FFCP PHASE1:Mm9::chr17:28712670..28712688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=328789 | |EntrezGene=328789 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=47 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q8H7,Q4KL25,B2RWL4 | |UniProt=E9Q8H7,Q4KL25,B2RWL4 | ||
|association_with_transcript=6bp_to_ENSMUST00000163218,NM_026571,uc008brg.2,uc012aoh.1_5end | |association_with_transcript=6bp_to_ENSMUST00000163218,NM_026571,uc008brg.2,uc012aoh.1_5end | ||
|cluster_id=chr17:28712670..28712688,+ | |||
|description=CAGE_peak_2_at_Lhfpl5_5end | |description=CAGE_peak_2_at_Lhfpl5_5end | ||
|id=chr17:28712670..28712688,+ | |id=chr17:28712670..28712688,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.18e-18!33;CL:0000047!1.18e-18!33;CL:0000031!1.18e-18!33;CL:0000404!1.18e-18!33;CL:0000117!1.02e-16!23;CL:0000337!1.02e-16!23;CL:0000221!1.44e-14!44;CL:0000133!1.44e-14!44;CL:0000393!4.41e-14!39;CL:0000211!4.41e-14!39;CL:0002319!1.08e-13!43;CL:0000055!2.92e-10!50 | |ontology_enrichment_celltype=CL:0000540!1.18e-18!33;CL:0000047!1.18e-18!33;CL:0000031!1.18e-18!33;CL:0000404!1.18e-18!33;CL:0000117!1.02e-16!23;CL:0000337!1.02e-16!23;CL:0000221!1.44e-14!44;CL:0000133!1.44e-14!44;CL:0000393!4.41e-14!39;CL:0000211!4.41e-14!39;CL:0002319!1.08e-13!43;CL:0000055!2.92e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.14e-17,33;CL:0000047,1.14e-17,33;CL:0000031,1.14e-17,33;CL:0000404,1.14e-17,33;CL:0000117,7.55e-17,23;CL:0000337,7.55e-17,23;CL:0000221,1.58e-14,44;CL:0000133,1.58e-14,44;CL:0000393,1.81e-14,39;CL:0000211,1.81e-14,39;CL:0002319,7.86e-13,43;CL:0002614,1.10e-10,3;CL:0002610,2.37e-09,3;CL:0002321,6.84e-08,70;CL:0000197,6.89e-08,2;CL:0002491,6.89e-08,2;CL:0000098,6.89e-08,2;CL:0002611,2.55e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.16e-29!102;UBERON:0000924!7.16e-29!102;UBERON:0006601!7.16e-29!102;UBERON:0000073!2.19e-27!75;UBERON:0001016!2.19e-27!75;UBERON:0002346!9.87e-27!71;UBERON:0003075!9.87e-27!71;UBERON:0007284!9.87e-27!71;UBERON:0001017!2.12e-26!73;UBERON:0005743!2.12e-26!73;UBERON:0001049!1.55e-20!52;UBERON:0005068!1.55e-20!52;UBERON:0006241!1.55e-20!52;UBERON:0007135!1.55e-20!52;UBERON:0000033!7.33e-20!63;UBERON:0000955!2.17e-18!50;UBERON:0006238!2.17e-18!50;UBERON:0002616!7.11e-18!49;UBERON:0003056!1.45e-14!49;UBERON:0003080!7.99e-14!40;UBERON:0002780!4.99e-13!39;UBERON:0001890!4.99e-13!39;UBERON:0006240!4.99e-13!39;UBERON:0002020!6.56e-12!34;UBERON:0007811!2.33e-10!86;UBERON:0000153!2.80e-08!94;UBERON:0002791!3.85e-08!29;UBERON:0003528!3.85e-08!29;UBERON:0001893!3.85e-08!29;UBERON:0002420!1.14e-07!8;UBERON:0007245!1.14e-07!8;UBERON:0010009!1.14e-07!8;UBERON:0010011!1.14e-07!8;UBERON:0000454!1.14e-07!8;UBERON:0003076!1.15e-07!12;UBERON:0003057!1.15e-07!12;UBERON:0002298!3.01e-07!6;UBERON:0002240!6.43e-07!6;UBERON:0005174!6.43e-07!6;UBERON:0001137!6.43e-07!6 | |ontology_enrichment_uberon=UBERON:0004121!7.16e-29!102;UBERON:0000924!7.16e-29!102;UBERON:0006601!7.16e-29!102;UBERON:0000073!2.19e-27!75;UBERON:0001016!2.19e-27!75;UBERON:0002346!9.87e-27!71;UBERON:0003075!9.87e-27!71;UBERON:0007284!9.87e-27!71;UBERON:0001017!2.12e-26!73;UBERON:0005743!2.12e-26!73;UBERON:0001049!1.55e-20!52;UBERON:0005068!1.55e-20!52;UBERON:0006241!1.55e-20!52;UBERON:0007135!1.55e-20!52;UBERON:0000033!7.33e-20!63;UBERON:0000955!2.17e-18!50;UBERON:0006238!2.17e-18!50;UBERON:0002616!7.11e-18!49;UBERON:0003056!1.45e-14!49;UBERON:0003080!7.99e-14!40;UBERON:0002780!4.99e-13!39;UBERON:0001890!4.99e-13!39;UBERON:0006240!4.99e-13!39;UBERON:0002020!6.56e-12!34;UBERON:0007811!2.33e-10!86;UBERON:0000153!2.80e-08!94;UBERON:0002791!3.85e-08!29;UBERON:0003528!3.85e-08!29;UBERON:0001893!3.85e-08!29;UBERON:0002420!1.14e-07!8;UBERON:0007245!1.14e-07!8;UBERON:0010009!1.14e-07!8;UBERON:0010011!1.14e-07!8;UBERON:0000454!1.14e-07!8;UBERON:0003076!1.15e-07!12;UBERON:0003057!1.15e-07!12;UBERON:0002298!3.01e-07!6;UBERON:0002240!6.43e-07!6;UBERON:0005174!6.43e-07!6;UBERON:0001137!6.43e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.07e-21,73;UBERON:0001016,1.04e-20,75;UBERON:0000073,8.10e-19,54;UBERON:0004121,5.56e-17,95;UBERON:0000924,5.56e-17,95;UBERON:0006601,5.56e-17,95;UBERON:0001049,1.22e-15,52;UBERON:0005068,1.22e-15,52;UBERON:0006241,1.22e-15,52;UBERON:0007135,1.22e-15,52;UBERON:0003076,2.96e-15,12;UBERON:0003057,2.96e-15,12;UBERON:0010371,1.33e-14,73;UBERON:0002346,1.71e-13,64;UBERON:0003075,1.71e-13,64;UBERON:0007284,1.71e-13,64;UBERON:0002950,2.37e-13,4;UBERON:0001891,2.37e-13,4;UBERON:0009616,2.37e-13,4;UBERON:0010286,2.37e-13,4;UBERON:0010314,2.96e-13,92;UBERON:0002240,7.02e-13,6;UBERON:0005174,7.02e-13,6;UBERON:0001137,7.02e-13,6;UBERON:0002038,1.10e-10,3;UBERON:0009663,1.10e-10,3;UBERON:0009661,1.10e-10,3;UBERON:0000125,1.10e-10,3;UBERON:0002308,1.10e-10,3;UBERON:0001948,2.25e-10,5;UBERON:0002315,2.25e-10,5;UBERON:0004684,2.37e-09,3;UBERON:0002275,2.37e-09,3;UBERON:0002616,8.61e-09,46;UBERON:0000955,1.51e-08,47;UBERON:0006238,1.51e-08,47;UBERON:0004766,6.89e-08,2;UBERON:0008193,6.89e-08,2;UBERON:0005913,6.89e-08,2;UBERON:0011158,6.89e-08,2;UBERON:0005744,6.89e-08,2;UBERON:0003457,6.89e-08,2;UBERON:0008001,6.89e-08,2;UBERON:0007497,6.89e-08,2;UBERON:0009955,6.89e-08,2;UBERON:0003067,6.89e-08,2;UBERON:0002546,6.89e-08,2;UBERON:0007914,6.89e-08,2;UBERON:0005253,6.89e-08,2;UBERON:0002227,6.89e-08,2;UBERON:0001846,6.89e-08,2;UBERON:0004339,6.89e-08,2;UBERON:0002105,6.89e-08,2;UBERON:0001678,6.89e-08,2;UBERON:0003128,6.89e-08,2;UBERON:0001694,6.89e-08,2;UBERON:0004681,6.89e-08,2;UBERON:0001839,6.89e-08,2;UBERON:0001690,6.89e-08,2;UBERON:0001844,6.89e-08,2;UBERON:0001849,6.89e-08,2;UBERON:0002499,6.89e-08,2;UBERON:0001855,6.89e-08,2;UBERON:0011137,6.89e-08,2;UBERON:0001703,6.89e-08,2;UBERON:0010323,6.89e-08,2;UBERON:0003129,6.89e-08,2;UBERON:0003069,6.89e-08,2;UBERON:0003051,6.89e-08,2;UBERON:0004637,6.89e-08,2;UBERON:0004761,6.89e-08,2;UBERON:0010113,6.89e-08,2;UBERON:0009123,6.89e-08,2;UBERON:0010351,6.89e-08,2;UBERON:0009617,6.89e-08,2;UBERON:0005641,6.89e-08,2;UBERON:0010349,6.89e-08,2;UBERON:0001894,1.16e-07,10;UBERON:0006222,1.16e-07,10;UBERON:0002256,2.55e-07,2;UBERON:0011216,3.34e-07,194;UBERON:0001896,5.50e-07,2;UBERON:0002298,5.50e-07,2;UBERON:0005290,5.50e-07,2;UBERON:0010096,5.50e-07,2 | |||
|phase1_expression=19.3780104996801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.841299845405528,2.28520787523043,3.3130281142742,0.244981598429908,0.0958454710182364,0,1.10115880999389,1.78762273319263,2.15049146558741,0.527545150920775,0.823388792421687,1.04182674111352,4.18774498502071,3.37657566019008,3.51435969886663,2.65165726926301,2.42031857358475,0.931997229126503,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,12.5350643601246,0,0,0,0,0,0,0,0,1.48442139064825,0.346970653532272,0.304465478312141,0.230615497256059,1.3565037649736,0.587943535678524,0.753999547978053,0,0,0,0.161766849947409,0,0,1.86391761218122,0.292780797011547,1.67557365450764,0,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,3.32460871295296,1.78465389374533,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.81308047821288,0,0,0.315508219416257,0,1.29254038639679,0,0,0.566153061577665,0.404810701674894,1.16902343164525,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,4.42571487479924,0.18006109403131,0.129358683782755,0,0.354680467284547,1.42695054081656,0.658196082408484,3.04464949114599,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,1.66882771809459,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,1.30877970992015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0,0,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.459483751644906,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0 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|phase1_expression=19.3780104996801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.841299845405528,2.28520787523043,3.3130281142742,0.244981598429908,0.0958454710182364,0,1.10115880999389,1.78762273319263,2.15049146558741,0.527545150920775,0.823388792421687,1.04182674111352,4.18774498502071,3.37657566019008,3.51435969886663,2.65165726926301,2.42031857358475,0.931997229126503,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,12.5350643601246,0,0,0,0,0,0,0,0,1.48442139064825,0.346970653532272,0.304465478312141,0.230615497256059,1.3565037649736,0.587943535678524,0.753999547978053,0,0,0,0.161766849947409,0,0,1.86391761218122,0.292780797011547,1.67557365450764,0,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,3.32460871295296,1.78465389374533,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.81308047821288,0,0,0.315508219416257,0,1.29254038639679,0,0,0.566153061577665,0.404810701674894,1.16902343164525,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,4.42571487479924,0.18006109403131,0.129358683782755,0,0.354680467284547,1.42695054081656,0.658196082408484,3.04464949114599,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,1.66882771809459,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,1.30877970992015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0,0,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.459483751644906,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p2@Lhfpl5 | |short_description=p2@Lhfpl5 | ||
}} | }} |
Latest revision as of 04:27, 26 September 2015
Short description: | p2@Lhfpl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lhfpl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:47 |
Association with transcript: | 6bp_to_ENSMUST00000163218, NM_026571, uc008brg.2, uc012aoh.1_5end |
EntrezGene: | Lhfpl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.14e-17 | 33 |
neuronal stem cell | 1.14e-17 | 33 |
neuroblast | 1.14e-17 | 33 |
electrically signaling cell | 1.14e-17 | 33 |
CNS neuron (sensu Vertebrata) | 7.55e-17 | 23 |
neuroblast (sensu Vertebrata) | 7.55e-17 | 23 |
ectodermal cell | 1.58e-14 | 44 |
neurectodermal cell | 1.58e-14 | 44 |
electrically responsive cell | 1.81e-14 | 39 |
electrically active cell | 1.81e-14 | 39 |
neural cell | 7.86e-13 | 43 |
neuron of the substantia nigra | 1.10e-10 | 3 |
raphe nuclei neuron | 2.37e-09 | 3 |
embryonic cell | 6.84e-08 | 70 |
receptor cell | 6.89e-08 | 2 |
auditory epithelial cell | 6.89e-08 | 2 |
sensory epithelial cell | 6.89e-08 | 2 |
neuron of the dorsal spinal cord | 2.55e-07 | 2 |