FFCP PHASE1:Mm9::chr10:59569018..59569040,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=94214|HGNC=|MCL_coexpression_id=1|UniProt=Q9ER58|association_with_transcript=13bp_to_NM_052994,uc007fek.1,uc007fel.1_5end|description=CAGE_peak_3_at_Spock2_5end|id=chr10:59569018..59569040,+|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000540!1.48e-09!33;CL:0000047!1.48e-09!33;CL:0000031!1.48e-09!33;CL:0000404!1.48e-09!33;CL:0000393!8.76e-07!39;CL:0000211!8.76e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-13,23;CL:0000337,1.59e-13,23;CL:0000540,1.31e-09,33;CL:0000047,1.31e-09,33;CL:0000031,1.31e-09,33;CL:0000404,1.31e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.82e-21!71;UBERON:0003075!4.82e-21!71;UBERON:0007284!4.82e-21!71;UBERON:0001049!1.19e-20!52;UBERON:0005068!1.19e-20!52;UBERON:0006241!1.19e-20!52;UBERON:0007135!1.19e-20!52;UBERON:0000955!6.54e-20!50;UBERON:0006238!6.54e-20!50;UBERON:0000033!2.41e-19!63;UBERON:0002616!2.41e-19!49;UBERON:0000073!3.48e-19!75;UBERON:0001016!3.48e-19!75;UBERON:0001017!3.98e-19!73;UBERON:0005743!3.98e-19!73;UBERON:0004121!6.43e-17!102;UBERON:0000924!6.43e-17!102;UBERON:0006601!6.43e-17!102;UBERON:0003056!2.49e-16!49;UBERON:0003080!5.09e-16!40;UBERON:0002020!5.87e-16!34;UBERON:0002780!2.00e-15!39;UBERON:0001890!2.00e-15!39;UBERON:0006240!2.00e-15!39;UBERON:0002791!3.24e-13!29;UBERON:0003528!3.24e-13!29;UBERON:0001893!3.24e-13!29;UBERON:0007811!3.50e-12!86;UBERON:0000153!7.91e-10!94;UBERON:0000956!6.78e-09!21;UBERON:0001869!6.78e-09!21;UBERON:0000203!6.78e-09!21;UBERON:0002021!7.82e-08!10;UBERON:0000411!7.82e-08!10;UBERON:0001950!7.82e-08!10;UBERON:0004111!8.90e-08!122;UBERON:0002619!1.50e-07!17;UBERON:0000025!1.88e-07!114;UBERON:0000468!2.16e-07!333;UBERON:0000479!9.32e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.71e-24,54;UBERON:0001049,2.74e-22,52;UBERON:0005068,2.74e-22,52;UBERON:0006241,2.74e-22,52;UBERON:0007135,2.74e-22,52;UBERON:0002346,4.56e-21,64;UBERON:0003075,4.56e-21,64;UBERON:0007284,4.56e-21,64;UBERON:0001017,1.81e-20,73;UBERON:0001016,4.04e-20,75;UBERON:0000955,4.15e-19,47;UBERON:0006238,4.15e-19,47;UBERON:0002616,1.66e-18,46;UBERON:0002020,2.27e-17,34;UBERON:0003080,5.24e-17,40;UBERON:0003056,6.50e-17,49;UBERON:0010371,1.71e-16,73;UBERON:0004121,2.01e-16,95;UBERON:0000924,2.01e-16,95;UBERON:0006601,2.01e-16,95;UBERON:0002780,2.31e-16,39;UBERON:0001890,2.31e-16,39;UBERON:0006240,2.31e-16,39;UBERON:0003528,2.23e-14,29;UBERON:0002791,2.23e-14,29;UBERON:0001893,2.23e-14,29;UBERON:0010314,3.68e-13,92;UBERON:0000956,1.16e-09,21;UBERON:0001869,1.16e-09,21;UBERON:0000203,1.16e-09,21;UBERON:0002021,2.13e-08,10;UBERON:0000411,2.13e-08,10;UBERON:0001950,2.13e-08,10;UBERON:0002619,3.38e-08,17;UBERON:0004111,1.58e-07,122;UBERON:0000025,1.86e-07,114|phase1_expression=2.40223270657191,0.348975407639361,0,0,0,0,0.700837921786577,1.03298658753261,0.140788722151667,0.468129052643987,0,0,0,0.174840804837995,0,0,0.699561878128147,0,0,0,17.4338744809693,0.397163804803541,0.261199789138935,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0.573066879877513,1.54701627683233,24.6826082248709,40.7323054039465,22.8179305262225,0,0,0,0,0,0,0,3.7328260431052,9.58542162155004,7.36137364729837,59.1297537715873,63.6101397940647,8.94182834269164,9.58454710182364,11.0306254393203,157.465709829126,106.491239963047,104.913262214014,27.6961204233407,28.9100953783615,26.045668527838,103.576892629512,77.0984775743402,95.3461066127295,67.4699460734699,49.9724599604851,29.8239113320481,0.908714319998209,4.98772296704784,2.89864488701678,0,0,1.07940638327563,0,0,4.49422144421606,0,0,0,1.12674735821344,0,0,0,0,0,0,2.62622923353838,0,4.89859058913922,1.04091196059682,3.34912026143355,2.7673859670727,1.80867168663147,5.87943535678524,3.14166478324189,2.47194967734374,7.08536848907567,0,0.161766849947409,0.220841518460394,0,3.72783522436244,63.8262137485173,66.1851593530518,1.02182822083437,0,0,0,72.1990881931245,64.0500843946077,21.3612398591869,73.0062144807561,75.6917753697778,93.9201961409212,86.4745932151148,3.7680564624617,2.86136032403214,2.52722758433675,3.78795340595653,1.17108398666433,0.919608417733892,2.52086981727489,2.71268672104287,3.94611695077702,2.94661556655154,3.93547243150861,16.039608985819,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,2.089512999133,0.61734640922383,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0.804820204198858,1.28441876603886,0.822799249567402,0.492502392237286,0.972825714550269,1.16959989940266,1.53685080703735,2.14730270016595,57.4091559580067,16.4647379806855,0,0.793351699990633,0,0.232236671860439,0.257734922644187,1.4117846723634,0.444756087689741,0.760902504450237,2.37264530772256,1.97638745668813,1.25667604400135,0.994782360205754,1.16978452271472,0,0.864552199498777,0.597423819763102,4.1726938209678,5.1411830674378,5.63538678365402,5.09128319613286,6.0125271021964,4.48869247298039,0.252946148497029,0.295220295959204,0.156998727841375,0.123397163921801,0.889357881261447,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,1.11642284300551,0,1.01031551178845,0.358794827043824,0.482443521363367,35.6573657021547,0.189491411770485,0.325929952884052,0.339490171550376,0.704070744865506,1.17254380209271,5.47500374037832,16.3912264200551,19.3891227250615,25.0255099303116,25.5127629851979,29.3315333341171,33.8462564457155,39.1998948755896,0,0,0,1.10374698521893,78.6697890940181,76.8908664044853,0,1.51482556322624,0.94652465824877,1.17131623288992,1.50796378412959,0.238968797952552,0.222798674082394,2.54768877709949,2.42886421004937,1.16902343164525,1.58115111178609,48.1981974632711,3.26462195979018,1.24645922567079,4.23506094319298,12.7026994688852,0,0.728341908464944,1.209294227859,0.754420319023592,2.06711325016541,2.45948118355142,2.32585463851399,2.18120237686503,1.06949213515416,3.16036757935816,2.10837217149998,1.03135543248187,17.0219802876894,0.720244376125241,1.03486947026204,2.57204442037911,4.07882537377229,8.91844088010353,10.3665882979336,18.8768268451052,0.469343416127421,0,2.42581237860458,0.16488625294148,0.645857706783622,0,0,0,1.45740418314925,71.5741665760567,0.512612642393558,1.23832120777933,0.370389054739423,0,0.546776910884101,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0.627264888043406,1.31017538247707,1.75323650300267,1.73572257023205,1.83229159388821,0.777689839750757,1.24267862617385,2.25477175473676,1.04661582230785,1.32366792365678,4.083474955225,6.07051170345336,4.56181538825101,11.1489376713466,14.9735042570543,30.1994911946047,9.42178071221424,4.32045009386798,1.58005560314089,4.66267995167378,4.00572732942826,3.37794139742267,2.32734704367726,1.19208812868759,1.44234539423963,0.886137163047463,0.706765149637033,1.21930890648,0.302478555410522,0.682205165178267,0.673482891482306,0.584384510907845,0.453460767230423,0,0,0,6.37525660306228,5.44279178808428,3.47988086107804,0.643105137237198,5.01572104035363,89.2307911334965,82.8585425712918,81.3511629083943,84.723618895438,89.0607275701835,99.7119944554405,93.1531050319892,81.0578165803597,72.9559278464569,81.8061292567875,0.415149390336707,2.79317411380722,2.90247129782028,1.94485373654635,2.09613162627982,2.02227859295016,4.88942801163553,2.67845574410562,5.77654577265267,5.05394423527595,4.05566879824384,4.33840585187975,3.09016974650612,4.03358460150676,3.79074095107048,5.23923060411381,3.59241410429052,3.08654752741928,2.47251540481984,4.41596760403192,2.40008476669791,3.37204031702741,4.5302876089991,2.90692833264657,3.95259397744389,4.14611578669215,3.29270351170991,3.41990624869196,3.93831930152999,6.17256498823512,3.08451047122853,3.44765688314472,3.27384834535751,3.40861050609125,1.92906610981141,7.99393849401427,3.97683734357194,5.15690529715916,4.20834330551455,2.42650561031467,2.55054619182464|short_description=p3@Spock2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94214 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ER58 | |||
|association_with_transcript=13bp_to_NM_052994,uc007fek.1,uc007fel.1_5end | |||
|cluster_id=chr10:59569018..59569040,+ | |||
|description=CAGE_peak_3_at_Spock2_5end | |||
|id=chr10:59569018..59569040,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000540!1.48e-09!33;CL:0000047!1.48e-09!33;CL:0000031!1.48e-09!33;CL:0000404!1.48e-09!33;CL:0000393!8.76e-07!39;CL:0000211!8.76e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-13,23;CL:0000337,1.59e-13,23;CL:0000540,1.31e-09,33;CL:0000047,1.31e-09,33;CL:0000031,1.31e-09,33;CL:0000404,1.31e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.82e-21!71;UBERON:0003075!4.82e-21!71;UBERON:0007284!4.82e-21!71;UBERON:0001049!1.19e-20!52;UBERON:0005068!1.19e-20!52;UBERON:0006241!1.19e-20!52;UBERON:0007135!1.19e-20!52;UBERON:0000955!6.54e-20!50;UBERON:0006238!6.54e-20!50;UBERON:0000033!2.41e-19!63;UBERON:0002616!2.41e-19!49;UBERON:0000073!3.48e-19!75;UBERON:0001016!3.48e-19!75;UBERON:0001017!3.98e-19!73;UBERON:0005743!3.98e-19!73;UBERON:0004121!6.43e-17!102;UBERON:0000924!6.43e-17!102;UBERON:0006601!6.43e-17!102;UBERON:0003056!2.49e-16!49;UBERON:0003080!5.09e-16!40;UBERON:0002020!5.87e-16!34;UBERON:0002780!2.00e-15!39;UBERON:0001890!2.00e-15!39;UBERON:0006240!2.00e-15!39;UBERON:0002791!3.24e-13!29;UBERON:0003528!3.24e-13!29;UBERON:0001893!3.24e-13!29;UBERON:0007811!3.50e-12!86;UBERON:0000153!7.91e-10!94;UBERON:0000956!6.78e-09!21;UBERON:0001869!6.78e-09!21;UBERON:0000203!6.78e-09!21;UBERON:0002021!7.82e-08!10;UBERON:0000411!7.82e-08!10;UBERON:0001950!7.82e-08!10;UBERON:0004111!8.90e-08!122;UBERON:0002619!1.50e-07!17;UBERON:0000025!1.88e-07!114;UBERON:0000468!2.16e-07!333;UBERON:0000479!9.32e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.71e-24,54;UBERON:0001049,2.74e-22,52;UBERON:0005068,2.74e-22,52;UBERON:0006241,2.74e-22,52;UBERON:0007135,2.74e-22,52;UBERON:0002346,4.56e-21,64;UBERON:0003075,4.56e-21,64;UBERON:0007284,4.56e-21,64;UBERON:0001017,1.81e-20,73;UBERON:0001016,4.04e-20,75;UBERON:0000955,4.15e-19,47;UBERON:0006238,4.15e-19,47;UBERON:0002616,1.66e-18,46;UBERON:0002020,2.27e-17,34;UBERON:0003080,5.24e-17,40;UBERON:0003056,6.50e-17,49;UBERON:0010371,1.71e-16,73;UBERON:0004121,2.01e-16,95;UBERON:0000924,2.01e-16,95;UBERON:0006601,2.01e-16,95;UBERON:0002780,2.31e-16,39;UBERON:0001890,2.31e-16,39;UBERON:0006240,2.31e-16,39;UBERON:0003528,2.23e-14,29;UBERON:0002791,2.23e-14,29;UBERON:0001893,2.23e-14,29;UBERON:0010314,3.68e-13,92;UBERON:0000956,1.16e-09,21;UBERON:0001869,1.16e-09,21;UBERON:0000203,1.16e-09,21;UBERON:0002021,2.13e-08,10;UBERON:0000411,2.13e-08,10;UBERON:0001950,2.13e-08,10;UBERON:0002619,3.38e-08,17;UBERON:0004111,1.58e-07,122;UBERON:0000025,1.86e-07,114 | |||
|phase1_expression=2.40223270657191,0.348975407639361,0,0,0,0,0.700837921786577,1.03298658753261,0.140788722151667,0.468129052643987,0,0,0,0.174840804837995,0,0,0.699561878128147,0,0,0,17.4338744809693,0.397163804803541,0.261199789138935,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0.573066879877513,1.54701627683233,24.6826082248709,40.7323054039465,22.8179305262225,0,0,0,0,0,0,0,3.7328260431052,9.58542162155004,7.36137364729837,59.1297537715873,63.6101397940647,8.94182834269164,9.58454710182364,11.0306254393203,157.465709829126,106.491239963047,104.913262214014,27.6961204233407,28.9100953783615,26.045668527838,103.576892629512,77.0984775743402,95.3461066127295,67.4699460734699,49.9724599604851,29.8239113320481,0.908714319998209,4.98772296704784,2.89864488701678,0,0,1.07940638327563,0,0,4.49422144421606,0,0,0,1.12674735821344,0,0,0,0,0,0,2.62622923353838,0,4.89859058913922,1.04091196059682,3.34912026143355,2.7673859670727,1.80867168663147,5.87943535678524,3.14166478324189,2.47194967734374,7.08536848907567,0,0.161766849947409,0.220841518460394,0,3.72783522436244,63.8262137485173,66.1851593530518,1.02182822083437,0,0,0,72.1990881931245,64.0500843946077,21.3612398591869,73.0062144807561,75.6917753697778,93.9201961409212,86.4745932151148,3.7680564624617,2.86136032403214,2.52722758433675,3.78795340595653,1.17108398666433,0.919608417733892,2.52086981727489,2.71268672104287,3.94611695077702,2.94661556655154,3.93547243150861,16.039608985819,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,2.089512999133,0.61734640922383,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0.804820204198858,1.28441876603886,0.822799249567402,0.492502392237286,0.972825714550269,1.16959989940266,1.53685080703735,2.14730270016595,57.4091559580067,16.4647379806855,0,0.793351699990633,0,0.232236671860439,0.257734922644187,1.4117846723634,0.444756087689741,0.760902504450237,2.37264530772256,1.97638745668813,1.25667604400135,0.994782360205754,1.16978452271472,0,0.864552199498777,0.597423819763102,4.1726938209678,5.1411830674378,5.63538678365402,5.09128319613286,6.0125271021964,4.48869247298039,0.252946148497029,0.295220295959204,0.156998727841375,0.123397163921801,0.889357881261447,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,1.11642284300551,0,1.01031551178845,0.358794827043824,0.482443521363367,35.6573657021547,0.189491411770485,0.325929952884052,0.339490171550376,0.704070744865506,1.17254380209271,5.47500374037832,16.3912264200551,19.3891227250615,25.0255099303116,25.5127629851979,29.3315333341171,33.8462564457155,39.1998948755896,0,0,0,1.10374698521893,78.6697890940181,76.8908664044853,0,1.51482556322624,0.94652465824877,1.17131623288992,1.50796378412959,0.238968797952552,0.222798674082394,2.54768877709949,2.42886421004937,1.16902343164525,1.58115111178609,48.1981974632711,3.26462195979018,1.24645922567079,4.23506094319298,12.7026994688852,0,0.728341908464944,1.209294227859,0.754420319023592,2.06711325016541,2.45948118355142,2.32585463851399,2.18120237686503,1.06949213515416,3.16036757935816,2.10837217149998,1.03135543248187,17.0219802876894,0.720244376125241,1.03486947026204,2.57204442037911,4.07882537377229,8.91844088010353,10.3665882979336,18.8768268451052,0.469343416127421,0,2.42581237860458,0.16488625294148,0.645857706783622,0,0,0,1.45740418314925,71.5741665760567,0.512612642393558,1.23832120777933,0.370389054739423,0,0.546776910884101,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0.627264888043406,1.31017538247707,1.75323650300267,1.73572257023205,1.83229159388821,0.777689839750757,1.24267862617385,2.25477175473676,1.04661582230785,1.32366792365678,4.083474955225,6.07051170345336,4.56181538825101,11.1489376713466,14.9735042570543,30.1994911946047,9.42178071221424,4.32045009386798,1.58005560314089,4.66267995167378,4.00572732942826,3.37794139742267,2.32734704367726,1.19208812868759,1.44234539423963,0.886137163047463,0.706765149637033,1.21930890648,0.302478555410522,0.682205165178267,0.673482891482306,0.584384510907845,0.453460767230423,0,0,0,6.37525660306228,5.44279178808428,3.47988086107804,0.643105137237198,5.01572104035363,89.2307911334965,82.8585425712918,81.3511629083943,84.723618895438,89.0607275701835,99.7119944554405,93.1531050319892,81.0578165803597,72.9559278464569,81.8061292567875,0.415149390336707,2.79317411380722,2.90247129782028,1.94485373654635,2.09613162627982,2.02227859295016,4.88942801163553,2.67845574410562,5.77654577265267,5.05394423527595,4.05566879824384,4.33840585187975,3.09016974650612,4.03358460150676,3.79074095107048,5.23923060411381,3.59241410429052,3.08654752741928,2.47251540481984,4.41596760403192,2.40008476669791,3.37204031702741,4.5302876089991,2.90692833264657,3.95259397744389,4.14611578669215,3.29270351170991,3.41990624869196,3.93831930152999,6.17256498823512,3.08451047122853,3.44765688314472,3.27384834535751,3.40861050609125,1.92906610981141,7.99393849401427,3.97683734357194,5.15690529715916,4.20834330551455,2.42650561031467,2.55054619182464 | |||
|short_description=p3@Spock2 | |||
}} |
Latest revision as of 03:06, 26 September 2015
Short description: | p3@Spock2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Spock2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 13bp_to_NM_052994, uc007fek.1, uc007fel.1_5end |
EntrezGene: | Spock2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.59e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-13 | 23 |
neuron | 1.31e-09 | 33 |
neuronal stem cell | 1.31e-09 | 33 |
neuroblast | 1.31e-09 | 33 |
electrically signaling cell | 1.31e-09 | 33 |