FFCP PHASE1:Mm9::chr11:93905456..93905470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70834 | |EntrezGene=70834 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NC72 | |UniProt=Q5NC72 | ||
|association_with_transcript=24bp_to_ENSMUST00000132079_5end | |association_with_transcript=24bp_to_ENSMUST00000132079_5end | ||
|cluster_id=chr11:93905456..93905470,+ | |||
|description=CAGE_peak_5_at_Spag9_5end | |description=CAGE_peak_5_at_Spag9_5end | ||
|id=chr11:93905456..93905470,+ | |id=chr11:93905456..93905470,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.33e-12!33;CL:0000047!1.33e-12!33;CL:0000031!1.33e-12!33;CL:0000404!1.33e-12!33;CL:0000117!6.13e-11!23;CL:0000337!6.13e-11!23;CL:0000393!6.20e-09!39;CL:0000211!6.20e-09!39;CL:0000221!1.72e-07!44;CL:0000133!1.72e-07!44;CL:0002319!4.43e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.40e-14,33;CL:0000047,4.40e-14,33;CL:0000031,4.40e-14,33;CL:0000404,4.40e-14,33;CL:0000117,9.76e-13,23;CL:0000337,9.76e-13,23;CL:0000393,5.82e-10,39;CL:0000211,5.82e-10,39;CL:0000221,1.95e-08,44;CL:0000133,1.95e-08,44;CL:0002319,5.91e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.59e-23!102;UBERON:0000924!3.59e-23!102;UBERON:0006601!3.59e-23!102;UBERON:0002346!3.60e-21!71;UBERON:0003075!3.60e-21!71;UBERON:0007284!3.60e-21!71;UBERON:0001017!7.06e-21!73;UBERON:0005743!7.06e-21!73;UBERON:0000033!9.36e-21!63;UBERON:0000073!1.82e-20!75;UBERON:0001016!1.82e-20!75;UBERON:0001049!1.30e-17!52;UBERON:0005068!1.30e-17!52;UBERON:0006241!1.30e-17!52;UBERON:0007135!1.30e-17!52;UBERON:0003056!3.27e-17!49;UBERON:0000955!4.54e-17!50;UBERON:0006238!4.54e-17!50;UBERON:0002616!2.09e-16!49;UBERON:0002020!4.16e-15!34;UBERON:0003080!7.70e-14!40;UBERON:0002780!3.10e-13!39;UBERON:0001890!3.10e-13!39;UBERON:0006240!3.10e-13!39;UBERON:0002791!1.50e-12!29;UBERON:0003528!1.50e-12!29;UBERON:0001893!1.50e-12!29;UBERON:0007811!2.28e-09!86;UBERON:0000153!2.90e-09!94;UBERON:0000468!4.22e-09!333;UBERON:0000956!5.10e-09!21;UBERON:0001869!5.10e-09!21;UBERON:0000203!5.10e-09!21;UBERON:0002021!6.44e-08!10;UBERON:0000411!6.44e-08!10;UBERON:0001950!6.44e-08!10;UBERON:0002619!1.92e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.66e-24,64;UBERON:0003075,2.66e-24,64;UBERON:0007284,2.66e-24,64;UBERON:0004121,9.15e-24,95;UBERON:0000924,9.15e-24,95;UBERON:0006601,9.15e-24,95;UBERON:0010371,2.29e-23,73;UBERON:0001017,4.56e-23,73;UBERON:0010314,9.74e-23,92;UBERON:0001016,9.65e-22,75;UBERON:0000073,5.94e-21,54;UBERON:0001049,2.94e-19,52;UBERON:0005068,2.94e-19,52;UBERON:0006241,2.94e-19,52;UBERON:0007135,2.94e-19,52;UBERON:0003056,3.75e-18,49;UBERON:0002020,6.38e-18,34;UBERON:0000955,3.04e-16,47;UBERON:0006238,3.04e-16,47;UBERON:0002616,1.68e-15,46;UBERON:0003528,7.27e-15,29;UBERON:0002791,7.27e-15,29;UBERON:0001893,7.27e-15,29;UBERON:0003080,3.30e-14,40;UBERON:0002780,1.62e-13,39;UBERON:0001890,1.62e-13,39;UBERON:0006240,1.62e-13,39;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0002021,3.87e-09,10;UBERON:0000411,3.87e-09,10;UBERON:0001950,3.87e-09,10;UBERON:0002619,8.95e-09,17 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,4.04632921719196,3.1739458756322,1.90149421051854,0,0,0,0.988866362566974,0.7104801149461,0,0.768436610643109,2.7996195323289,3.24014251996058,3.15487442027073,2.85650984403804,4.63823935998388,4.77714116938321,3.1629005436018,1.83843757322004,23.1243350098716,15.1947932321373,14.4390141260869,3.56092976871523,2.56165402086747,2.6045668527838,5.02529398202486,11.2552522006336,9.0150966188318,11.490514833473,11.8168495063255,5.96478226640962,0.908714319998209,0.529000920747499,0.289864488701678,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,5.7745802108439,0,0,0,0,0,0,0.22836775943812,0,1.92974780784272,1.38788261412909,0.913396434936424,0.691846491768175,0.904335843315735,1.41106448562846,0.502666365318702,0,1.15679485535929,0.884610551949874,1.7794353494215,1.98757366614354,0,0,10.8328894894272,8.58731497935166,0,0,0,0.127070227073065,11.833460512981,7.32000964509802,3.76963056338593,12.5153510538439,10.9957646652042,12.259494629014,11.0324058886075,1.73126918545538,0.870848794270651,0.505445516867349,1.68353484709179,2.99277018814219,2.75882525320168,2.88099407688559,3.46621081022145,3.94611695077702,4.35586648968489,3.65436725782942,3.3631438196072,0.215567992932842,0.945530400839096,1.93546236580344,1.09597866213787,1.66828349535359,1.74126083261083,1.23469281844766,0.995171334092466,0,0,0,0.828503090142008,0.938104239924385,1.62055855314913,1.42046841351126,1.96764231747404,2.1597395804233,1.62773761325285,1.60964040839772,3.38619492864792,1.15191894939436,3.2833492815819,3.40489000092594,2.92399974850665,1.97595103761946,2.68412837520744,9.67333763394985,2.57261530948211,0.330418782983798,0,0.426576501070468,2.55460339046482,1.15980715189884,0.403367049246685,1.11189021922435,0.760902504450237,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.913988100877831,2.25415471346161,0.814605311381257,0.775809948670503,1.33258057791605,0.569128834118316,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.739012760666419,0.37898282354097,0.325929952884052,0.848725428875941,1.17345124144251,0.670025029767263,1.42826184531608,0.195133647857799,0.945810864637146,0.8858587585951,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,12.2018448390722,13.244920584919,0,1.26235463602186,1.26203287766503,1.95219372148319,4.30846795465598,0.955875191810208,3.34198011123591,1.69845918473299,3.23848561339915,2.33804686329049,3.16230222357219,13.4954952897159,2.12910127812403,0.890328018336276,1.30309567482861,2.3095817216155,0,1.45668381692989,0.302323556964751,1.50884063804718,0.295301892880773,0.614870295887855,1.29214146584111,0.363533729477506,0.356497378384721,0.632073515871632,0,0,4.08527526904546,0.900305470156551,1.03486947026204,0.857348140126369,2.12808280370728,0.891844088010353,0.987294123612726,1.2178597964584,0.469343416127421,0.21183207086382,0.220528398054962,0.65954501176592,2.42196640043858,1.14594557363496,1.90995750405018,1.14898629821543,0,12.0526446306831,0,1.65109494370578,0.740778109478847,0.188368457004691,0,0,0,0.139951452323658,0,0,1.42351197111511,0.813277868507395,1.29606408986162,1.04544148007234,0.87345025498471,0.404593039154462,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,3.13984746692355,2.31641886639937,3.30567020184881,1.93739735216597,4.73077151374179,5.8678619322877,5.4685841634459,9.22762230946256,0.966336483304024,1.44015003128933,0.316011120628178,0.202725215290164,0.821687657318618,0.77952493786677,0,0.79472541912506,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.194915761479505,0,0.233753804363138,0.906921534460845,0,0,0,0.386379188064381,0,0.915758121336325,0.428736758158132,0,11.8597886949584,14.7304075682297,15.4681788628637,10.1393377582776,10.9613203163303,15.107877947794,9.45031500324528,15.7612421128477,18.1256963593682,14.497288729051,1.45302286617847,5.98537310101547,3.07320490357441,2.43106717068294,1.04806581313991,0.919217542250071,2.22246727801615,3.29656091582231,2.24643446714271,2.27427490587418,3.04175159868288,3.39527414494937,1.40462261204824,1.60062881012173,2.46972516509137,0.952587382566147,1.85414921511769,1.54327376370964,2.06042950401653,2.79677948255355,0.342869252385415,2.30718548007139,2.62279808942053,2.90692833264657,2.07040636913727,1.94613598150856,1.28049581010941,1.57841826862706,1.22223702461276,5.05028044491965,1.42362021749009,2.06859412988683,3.27384834535751,2.01417893541756,1.73615949883027,1.49886346762768,1.87145286756327,3.22306581072447,3.44318997723918,1.98532277207564,4.86922454802885 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| ||
|short_description=p5@Spag9 | |short_description=p5@Spag9 | ||
}} | }} |
Latest revision as of 23:32, 25 September 2015
Short description: | p5@Spag9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Spag9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 24bp_to_ENSMUST00000132079_5end |
EntrezGene: | Spag9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.40e-14 | 33 |
neuronal stem cell | 4.40e-14 | 33 |
neuroblast | 4.40e-14 | 33 |
electrically signaling cell | 4.40e-14 | 33 |
CNS neuron (sensu Vertebrata) | 9.76e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.76e-13 | 23 |
electrically responsive cell | 5.82e-10 | 39 |
electrically active cell | 5.82e-10 | 39 |
ectodermal cell | 1.95e-08 | 44 |
neurectodermal cell | 1.95e-08 | 44 |
neural cell | 5.91e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.66e-24 | 64 |
neural plate | 2.66e-24 | 64 |
presumptive neural plate | 2.66e-24 | 64 |
ectoderm-derived structure | 9.15e-24 | 95 |
ectoderm | 9.15e-24 | 95 |
presumptive ectoderm | 9.15e-24 | 95 |
ecto-epithelium | 2.29e-23 | 73 |
central nervous system | 4.56e-23 | 73 |
structure with developmental contribution from neural crest | 9.74e-23 | 92 |
nervous system | 9.65e-22 | 75 |
regional part of nervous system | 5.94e-21 | 54 |
neural tube | 2.94e-19 | 52 |
neural rod | 2.94e-19 | 52 |
future spinal cord | 2.94e-19 | 52 |
neural keel | 2.94e-19 | 52 |
pre-chordal neural plate | 3.75e-18 | 49 |
gray matter | 6.38e-18 | 34 |
brain | 3.04e-16 | 47 |
future brain | 3.04e-16 | 47 |
regional part of brain | 1.68e-15 | 46 |
brain grey matter | 7.27e-15 | 29 |
regional part of telencephalon | 7.27e-15 | 29 |
telencephalon | 7.27e-15 | 29 |
anterior neural tube | 3.30e-14 | 40 |
regional part of forebrain | 1.62e-13 | 39 |
forebrain | 1.62e-13 | 39 |
future forebrain | 1.62e-13 | 39 |
cerebral cortex | 1.19e-10 | 21 |
cerebral hemisphere | 1.19e-10 | 21 |
pallium | 1.19e-10 | 21 |
occipital lobe | 3.87e-09 | 10 |
visual cortex | 3.87e-09 | 10 |
neocortex | 3.87e-09 | 10 |
regional part of cerebral cortex | 8.95e-09 | 17 |