FFCP PHASE1:Mm9::chr4:12098960..12098998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68099 | |EntrezGene=68099 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-79bp_to_ENSMUST00000152219_5end | |association_with_transcript=-79bp_to_ENSMUST00000152219_5end | ||
|cluster_id=chr4:12098960..12098998,- | |||
|description=CAGE_peak_1_at_Fam92a_5end | |description=CAGE_peak_1_at_Fam92a_5end | ||
|id=chr4:12098960..12098998,- | |id=chr4:12098960..12098998,- | ||
|ontology_enrichment_celltype=CL:0000393!1.42e-09!39;CL:0000211!1.42e-09!39;CL:0000540!3.56e-07!33;CL:0000047!3.56e-07!33;CL:0000031!3.56e-07!33;CL:0000404!3.56e-07!33;CL:0000055!3.80e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.42e-09,39;CL:0000211,1.42e-09,39;CL:0000540,3.56e-07,33;CL:0000047,3.56e-07,33;CL:0000031,3.56e-07,33;CL:0000404,3.56e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.32e-15!75;UBERON:0001016!2.32e-15!75;UBERON:0001017!3.56e-15!73;UBERON:0005743!3.56e-15!73;UBERON:0002346!1.10e-12!71;UBERON:0003075!1.10e-12!71;UBERON:0007284!1.10e-12!71;UBERON:0004121!1.42e-12!102;UBERON:0000924!1.42e-12!102;UBERON:0006601!1.42e-12!102;UBERON:0001049!7.46e-11!52;UBERON:0005068!7.46e-11!52;UBERON:0006241!7.46e-11!52;UBERON:0007135!7.46e-11!52;UBERON:0000033!1.27e-10!63;UBERON:0000955!4.33e-10!50;UBERON:0006238!4.33e-10!50;UBERON:0002616!1.12e-09!49;UBERON:0002020!1.58e-09!34;UBERON:0000025!6.97e-09!114;UBERON:0003056!1.26e-08!49;UBERON:0004111!2.66e-08!122;UBERON:0002021!5.75e-08!10;UBERON:0000411!5.75e-08!10;UBERON:0001950!5.75e-08!10;UBERON:0003080!1.80e-07!40;UBERON:0002791!2.51e-07!29;UBERON:0003528!2.51e-07!29;UBERON:0001893!2.51e-07!29;UBERON:0002619!3.01e-07!17;UBERON:0002780!5.06e-07!39;UBERON:0001890!5.06e-07!39;UBERON:0006240!5.06e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.55e-16,92;UBERON:0001016,2.32e-15,75;UBERON:0001017,3.56e-15,73;UBERON:0002346,1.26e-13,64;UBERON:0003075,1.26e-13,64;UBERON:0007284,1.26e-13,64;UBERON:0004121,4.23e-13,95;UBERON:0000924,4.23e-13,95;UBERON:0006601,4.23e-13,95;UBERON:0000073,7.01e-12,54;UBERON:0010371,4.16e-11,73;UBERON:0001049,7.46e-11,52;UBERON:0005068,7.46e-11,52;UBERON:0006241,7.46e-11,52;UBERON:0007135,7.46e-11,52;UBERON:0002020,1.58e-09,34;UBERON:0000025,6.97e-09,114;UBERON:0000955,1.26e-08,47;UBERON:0006238,1.26e-08,47;UBERON:0003056,1.26e-08,49;UBERON:0004111,2.66e-08,122;UBERON:0002616,3.12e-08,46;UBERON:0002021,5.75e-08,10;UBERON:0000411,5.75e-08,10;UBERON:0001950,5.75e-08,10;UBERON:0003080,1.80e-07,40;UBERON:0003528,2.51e-07,29;UBERON:0002791,2.51e-07,29;UBERON:0001893,2.51e-07,29;UBERON:0002619,3.01e-07,17;UBERON:0002780,5.06e-07,39;UBERON:0001890,5.06e-07,39;UBERON:0006240,5.06e-07,39 | |||
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| ||
|short_description=p1@Fam92a | |short_description=p1@Fam92a | ||
}} | }} |
Latest revision as of 07:08, 26 September 2015
Short description: | p1@Fam92a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam92a_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -79bp_to_ENSMUST00000152219_5end |
EntrezGene: | Fam92a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.42e-09 | 39 |
electrically active cell | 1.42e-09 | 39 |
neuron | 3.56e-07 | 33 |
neuronal stem cell | 3.56e-07 | 33 |
neuroblast | 3.56e-07 | 33 |
electrically signaling cell | 3.56e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.55e-16 | 92 |
nervous system | 2.32e-15 | 75 |
central nervous system | 3.56e-15 | 73 |
neurectoderm | 1.26e-13 | 64 |
neural plate | 1.26e-13 | 64 |
presumptive neural plate | 1.26e-13 | 64 |
ectoderm-derived structure | 4.23e-13 | 95 |
ectoderm | 4.23e-13 | 95 |
presumptive ectoderm | 4.23e-13 | 95 |
regional part of nervous system | 7.01e-12 | 54 |
ecto-epithelium | 4.16e-11 | 73 |
neural tube | 7.46e-11 | 52 |
neural rod | 7.46e-11 | 52 |
future spinal cord | 7.46e-11 | 52 |
neural keel | 7.46e-11 | 52 |
gray matter | 1.58e-09 | 34 |
tube | 6.97e-09 | 114 |
brain | 1.26e-08 | 47 |
future brain | 1.26e-08 | 47 |
pre-chordal neural plate | 1.26e-08 | 49 |
anatomical conduit | 2.66e-08 | 122 |
regional part of brain | 3.12e-08 | 46 |
occipital lobe | 5.75e-08 | 10 |
visual cortex | 5.75e-08 | 10 |
neocortex | 5.75e-08 | 10 |
anterior neural tube | 1.80e-07 | 40 |
brain grey matter | 2.51e-07 | 29 |
regional part of telencephalon | 2.51e-07 | 29 |
telencephalon | 2.51e-07 | 29 |
regional part of cerebral cortex | 3.01e-07 | 17 |
regional part of forebrain | 5.06e-07 | 39 |
forebrain | 5.06e-07 | 39 |
future forebrain | 5.06e-07 | 39 |