35!102;UBERON:0006601!7.39e-35!102;UBERON:0001017!9.22e-35!73;UBERON:0005743!9.22e-35!73;UBERON:0000033!4.26e-26!63;UBERON:0002346!2.04e-25!71;UBERON:0003075!2.04e-25!71;UBERON:0007284!2.04e-25!71;UBERON:0001049!1.24e-23!52;UBERON:0005068!1.24e-23!52;UBERON:0006241!1.24e-23!52;UBERON:0007135!1.24e-23!52;UBERON:0000955!3.18e-23!50;UBERON:0006238!3.18e-23!50;UBERON:0002616!1.61e-22!49;UBERON:0003056!6.93e-21!49;UBERON:0003080!1.91e-18!40;UBERON:0002780!7.01e-18!39;UBERON:0001890!7.01e-18!39;UBERON:0006240!7.01e-18!39;UBERON:0002020!1.13e-17!34;UBERON:0002791!1.50e-15!29;UBERON:0003528!1.50e-15!29;UBERON:0001893!1.50e-15!29;UBERON:0000153!4.52e-13!94;UBERON:0007811!8.73e-13!86;UBERON:0000956!2.60e-12!21;UBERON:0001869!2.60e-12!21;UBERON:0000203!2.60e-12!21;UBERON:0002619!1.15e-10!17;UBERON:0002021!3.55e-08!10;UBERON:0000411!3.55e-08!10;UBERON:0001950!3.55e-08!10;UBERON:0000468!3.34e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.19e-47,75;UBERON:0001017,4.70e-46,73;UBERON:0004121,1.17e-43,95;UBERON:0000924,1.17e-43,95;UBERON:0006601,1.17e-43,95;UBERON:0002346,3.57e-36,64;UBERON:0003075,3.57e-36,64;UBERON:0007284,3.57e-36,64;UBERON:0000073,3.14e-33,54;UBERON:0010371,1.29e-31,73;UBERON:0001049,1.82e-31,52;UBERON:0005068,1.82e-31,52;UBERON:0006241,1.82e-31,52;UBERON:0007135,1.82e-31,52;UBERON:0000955,3.30e-28,47;UBERON:0006238,3.30e-28,47;UBERON:0002616,3.08e-27,46;UBERON:0003056,1.79e-25,49;UBERON:0002020,2.13e-24,34;UBERON:0003080,1.49e-23,40;UBERON:0002780,9.16e-23,39;UBERON:0001890,9.16e-23,39;UBERON:0006240,9.16e-23,39;UBERON:0003528,2.22e-21,29;UBERON:0002791,2.22e-21,29;UBERON:0001893,2.22e-21,29;UBERON:0010314,2.06e-20,92;UBERON:0000956,8.69e-17,21;UBERON:0001869,8.69e-17,21;UBERON:0000203,8.69e-17,21;UBERON:0002619,1.87e-14,17;UBERON:0002021,6.21e-11,10;UBERON:0000411,6.21e-11,10;UBERON:0001950,6.21e-11,10;UBERON:0003076,3.32e-08,12;UBERON:0003057,3.32e-08,12;UBERON:0000010,4.13e-08,11;UBERON:0002410,1.83e-07,9;UBERON:0000025,2.06e-07,114;UBERON:0004111,6.00e-07,122
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,0.377690453926732,0.709638518536602,0.183546752161682,0,5.01457859675027,4.83309602015838,3.11087838518853,2.09979632438044,1.43752564364972,0,0,0,0.257259436035947,0,0,2.02316460859598,1.05798195854407,4.43681982454325,0.677689064138264,0,0,0,0,3.29560121570245,6.14749288514487,3.42175720617976,2.02508907497536,2.3135745748652,2.57085885963423,4.41737081903227,2.20483438586917,1.0543001812006,2.75765635983006,8.8092704799511,5.61824287574826,6.29786786350598,2.1101806036831,1.46380229763855,1.56274011167028,6.42120897703176,5.6276261003168,3.36156145108982,2.65165726926301,2.98980529678116,3.54158947068071,1.36307147999731,2.56943304363071,2.89864488701678,0,0,0,0,0,0.280888840263504,0,0,0,5.63373679106722,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0.753613202763113,0.117588707135705,0.251333182659351,0.494389935468748,1.01219549843938,0.884610551949874,1.45590164952668,0.441683036920787,0,0,28.9852989041432,29.3225389538837,0,0,0.599902730993408,0.254140454146129,5.54225365797844,9.60751265919116,2.38743269014442,19.9897968221118,16.1100738118108,4.36354893575076,7.78758062725237,0.101839363850316,0.746441823660558,0.252722758433675,4.41927897361595,0.780722657776222,1.14951052216736,1.26043490863744,0.753524089178575,2.4493139694478,2.562274405697,2.62364828767241,7.76110112217047,0.215567992932842,0.945530400839096,1.40760899331159,0.43839146485515,1.94633074457919,1.74126083261083,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.473489471170421,0.787056926989615,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0.492502392237286,1.29710095273369,0.438599962275997,0.439100230582101,0.268412837520744,12.1968170167194,3.91037527041281,0,0.528901133327089,0.426576501070468,1.16118335930219,0.902072229254653,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.571242563048644,0,0.814605311381257,0.581857461502877,0.210407459670956,0.126473074248515,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,0.568474235311454,0.325929952884052,0,0,0,0.476087281772027,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.81931657357869,0.863424909329478,1.44649058581512,0,0,0,0.275936746304732,7.70642831941401,7.2671245687166,0,0.757412781613119,5.04813151066011,6.63745865304285,4.09304455692318,5.25731355495614,3.7875774594007,5.94460714656548,2.83367491172426,5.26060544240361,3.55759000151871,11.2462460747632,0.425820255624806,1.24645922567079,0.488660878060728,1.15479086080775,0,0,0,0,1.18120757152309,0.307435147943927,0.516856586336442,0,0.356497378384721,0,1.05418608574999,1.03135543248187,3.74483566329167,1.26042765821917,1.03486947026204,0.857348140126369,1.41872186913819,2.31879462882692,1.15184314421485,0.913394847343798,0.23467170806371,0.21183207086382,0.661585194164886,0.32977250588296,0.807322133479528,1.38719727334758,0.835606408021955,0.656563598980245,0.582961673259701,8.71498919449395,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0.813277868507395,0.972048067396211,0,0.436725127492355,0.404593039154462,0.330613822901344,0.523511883968059,0.388844919875379,0.621339313086926,0,0.598066184175915,0.827292452285488,2.13896307178452,2.71235629303235,4.73077151374179,6.57200536416222,4.1665403150064,1.99232754408851,0.483168241652012,0.288030006257865,0.316011120628178,0.810900861160657,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.54551675225752,0,0.183151624267265,0.428736758158132,0,10.1655331671072,13.3494318587081,9.73922372846974,24.0594455281163,19.182310553578,24.1726047164704,21.6007200074178,25.6683085837806,18.1256963593682,24.8524949640874,0.62272408550506,0.798049746802062,1.36586884603307,0.972426868273176,1.25767897576789,0.735374033800057,0.666740183404846,0.618105171716683,1.60459604795908,0.505394423527595,0.50695859978048,0.943131706930381,0.936415074698824,1.34452820050225,1.49332219284595,1.42888107384922,1.73826488917283,0.77163688185482,2.06042950401653,1.17759136107518,1.37147700954166,0.354951612318675,1.1921809497366,1.88950341622027,1.2234219453993,1.09998990259179,0.182927972872773,1.05227884575137,1.7654534799962,0,0.949080144993393,0.886540341380071,0,1.08455788830176,0.771626443924566,0.749431733813838,1.40358965067245,0.429742108096597,0.382576664137687,0.220591419119515,2.31867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,0.377690453926732,0.709638518536602,0.183546752161682,0,5.01457859675027,4.83309602015838,3.11087838518853,2.09979632438044,1.43752564364972,0,0,0,0.257259436035947,0,0,2.02316460859598,1.05798195854407,4.43681982454325,0.677689064138264,0,0,0,0,3.29560121570245,6.14749288514487,3.42175720617976,2.02508907497536,2.3135745748652,2.57085885963423,4.41737081903227,2.20483438586917,1.0543001812006,2.75765635983006,8.8092704799511,5.61824287574826,6.29786786350598,2.1101806036831,1.46380229763855,1.56274011167028,6.42120897703176,5.6276261003168,3.36156145108982,2.65165726926301,2.98980529678116,3.54158947068071,1.36307147999731,2.56943304363071,2.89864488701678,0,0,0,0,0,0.280888840263504,0,0,0,5.63373679106722,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0.753613202763113,0.117588707135705,0.251333182659351,0.494389935468748,1.01219549843938,0.884610551949874,1.45590164952668,0.441683036920787,0,0,28.9852989041432,29.3225389538837,0,0,0.599902730993408,0.254140454146129,5.54225365797844,9.60751265919116,2.38743269014442,19.9897968221118,16.1100738118108,4.36354893575076,7.78758062725237,0.101839363850316,0.746441823660558,0.252722758433675,4.41927897361595,0.780722657776222,1.14951052216736,1.26043490863744,0.753524089178575,2.4493139694478,2.562274405697,2.62364828767241,7.76110112217047,0.215567992932842,0.945530400839096,1.40760899331159,0.43839146485515,1.94633074457919,1.74126083261083,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.473489471170421,0.787056926989615,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0.492502392237286,1.29710095273369,0.438599962275997,0.439100230582101,0.268412837520744,12.1968170167194,3.91037527041281,0,0.528901133327089,0.426576501070468,1.16118335930219,0.902072229254653,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.571242563048644,0,0.814605311381257,0.581857461502877,0.210407459670956,0.126473074248515,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,0.568474235311454,0.325929952884052,0,0,0,0.476087281772027,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.81931657357869,0.863424909329478,1.44649058581512,0,0,0,0.275936746304732,7.70642831941401,7.2671245687166,0,0.757412781613119,5.04813151066011,6.63745865304285,4.09304455692318,5.25731355495614,3.7875774594007,5.94460714656548,2.83367491172426,5.26060544240361,3.55759000151871,11.2462460747632,0.425820255624806,1.24645922567079,0.488660878060728,1.15479086080775,0,0,0,0,1.18120757152309,0.307435147943927,0.516856586336442,0,0.356497378384721,0,1.05418608574999,1.03135543248187,3.74483566329167,1.26042765821917,1.03486947026204,0.857348140126369,1.41872186913819,2.31879462882692,1.15184314421485,0.913394847343798,0.23467170806371,0.21183207086382,0.661585194164886,0.32977250588296,0.807322133479528,1.38719727334758,0.835606408021955,0.656563598980245,0.582961673259701,8.71498919449395,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0.813277868507395,0.972048067396211,0,0.436725127492355,0.404593039154462,0.330613822901344,0.523511883968059,0.388844919875379,0.621339313086926,0,0.598066184175915,0.827292452285488,2.13896307178452,2.71235629303235,4.73077151374179,6.57200536416222,4.1665403150064,1.99232754408851,0.483168241652012,0.288030006257865,0.316011120628178,0.810900861160657,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.54551675225752,0,0.183151624267265,0.428736758158132,0,10.1655331671072,13.3494318587081,9.73922372846974,24.0594455281163,19.182310553578,24.1726047164704,21.6007200074178,25.6683085837806,18.1256963593682,24.8524949640874,0.62272408550506,0.798049746802062,1.36586884603307,0.972426868273176,1.25767897576789,0.735374033800057,0.666740183404846,0.618105171716683,1.60459604795908,0.505394423527595,0.50695859978048,0.943131706930381,0.936415074698824,1.34452820050225,1.49332219284595,1.42888107384922,1.73826488917283,0.77163688185482,2.06042950401653,1.17759136107518,1.37147700954166,0.354951612318675,1.1921809497366,1.88950341622027,1.2234219453993,1.09998990259179,0.182927972872773,1.05227884575137,1.7654534799962,0,0.949080144993393,0.886540341380071,0,1.08455788830176,0.771626443924566,0.749431733813838,1.40358965067245,0.429742108096597,0.382576664137687,0.220591419119515,2.31867835620421
|short_description=p1@Zfyve28
}}
}}

Latest revision as of 23:26, 25 September 2015

Short description:p1@Zfyve28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zfyve28_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000114368, ENSMUST00000114369_5end
EntrezGene:Zfyve28
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zfyve28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.99
cerebellum, neonate N30.CNhs11135.1395-42I229.32
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D519.99
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G54.73
testis, neonate N00.CNhs11189.1300-22B76.57
testis, neonate N07.CNhs11222.726-26I44.17
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.19e-4775
central nervous system4.70e-4673
ectoderm-derived structure1.17e-4395
ectoderm1.17e-4395
presumptive ectoderm1.17e-4395
neurectoderm3.57e-3664
neural plate3.57e-3664
presumptive neural plate3.57e-3664
regional part of nervous system3.14e-3354
ecto-epithelium1.29e-3173
neural tube1.82e-3152
neural rod1.82e-3152
future spinal cord1.82e-3152
neural keel1.82e-3152
brain3.30e-2847
future brain3.30e-2847
regional part of brain3.08e-2746
pre-chordal neural plate1.79e-2549
gray matter2.13e-2434
anterior neural tube1.49e-2340
regional part of forebrain9.16e-2339
forebrain9.16e-2339
future forebrain9.16e-2339
brain grey matter2.22e-2129
regional part of telencephalon2.22e-2129
telencephalon2.22e-2129
structure with developmental contribution from neural crest2.06e-2092
cerebral cortex8.69e-1721
cerebral hemisphere8.69e-1721
pallium8.69e-1721
regional part of cerebral cortex1.87e-1417
occipital lobe6.21e-1110
visual cortex6.21e-1110
neocortex6.21e-1110
posterior neural tube3.32e-0812
chordal neural plate3.32e-0812
peripheral nervous system4.13e-0811
autonomic nervous system1.83e-079
tube2.06e-07114
anatomical conduit6.00e-07122
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