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FFCP PHASE1:Mm9::chr4:126430990..126431026,-: Difference between revisions

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(Created page with "{{FFCP |id=chr4:126430990..126431026,- |short_description=p2@Ncdn |description=CAGE_peak_2_at_Ncdn_5end |association_with_transcript=-308bp_to_ENSMUST00000127079_5end |En...")
 
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{{FFCP
{{FFCP
|id=chr4:126430990..126431026,-
|DHSsupport=NA
|short_description=p2@Ncdn
|DPIdataset=NA
|description=CAGE_peak_2_at_Ncdn_5end
|association_with_transcript=-308bp_to_ENSMUST00000127079_5end
|EntrezGene=26562
|EntrezGene=26562
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-308bp_to_ENSMUST00000127079_5end
|cluster_id=chr4:126430990..126431026,-
|description=CAGE_peak_2_at_Ncdn_5end
|id=chr4:126430990..126431026,-
|ontology_enrichment_celltype=CL:0002319!6.91e-12!43;CL:0000221!1.40e-11!44;CL:0000133!1.40e-11!44;CL:0000540!9.71e-11!33;CL:0000047!9.71e-11!33;CL:0000031!9.71e-11!33;CL:0000404!9.71e-11!33;CL:0000117!2.04e-10!23;CL:0000337!2.04e-10!23;CL:0000055!3.77e-08!50;CL:0000393!1.92e-07!39;CL:0000211!1.92e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002319,6.91e-12,43;CL:0000221,1.40e-11,44;CL:0000133,1.40e-11,44;CL:0000540,9.71e-11,33;CL:0000047,9.71e-11,33;CL:0000031,9.71e-11,33;CL:0000404,9.71e-11,33;CL:0000117,2.04e-10,23;CL:0000337,2.04e-10,23;CL:0000393,1.98e-07,39;CL:0000211,1.98e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.55e-25,73;UBERON:0001016,9.12e-25,75;UBERON:0004121,3.69e-24,95;UBERON:0000924,3.69e-24,95;UBERON:0006601,3.69e-24,95;UBERON:0000073,3.26e-20,54;UBERON:0001049,8.03e-19,52;UBERON:0005068,8.03e-19,52;UBERON:0006241,8.03e-19,52;UBERON:0007135,8.03e-19,52;UBERON:0002346,3.91e-18,64;UBERON:0003075,3.91e-18,64;UBERON:0007284,3.91e-18,64;UBERON:0010371,4.41e-17,73;UBERON:0002020,9.00e-17,34;UBERON:0000955,5.29e-16,47;UBERON:0006238,5.29e-16,47;UBERON:0002616,1.83e-15,46;UBERON:0003528,4.67e-14,29;UBERON:0002791,4.67e-14,29;UBERON:0001893,4.67e-14,29;UBERON:0003080,1.35e-13,40;UBERON:0002780,6.20e-13,39;UBERON:0001890,6.20e-13,39;UBERON:0006240,6.20e-13,39;UBERON:0010314,9.29e-13,92;UBERON:0003056,3.80e-12,49;UBERON:0000956,8.28e-11,21;UBERON:0001869,8.28e-11,21;UBERON:0000203,8.28e-11,21;UBERON:0002619,1.01e-09,17;UBERON:0002021,7.61e-08,10;UBERON:0000411,7.61e-08,10;UBERON:0001950,7.61e-08,10
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9,2.83871332870031,2.83215127408124,4.1326727862668,3.92633912976044,3.36998930558661,4.97071450469541,1.12738587736838,4.18646328923141,3.97100377097034,3.30567020184881,3.87479470433193,1.85851738039856,4.10750335260139,2.21347454234715,3.46035836604846,2.17425708743405,2.30424005006292,2.8441000856536,4.66267995167378,2.67048488628551,2.33857481360031,3.75956060901711,2.58285761215644,2.28371354087941,2.65841148914239,3.83672509802961,1.752756553065,2.11734988787365,3.41102582589133,2.30908419936791,2.45441494581295,5.21479882314986,1.99787358036658,2.24284641523689,1.67884616364078,5.9888774149979,3.94133198447482,4.2124873581471,5.35920947697665,9.5298699766719,35.5793660848752,34.9847179745454,35.5195218332426,33.1676641923317,37.6795385873853,33.2373314851468,29.0259675099676,30.621841819247,36.2513927187364,27.9590568345983,4.25528125095124,5.98537310101547,3.41467211508268,2.91728060481953,6.28839487883947,5.51530525350042,4.00044110042907,6.38708677440572,5.77654577265267,5.81203587056734,4.05566879824384,6.03604292435444,4.40115085108447,3.77748399188729,3.84817642002609,5.23923060411381,3.01299247456624,4.62982129112892,1.64834360321323,4.12156976376312,4.4573002810104,5.50174999093946,3.33810665926249,4.21504608233753,4.23492211868988,4.39995961036718,4.20734337607377,4.20911538300549,3.93831930152999,5.05028044491965,4.62676570684279,4.0386837773981,2.86461730218783,4.18329471202108,4.24394544158511,8.49355964989016,4.44470056046276,6.87587372954555,5.92993829413414,2.20591419119516,4.86922454802885
|phase1_expression=2.08193501236232,6.63053274514786,7.73498706962211,3.93203474698879,4.00716583957078,4.70061961353291,5.13947809310157,0.774739940649458,1.54867594366833,0.936258105287974,2.91070545983358,2.15384829287408,2.56801094896809,1.48614684112296,1.66554880907831,1.01237633694913,0.699561878128147,1.89277299214943,1.09691546884591,0.42438965179803,6.71841992193451,4.76596565764249,3.13439746966722,5.59973479776923,5.04700418347774,6.89078356938024,4.30761996159075,4.95583835177545,3.42042155021473,4.53654233567875,3.76941868114018,17.14582818341,11.6862309641068,15.8481681015439,2.02196133825892,1.49611180822643,2.45003227514843,2.09265815368454,0.7813353445238,0,2.35292595212406,2.73218193983378,0.485510353031154,1.6366586336825,1.31790010585369,0.917733760808408,5.47673941043627,4.14247797122848,5.05278220289285,5.8328969722285,3.77963338388479,7.18762821824858,1.34226084846189,0,4.36921938885203,3.60163210450326,4.58453503902011,3.09403255366465,10.1158230429799,16.9277113367051,12.0427966666174,2.71075625655306,7.11435836888911,4.94944844504769,6.92206453796882,5.6838409195688,8.68840320503374,5.76327457982332,4.87341177849845,8.37036817656482,4.6271491497304,15.996455126613,19.2155630627904,4.5321595709533,5.84657373211242,11.9498442259303,36.3382407297983,26.4312789836339,35.7903222487047,8.96826756565318,11.2529801630964,3.64639359389732,30.4309468911505,19.1339287410771,21.0861581931998,16.7938293719991,15.233769845504,15.2847545576746,3.18050011999373,5.89458168832927,2.31891590961342,1.72084775396277,4.75979933595425,1.61910957491345,3.89865850468601,3.58421509677868,3.37066608316204,2.38602451609281,2.59786004602869,1.41335829804136,3.66192891419369,3.84979432242953,0,0,3.24736561516821,3.54703811665138,4.04419556011827,3.19714863213368,1.55362730188303,4.15637989381509,2.94925055502431,5.78484408793068,5.76538743140146,3.3158980921577,6.70255630673517,2.89033160058254,5.6854842578906,4.33798070759735,6.19227386364912,3.23533699894818,3.5334642953663,4.363877278217,1.86391761218122,7.61230072230023,5.65506108396329,4.85368404896324,3.83408398418945,1.79970819298022,2.66847476853436,38.3464036876346,32.9400434029411,12.3141265070607,46.4110934913378,32.9872939956126,28.2591740601002,22.3892943033506,4.88828946481518,3.4833951770826,3.79084137650512,2.31486041475121,2.99277018814219,2.75882525320168,4.50155324513373,3.16480117455002,6.05524842446818,6.40568601424249,4.68508622798644,4.9153640440413,3.88022387279116,3.02569728268511,2.99116911078713,2.19195732427575,1.66828349535359,2.089512999133,3.49829631893504,1.19420560091096,3.51106593656617,4.11756651383544,2.55747149456033,4.55676699578104,3.98694301967864,4.14142741360334,5.44512891845984,4.32881309844288,2.77680803197281,2.79040733700489,4.02410102099429,2.45207218971056,3.62031669809657,2.95501435342371,3.08061476274252,2.92399974850665,2.19550115291051,3.08674763148855,33.6463917702604,11.5253165864799,5.61711931072457,5.81791246659797,4.26576501070468,3.94802342162745,5.15469845288373,3.83198696784351,5.33707305227689,3.42406127002606,4.2707615539006,5.76446341534038,2.26201687920243,3.97912944082302,4.28920991662064,5.39291645192533,4.53889904736858,5.77509692437665,2.84501851429623,3.77020091612105,1.1270773567308,3.05476991767971,1.93952487167626,4.20814919341911,2.46622494784603,1.91893192373483,2.66897837330337,1.60416313098341,1.77871576252289,3.67059232575407,3.73462090715086,1.79889689907883,3.04290182082754,3.85883455603867,2.29163266603278,4.02774592431135,2.91843408195064,2.19649130550465,4.31304619582064,1.11642284300551,4.36852742360385,2.02063102357689,3.40855085691633,1.4473305640901,1.84753190166605,2.65287976478679,2.60743962307241,2.71592137240301,1.40814148973101,4.18765643604539,3.80869825417622,3.31727201358258,3.15270288212382,2.87904096543407,2.23236676120482,1.96635977658886,2.93564469172023,2.16973587872267,3.01582567878545,4.35124547054968,8.35999264132362,3.03530420935206,23.6009367282054,20.3948334670434,3.77050374366353,4.03953483526997,5.04813151066011,5.46614242015294,8.83235930704476,4.54040716109849,5.79276552614225,3.11384183867716,6.47697122679831,8.18316402151673,5.13874111330481,16.3873871375122,3.12268187458191,4.45164009168138,3.90928702448583,5.1140738121486,7.96470830039777,3.64170954232472,1.209294227859,2.82907619633847,8.26845300066164,4.61152721915891,4.39328098385976,2.54473610634254,3.20847640546249,2.21225730555071,1.05418608574999,5.15677716240934,4.08527526904546,3.06103859853227,4.39819524861365,3.21505552547388,4.07882537377229,3.92411398724555,3.1264313914403,7.00269382963578,4.22409074514679,3.1774810629573,7.27743713581374,5.60613260001032,4.35953952078945,3.92034012033013,5.61050016814741,3.61109979439135,4.37221254944776,28.5554965096185,2.05045056957423,1.65109494370578,2.96311243791539,2.26042148405629,2.46049609897845,1.60144721244566,2.03974115992626,3.35883485576779,2.9021994498929,6.68269432610579,3.95419991976419,4.26970880966382,3.67218158794124,2.71814784818809,2.83871332870031,2.83215127408124,4.1326727862668,3.92633912976044,3.36998930558661,4.97071450469541,1.12738587736838,4.18646328923141,3.97100377097034,3.30567020184881,3.87479470433193,1.85851738039856,4.10750335260139,2.21347454234715,3.46035836604846,2.17425708743405,2.30424005006292,2.8441000856536,4.66267995167378,2.67048488628551,2.33857481360031,3.75956060901711,2.58285761215644,2.28371354087941,2.65841148914239,3.83672509802961,1.752756553065,2.11734988787365,3.41102582589133,2.30908419936791,2.45441494581295,5.21479882314986,1.99787358036658,2.24284641523689,1.67884616364078,5.9888774149979,3.94133198447482,4.2124873581471,5.35920947697665,9.5298699766719,35.5793660848752,34.9847179745454,35.5195218332426,33.1676641923317,37.6795385873853,33.2373314851468,29.0259675099676,30.621841819247,36.2513927187364,27.9590568345983,4.25528125095124,5.98537310101547,3.41467211508268,2.91728060481953,6.28839487883947,5.51530525350042,4.00044110042907,6.38708677440572,5.77654577265267,5.81203587056734,4.05566879824384,6.03604292435444,4.40115085108447,3.77748399188729,3.84817642002609,5.23923060411381,3.01299247456624,4.62982129112892,1.64834360321323,4.12156976376312,4.4573002810104,5.50174999093946,3.33810665926249,4.21504608233753,4.23492211868988,4.39995961036718,4.20734337607377,4.20911538300549,3.93831930152999,5.05028044491965,4.62676570684279,4.0386837773981,2.86461730218783,4.18329471202108,4.24394544158511,8.49355964989016,4.44470056046276,6.87587372954555,5.92993829413414,2.20591419119516,4.86922454802885
|short_description=p2@Ncdn
}}
}}

Latest revision as of 08:36, 26 September 2015

Short description:p2@Ncdn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ncdn_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -308bp_to_ENSMUST00000127079_5end
EntrezGene:Ncdn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ncdn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D93.18
Mouse Schwann, donor2.CNhs12573.11746-123F95.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C16.70
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A438.35
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F112.31
cortex, adult.CNhs10473.12-14D546.41
cortex, neonate N30.CNhs11107.1392-42F232.99
diencephalon, adult.CNhs10482.20-12F228.26
diencephalon, neonate N30.CNhs11201.1388-42B222.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E833.65
hippocampus, neonate N00.CNhs11228.627-43G111.53
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C223.60
medulla oblongata, neonate N30.CNhs11200.1396-42A320.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I916.39
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F87.28
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H33.92
skin, neonate N06.CNhs11097.693-20I55.61
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C928.56
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A94.13
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C43.84
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A437.68
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.96
whole body, embryo E11.CNhs11014.324-5I84.26
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell6.91e-1243
ectodermal cell1.40e-1144
neurectodermal cell1.40e-1144
neuron9.71e-1133
neuronal stem cell9.71e-1133
neuroblast9.71e-1133
electrically signaling cell9.71e-1133
CNS neuron (sensu Vertebrata)2.04e-1023
neuroblast (sensu Vertebrata)2.04e-1023
electrically responsive cell1.98e-0739
electrically active cell1.98e-0739

Uber anatomy
Ontology termp-valuen
central nervous system6.55e-2573
nervous system9.12e-2575
ectoderm-derived structure3.69e-2495
ectoderm3.69e-2495
presumptive ectoderm3.69e-2495
regional part of nervous system3.26e-2054
neural tube8.03e-1952
neural rod8.03e-1952
future spinal cord8.03e-1952
neural keel8.03e-1952
neurectoderm3.91e-1864
neural plate3.91e-1864
presumptive neural plate3.91e-1864
ecto-epithelium4.41e-1773
gray matter9.00e-1734
brain5.29e-1647
future brain5.29e-1647
regional part of brain1.83e-1546
brain grey matter4.67e-1429
regional part of telencephalon4.67e-1429
telencephalon4.67e-1429
anterior neural tube1.35e-1340
regional part of forebrain6.20e-1339
forebrain6.20e-1339
future forebrain6.20e-1339
structure with developmental contribution from neural crest9.29e-1392
pre-chordal neural plate3.80e-1249
cerebral cortex8.28e-1121
cerebral hemisphere8.28e-1121
pallium8.28e-1121
regional part of cerebral cortex1.01e-0917
occipital lobe7.61e-0810
visual cortex7.61e-0810
neocortex7.61e-0810
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