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FFCP PHASE1:Mm9::chr12:110306383..110306457,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=380785
|EntrezGene=380785
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q68EF6
|UniProt=Q68EF6
|association_with_transcript=0bp_to_NM_001163175,uc007pal.1_5end
|association_with_transcript=0bp_to_NM_001163175,uc007pal.1_5end
|cluster_id=chr12:110306383..110306457,-
|description=CAGE_peak_1_at_Begain_5end
|description=CAGE_peak_1_at_Begain_5end
|id=chr12:110306383..110306457,-
|id=chr12:110306383..110306457,-
|ontology_enrichment_celltype=CL:0000117!2.06e-12!23;CL:0000337!2.06e-12!23;CL:0000540!6.74e-07!33;CL:0000047!6.74e-07!33;CL:0000031!6.74e-07!33;CL:0000404!6.74e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.24e-14,23;CL:0000337,3.24e-14,23;CL:0000540,1.64e-07,33;CL:0000047,1.64e-07,33;CL:0000031,1.64e-07,33;CL:0000404,1.64e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!6.47e-18!34;UBERON:0001049!6.61e-18!52;UBERON:0005068!6.61e-18!52;UBERON:0006241!6.61e-18!52;UBERON:0007135!6.61e-18!52;UBERON:0000955!9.21e-17!50;UBERON:0006238!9.21e-17!50;UBERON:0001017!3.41e-16!73;UBERON:0005743!3.41e-16!73;UBERON:0002616!3.98e-16!49;UBERON:0003080!1.30e-15!40;UBERON:0003056!1.41e-15!49;UBERON:0000033!1.42e-15!63;UBERON:0000073!2.14e-15!75;UBERON:0001016!2.14e-15!75;UBERON:0002780!4.78e-15!39;UBERON:0001890!4.78e-15!39;UBERON:0006240!4.78e-15!39;UBERON:0002791!6.66e-15!29;UBERON:0003528!6.66e-15!29;UBERON:0001893!6.66e-15!29;UBERON:0000153!1.33e-14!94;UBERON:0002346!1.33e-14!71;UBERON:0003075!1.33e-14!71;UBERON:0007284!1.33e-14!71;UBERON:0004121!2.81e-14!102;UBERON:0000924!2.81e-14!102;UBERON:0006601!2.81e-14!102;UBERON:0007811!2.67e-13!86;UBERON:0000956!3.90e-11!21;UBERON:0001869!3.90e-11!21;UBERON:0000203!3.90e-11!21;UBERON:0002619!3.31e-09!17;UBERON:0002021!2.75e-08!10;UBERON:0000411!2.75e-08!10;UBERON:0001950!2.75e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.46e-21,54;UBERON:0002020,3.81e-20,34;UBERON:0001049,2.30e-19,52;UBERON:0005068,2.30e-19,52;UBERON:0006241,2.30e-19,52;UBERON:0007135,2.30e-19,52;UBERON:0001017,3.66e-17,73;UBERON:0002346,5.57e-17,64;UBERON:0003075,5.57e-17,64;UBERON:0007284,5.57e-17,64;UBERON:0010371,5.75e-17,73;UBERON:0003528,1.21e-16,29;UBERON:0002791,1.21e-16,29;UBERON:0001893,1.21e-16,29;UBERON:0003080,1.60e-16,40;UBERON:0000955,4.44e-16,47;UBERON:0006238,4.44e-16,47;UBERON:0001016,4.68e-16,75;UBERON:0002780,7.07e-16,39;UBERON:0001890,7.07e-16,39;UBERON:0006240,7.07e-16,39;UBERON:0003056,7.08e-16,49;UBERON:0002616,2.25e-15,46;UBERON:0004121,5.18e-15,95;UBERON:0000924,5.18e-15,95;UBERON:0006601,5.18e-15,95;UBERON:0000956,2.95e-12,21;UBERON:0001869,2.95e-12,21;UBERON:0000203,2.95e-12,21;UBERON:0002619,5.17e-10,17;UBERON:0002021,2.08e-09,10;UBERON:0000411,2.08e-09,10;UBERON:0001950,2.08e-09,10;UBERON:0010314,1.29e-07,92
|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,1.16210991097419,0.84473233291,1.40438715793196,1.88339765048055,1.7549874978974,0.684802919724823,0.611942816932982,0,0,0,0.473193248037357,0,0,4.25216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.31790010585369,0.917733760808408,0,0,0.659058548203415,0.194429899074283,1.25987779462826,0,0.167782606057736,0.725362142011344,0,1.02903774414379,0,0,5.05791152148994,6.34789175126439,3.80298842103708,4.74382344896785,2.66788438833342,0,0,0,3.29560121570245,0.768436610643109,4.25127410464758,5.53524347159932,3.36519938162211,12.5686433137674,9.27647871996777,4.04219637409348,6.03826467414889,5.51531271966013,6.60695285996332,10.9811110753261,8.60196586234964,5.01167893374737,6.77008562657831,3.12548022334056,6.70039197603314,1.68828783009504,8.09830713217094,7.95497180778903,11.8168495063255,6.15118171223492,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,1.25602267690966,0.776813650941515,0.29688427812965,1.04091196059682,0.608930956624282,0.922461989024234,0.60289056221049,1.41106448562846,0.251333182659351,0,0.86759614151947,0,1.94120219936891,0.662524555381181,0.969750506270444,0,1.46390398505774,0.83778682725382,0.255457055208591,0.11981512450592,0,0,7.63932260964596,15.5550204958333,15.0785222535437,24.3354048269187,33.7544403676036,9.55825004973976,13.7905073607594,2.44414473240759,0.248813941220186,0,0.631325567659422,1.17108398666433,1.83921683546778,2.34080768746954,2.41127708537144,1.90502197623718,1.66547836370305,1.40552586839593,0.776110112217047,0.646703978798527,1.51284864134255,2.28736461413134,2.84954452155847,2.50242524303038,4.52727816478817,1.64625709126355,1.99034266818493,0,0.257347907114715,0,0,0.234526059981096,0.180062061461015,1.42046841351126,0.196764231747404,0.617068451549513,0,0.268273401399619,0.583826711835847,0.822799249567402,0.492502392237286,0.324275238183423,0.292399974850665,0.878200461164203,0.134206418760372,25.6553737248235,9.77593817603202,0,0,0.426576501070468,1.85789337488351,1.28867461322093,2.01683524623343,0.889512175379481,0.760902504450237,0.474529061544512,1.15289268306808,1.00534083520108,0.994782360205754,0.779856348476481,0.898819408654221,0,0.398282546508734,1.13800740571849,1.14248512609729,0,0.610953983535943,1.35766741017338,1.33258057791605,1.26473074248515,0.442830443938806,0,0,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0,1.51593129416388,1.14075483509418,1.18821560042632,1.17345124144251,1.17254380209271,0.476087281772027,0.585400943573396,0.945810864637146,0,0,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.551873492609465,6.10092241953609,4.80567915028033,3.77050374366353,0,0,0.780877488593277,0,0.716906393857656,0.222798674082394,0.283076530788832,0,0.876767573733936,0,17.0300297703558,1.41940085208269,4.45164009168138,5.37526965866801,1.97964147567043,0,0.728341908464944,2.41858845571801,0.754420319023592,2.36241514304618,2.15204603560749,3.6179961043551,2.54473610634254,1.78248689192361,0.316036757935816,0,0,0.680879211507576,1.26042765821917,1.16422815404479,1.50035924522115,1.24138163549592,1.96205699362278,0.987294123612726,1.8267896946876,0,0,0,1.81374878235628,2.74489525383039,2.5934557719107,2.26807453605959,1.96969079694074,0,7.78786268444141,0.341741761595705,0.82554747185289,0.740778109478847,0,0,0.228778173206523,1.18984900995699,0.839708713941948,0.690999869022119,0,1.73984796469624,3.65975040828328,1.51207477150522,1.46361807210128,1.52853794622324,0.674321731924103,0.909188012978695,0.785267825952089,0,0,0,0.747582730219894,1.48912641411388,2.13896307178452,2.84151611651008,3.37912250981556,3.0512882047896,0.911430693907651,1.99232754408851,0.241584120826006,0.288030006257865,2.52808896502543,2.02725215290164,1.43795340030758,0.649604114888975,1.61124026100733,0.39736270956253,1.20195449519969,1.32920574457119,0.706765149637033,0.914481679859998,0.504130925684203,1.26695244961678,1.53938946624527,1.8700304349051,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,1.46521299413812,0.214368379079066,0,31.6261031865557,35.4450432110526,36.6653128601214,35.0580491981123,30.8287133896789,33.2373314851468,25.6508550088086,35.1250538514892,28.5479717660049,37.278742446131,1.24544817101012,1.59609949360412,2.73173769206615,1.70174701947806,1.25767897576789,2.02227859295016,2.889207461421,0.824140228955577,1.92551525755089,3.53776096469316,2.28131369901216,1.50901073108861,3.27745276144588,3.00918216302886,2.81433797882505,4.28664322154766,5.09891034157364,2.12200142510076,2.47251540481984,2.20798380201596,1.37147700954166,2.30718548007139,3.09967046931517,1.74415699958794,2.07040636913727,2.70766745253365,2.74391959309159,1.8414879800649,3.25929873230068,3.36685362994643,2.96587545310435,2.56111654176465,3.6830793885272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|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,1.16210991097419,0.84473233291,1.40438715793196,1.88339765048055,1.7549874978974,0.684802919724823,0.611942816932982,0,0,0,0.473193248037357,0,0,4.25216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.31790010585369,0.917733760808408,0,0,0.659058548203415,0.194429899074283,1.25987779462826,0,0.167782606057736,0.725362142011344,0,1.02903774414379,0,0,5.05791152148994,6.34789175126439,3.80298842103708,4.74382344896785,2.66788438833342,0,0,0,3.29560121570245,0.768436610643109,4.25127410464758,5.53524347159932,3.36519938162211,12.5686433137674,9.27647871996777,4.04219637409348,6.03826467414889,5.51531271966013,6.60695285996332,10.9811110753261,8.60196586234964,5.01167893374737,6.77008562657831,3.12548022334056,6.70039197603314,1.68828783009504,8.09830713217094,7.95497180778903,11.8168495063255,6.15118171223492,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,1.25602267690966,0.776813650941515,0.29688427812965,1.04091196059682,0.608930956624282,0.922461989024234,0.60289056221049,1.41106448562846,0.251333182659351,0,0.86759614151947,0,1.94120219936891,0.662524555381181,0.969750506270444,0,1.46390398505774,0.83778682725382,0.255457055208591,0.11981512450592,0,0,7.63932260964596,15.5550204958333,15.0785222535437,24.3354048269187,33.7544403676036,9.55825004973976,13.7905073607594,2.44414473240759,0.248813941220186,0,0.631325567659422,1.17108398666433,1.83921683546778,2.34080768746954,2.41127708537144,1.90502197623718,1.66547836370305,1.40552586839593,0.776110112217047,0.646703978798527,1.51284864134255,2.28736461413134,2.84954452155847,2.50242524303038,4.52727816478817,1.64625709126355,1.99034266818493,0,0.257347907114715,0,0,0.234526059981096,0.180062061461015,1.42046841351126,0.196764231747404,0.617068451549513,0,0.268273401399619,0.583826711835847,0.822799249567402,0.492502392237286,0.324275238183423,0.292399974850665,0.878200461164203,0.134206418760372,25.6553737248235,9.77593817603202,0,0,0.426576501070468,1.85789337488351,1.28867461322093,2.01683524623343,0.889512175379481,0.760902504450237,0.474529061544512,1.15289268306808,1.00534083520108,0.994782360205754,0.779856348476481,0.898819408654221,0,0.398282546508734,1.13800740571849,1.14248512609729,0,0.610953983535943,1.35766741017338,1.33258057791605,1.26473074248515,0.442830443938806,0,0,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0,1.51593129416388,1.14075483509418,1.18821560042632,1.17345124144251,1.17254380209271,0.476087281772027,0.585400943573396,0.945810864637146,0,0,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.551873492609465,6.10092241953609,4.80567915028033,3.77050374366353,0,0,0.780877488593277,0,0.716906393857656,0.222798674082394,0.283076530788832,0,0.876767573733936,0,17.0300297703558,1.41940085208269,4.45164009168138,5.37526965866801,1.97964147567043,0,0.728341908464944,2.41858845571801,0.754420319023592,2.36241514304618,2.15204603560749,3.6179961043551,2.54473610634254,1.78248689192361,0.316036757935816,0,0,0.680879211507576,1.26042765821917,1.16422815404479,1.50035924522115,1.24138163549592,1.96205699362278,0.987294123612726,1.8267896946876,0,0,0,1.81374878235628,2.74489525383039,2.5934557719107,2.26807453605959,1.96969079694074,0,7.78786268444141,0.341741761595705,0.82554747185289,0.740778109478847,0,0,0.228778173206523,1.18984900995699,0.839708713941948,0.690999869022119,0,1.73984796469624,3.65975040828328,1.51207477150522,1.46361807210128,1.52853794622324,0.674321731924103,0.909188012978695,0.785267825952089,0,0,0,0.747582730219894,1.48912641411388,2.13896307178452,2.84151611651008,3.37912250981556,3.0512882047896,0.911430693907651,1.99232754408851,0.241584120826006,0.288030006257865,2.52808896502543,2.02725215290164,1.43795340030758,0.649604114888975,1.61124026100733,0.39736270956253,1.20195449519969,1.32920574457119,0.706765149637033,0.914481679859998,0.504130925684203,1.26695244961678,1.53938946624527,1.8700304349051,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,1.46521299413812,0.214368379079066,0,31.6261031865557,35.4450432110526,36.6653128601214,35.0580491981123,30.8287133896789,33.2373314851468,25.6508550088086,35.1250538514892,28.5479717660049,37.278742446131,1.24544817101012,1.59609949360412,2.73173769206615,1.70174701947806,1.25767897576789,2.02227859295016,2.889207461421,0.824140228955577,1.92551525755089,3.53776096469316,2.28131369901216,1.50901073108861,3.27745276144588,3.00918216302886,2.81433797882505,4.28664322154766,5.09891034157364,2.12200142510076,2.47251540481984,2.20798380201596,1.37147700954166,2.30718548007139,3.09967046931517,1.74415699958794,2.07040636913727,2.70766745253365,2.74391959309159,1.8414879800649,3.25929873230068,3.36685362994643,2.96587545310435,2.56111654176465,3.6830793885272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|short_description=p1@Begain
|short_description=p1@Begain
}}
}}

Latest revision as of 07:17, 26 September 2015

Short description:p1@Begain
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Begain_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_NM_001163175, uc007pal.1_5end
EntrezGene:Begain
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Begain

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D524.34
cortex, neonate N30.CNhs11107.1392-42F233.75
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B213.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E825.66
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A34.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I45.38
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.28
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.24e-1423
neuroblast (sensu Vertebrata)3.24e-1423
neuron1.64e-0733
neuronal stem cell1.64e-0733
neuroblast1.64e-0733
electrically signaling cell1.64e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.46e-2154
gray matter3.81e-2034
neural tube2.30e-1952
neural rod2.30e-1952
future spinal cord2.30e-1952
neural keel2.30e-1952
central nervous system3.66e-1773
neurectoderm5.57e-1764
neural plate5.57e-1764
presumptive neural plate5.57e-1764
ecto-epithelium5.75e-1773
brain grey matter1.21e-1629
regional part of telencephalon1.21e-1629
telencephalon1.21e-1629
anterior neural tube1.60e-1640
brain4.44e-1647
future brain4.44e-1647
nervous system4.68e-1675
regional part of forebrain7.07e-1639
forebrain7.07e-1639
future forebrain7.07e-1639
pre-chordal neural plate7.08e-1649
regional part of brain2.25e-1546
ectoderm-derived structure5.18e-1595
ectoderm5.18e-1595
presumptive ectoderm5.18e-1595
cerebral cortex2.95e-1221
cerebral hemisphere2.95e-1221
pallium2.95e-1221
regional part of cerebral cortex5.17e-1017
occipital lobe2.08e-0910
visual cortex2.08e-0910
neocortex2.08e-0910
structure with developmental contribution from neural crest1.29e-0792
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