FFCP PHASE1:Mm9::chr10:49503296..49503388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14806 | |EntrezGene=14806 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=P39087 | |UniProt=P39087 | ||
|association_with_transcript=-81bp_to_ENSMUST00000105485_5end | |association_with_transcript=-81bp_to_ENSMUST00000105485_5end | ||
|cluster_id=chr10:49503296..49503388,- | |||
|description=CAGE_peak_3_at_Grik2_5end | |description=CAGE_peak_3_at_Grik2_5end | ||
|id=chr10:49503296..49503388,- | |id=chr10:49503296..49503388,- | ||
|ontology_enrichment_celltype=CL:0000540!3.62e-12!33;CL:0000047!3.62e-12!33;CL:0000031!3.62e-12!33;CL:0000404!3.62e-12!33;CL:0000393!2.99e-09!39;CL:0000211!2.99e-09!39;CL:0000221!4.83e-08!44;CL:0000133!4.83e-08!44;CL:0002319!1.09e-07!43;CL:0000107!1.62e-07!9 | |ontology_enrichment_celltype=CL:0000540!3.62e-12!33;CL:0000047!3.62e-12!33;CL:0000031!3.62e-12!33;CL:0000404!3.62e-12!33;CL:0000393!2.99e-09!39;CL:0000211!2.99e-09!39;CL:0000221!4.83e-08!44;CL:0000133!4.83e-08!44;CL:0002319!1.09e-07!43;CL:0000107!1.62e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.60e-14,33;CL:0000047,6.60e-14,33;CL:0000031,6.60e-14,33;CL:0000404,6.60e-14,33;CL:0000221,2.11e-10,44;CL:0000133,2.11e-10,44;CL:0000393,3.54e-10,39;CL:0000211,3.54e-10,39;CL:0002319,6.27e-10,43;CL:0000107,1.56e-09,9;CL:0000117,7.62e-07,23;CL:0000337,7.62e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.16e-22!75;UBERON:0001016!6.16e-22!75;UBERON:0004121!1.27e-21!102;UBERON:0000924!1.27e-21!102;UBERON:0006601!1.27e-21!102;UBERON:0001017!3.24e-21!73;UBERON:0005743!3.24e-21!73;UBERON:0002346!9.64e-20!71;UBERON:0003075!9.64e-20!71;UBERON:0007284!9.64e-20!71;UBERON:0000033!2.21e-18!63;UBERON:0003056!2.87e-15!49;UBERON:0000955!3.31e-15!50;UBERON:0006238!3.31e-15!50;UBERON:0001049!1.03e-14!52;UBERON:0005068!1.03e-14!52;UBERON:0006241!1.03e-14!52;UBERON:0007135!1.03e-14!52;UBERON:0002616!1.37e-14!49;UBERON:0003080!8.46e-12!40;UBERON:0002780!3.60e-11!39;UBERON:0001890!3.60e-11!39;UBERON:0006240!3.60e-11!39;UBERON:0002020!6.03e-10!34;UBERON:0002791!8.06e-09!29;UBERON:0003528!8.06e-09!29;UBERON:0001893!8.06e-09!29;UBERON:0000468!1.87e-08!333;UBERON:0000010!6.61e-08!11;UBERON:0002410!1.62e-07!9;UBERON:0000025!5.01e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!6.16e-22!75;UBERON:0001016!6.16e-22!75;UBERON:0004121!1.27e-21!102;UBERON:0000924!1.27e-21!102;UBERON:0006601!1.27e-21!102;UBERON:0001017!3.24e-21!73;UBERON:0005743!3.24e-21!73;UBERON:0002346!9.64e-20!71;UBERON:0003075!9.64e-20!71;UBERON:0007284!9.64e-20!71;UBERON:0000033!2.21e-18!63;UBERON:0003056!2.87e-15!49;UBERON:0000955!3.31e-15!50;UBERON:0006238!3.31e-15!50;UBERON:0001049!1.03e-14!52;UBERON:0005068!1.03e-14!52;UBERON:0006241!1.03e-14!52;UBERON:0007135!1.03e-14!52;UBERON:0002616!1.37e-14!49;UBERON:0003080!8.46e-12!40;UBERON:0002780!3.60e-11!39;UBERON:0001890!3.60e-11!39;UBERON:0006240!3.60e-11!39;UBERON:0002020!6.03e-10!34;UBERON:0002791!8.06e-09!29;UBERON:0003528!8.06e-09!29;UBERON:0001893!8.06e-09!29;UBERON:0000468!1.87e-08!333;UBERON:0000010!6.61e-08!11;UBERON:0002410!1.62e-07!9;UBERON:0000025!5.01e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.28e-27,75;UBERON:0004121,9.34e-27,95;UBERON:0000924,9.34e-27,95;UBERON:0006601,9.34e-27,95;UBERON:0001017,2.05e-26,73;UBERON:0002346,2.34e-23,64;UBERON:0003075,2.34e-23,64;UBERON:0007284,2.34e-23,64;UBERON:0010371,7.59e-20,73;UBERON:0000073,7.51e-18,54;UBERON:0003056,1.25e-17,49;UBERON:0010314,4.42e-17,92;UBERON:0001049,2.13e-16,52;UBERON:0005068,2.13e-16,52;UBERON:0006241,2.13e-16,52;UBERON:0007135,2.13e-16,52;UBERON:0000955,5.39e-16,47;UBERON:0006238,5.39e-16,47;UBERON:0002616,3.19e-15,46;UBERON:0003080,1.78e-13,40;UBERON:0002780,1.14e-12,39;UBERON:0001890,1.14e-12,39;UBERON:0006240,1.14e-12,39;UBERON:0002020,2.27e-11,34;UBERON:0003528,4.95e-11,29;UBERON:0002791,4.95e-11,29;UBERON:0001893,4.95e-11,29;UBERON:0000010,4.71e-10,11;UBERON:0002410,1.56e-09,9;UBERON:0002021,2.93e-08,10;UBERON:0000411,2.93e-08,10;UBERON:0001950,2.93e-08,10;UBERON:0002619,7.07e-07,17 | |||
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| ||
|short_description=p3@Grik2 | |short_description=p3@Grik2 | ||
}} | }} |
Latest revision as of 01:30, 26 September 2015
Short description: | p3@Grik2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grik2_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | -81bp_to_ENSMUST00000105485_5end |
EntrezGene: | Grik2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.60e-14 | 33 |
neuronal stem cell | 6.60e-14 | 33 |
neuroblast | 6.60e-14 | 33 |
electrically signaling cell | 6.60e-14 | 33 |
ectodermal cell | 2.11e-10 | 44 |
neurectodermal cell | 2.11e-10 | 44 |
electrically responsive cell | 3.54e-10 | 39 |
electrically active cell | 3.54e-10 | 39 |
neural cell | 6.27e-10 | 43 |
autonomic neuron | 1.56e-09 | 9 |
CNS neuron (sensu Vertebrata) | 7.62e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.62e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.28e-27 | 75 |
ectoderm-derived structure | 9.34e-27 | 95 |
ectoderm | 9.34e-27 | 95 |
presumptive ectoderm | 9.34e-27 | 95 |
central nervous system | 2.05e-26 | 73 |
neurectoderm | 2.34e-23 | 64 |
neural plate | 2.34e-23 | 64 |
presumptive neural plate | 2.34e-23 | 64 |
ecto-epithelium | 7.59e-20 | 73 |
regional part of nervous system | 7.51e-18 | 54 |
pre-chordal neural plate | 1.25e-17 | 49 |
structure with developmental contribution from neural crest | 4.42e-17 | 92 |
neural tube | 2.13e-16 | 52 |
neural rod | 2.13e-16 | 52 |
future spinal cord | 2.13e-16 | 52 |
neural keel | 2.13e-16 | 52 |
brain | 5.39e-16 | 47 |
future brain | 5.39e-16 | 47 |
regional part of brain | 3.19e-15 | 46 |
anterior neural tube | 1.78e-13 | 40 |
regional part of forebrain | 1.14e-12 | 39 |
forebrain | 1.14e-12 | 39 |
future forebrain | 1.14e-12 | 39 |
gray matter | 2.27e-11 | 34 |
brain grey matter | 4.95e-11 | 29 |
regional part of telencephalon | 4.95e-11 | 29 |
telencephalon | 4.95e-11 | 29 |
peripheral nervous system | 4.71e-10 | 11 |
autonomic nervous system | 1.56e-09 | 9 |
occipital lobe | 2.93e-08 | 10 |
visual cortex | 2.93e-08 | 10 |
neocortex | 2.93e-08 | 10 |
regional part of cerebral cortex | 7.07e-07 | 17 |