FFCP PHASE1:Mm9::chr10:79256403..79256418,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:79256403..79256418,+ to FFCP PHASE1:Mm9::chr10:79256403..79256418,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18483 | |EntrezGene=18483 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2583 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0P4,Q3TRX4,Q542N8,Q8CB16,Q3UZP7 | |UniProt=Q9Z0P4,Q3TRX4,Q542N8,Q8CB16,Q3UZP7 | ||
|association_with_transcript=86bp_to_ENSMUST00000046945,ENSMUST00000105379,NM_001161747,NM_023128,uc007fzv.2,uc007fzw.2,uc007fzx.2_5end | |||
|cluster_id=chr10:79256403..79256418,+ | |||
|description=CAGE_peak_3_at_Palm_5end | |||
|id=chr10:79256403..79256418,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.12e-19!50;CL:0000221!1.09e-16!44;CL:0000133!1.09e-16!44;CL:0000393!1.55e-16!39;CL:0000211!1.55e-16!39;CL:0002319!3.20e-16!43;CL:0000540!2.70e-13!33;CL:0000047!2.70e-13!33;CL:0000031!2.70e-13!33;CL:0000404!2.70e-13!33;CL:0002321!3.71e-09!70;CL:0000220!3.71e-09!70;CL:0000117!1.65e-08!23;CL:0000337!1.65e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.30e-17,44;CL:0000133,4.30e-17,44;CL:0000393,6.15e-17,39;CL:0000211,6.15e-17,39;CL:0002319,1.30e-16,43;CL:0000540,1.31e-13,33;CL:0000047,1.31e-13,33;CL:0000031,1.31e-13,33;CL:0000404,1.31e-13,33;CL:0002321,1.56e-10,70;CL:0000117,1.08e-08,23;CL:0000337,1.08e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.22e-27!73;UBERON:0005743!1.22e-27!73;UBERON:0000073!9.48e-27!75;UBERON:0001016!9.48e-27!75;UBERON:0004121!6.18e-23!102;UBERON:0000924!6.18e-23!102;UBERON:0006601!6.18e-23!102;UBERON:0000955!2.95e-17!50;UBERON:0006238!2.95e-17!50;UBERON:0001049!3.35e-17!52;UBERON:0005068!3.35e-17!52;UBERON:0006241!3.35e-17!52;UBERON:0007135!3.35e-17!52;UBERON:0002616!4.46e-17!49;UBERON:0002346!2.37e-16!71;UBERON:0003075!2.37e-16!71;UBERON:0007284!2.37e-16!71;UBERON:0000033!3.37e-16!63;UBERON:0003080!5.18e-13!40;UBERON:0002020!7.05e-13!34;UBERON:0002780!1.09e-12!39;UBERON:0001890!1.09e-12!39;UBERON:0006240!1.09e-12!39;UBERON:0002791!7.67e-12!29;UBERON:0003528!7.67e-12!29;UBERON:0001893!7.67e-12!29;UBERON:0003056!7.68e-12!49;UBERON:0000956!1.01e-09!21;UBERON:0001869!1.01e-09!21;UBERON:0000203!1.01e-09!21;UBERON:0004111!4.99e-09!122;UBERON:0002619!8.69e-09!17;UBERON:0000025!9.29e-09!114;UBERON:0000153!2.25e-07!94;UBERON:0007811!2.78e-07!86;UBERON:0002021!4.05e-07!10;UBERON:0000411!4.05e-07!10;UBERON:0001950!4.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.43e-28,73;UBERON:0001016,2.00e-27,75;UBERON:0004121,1.68e-23,95;UBERON:0000924,1.68e-23,95;UBERON:0006601,1.68e-23,95;UBERON:0000073,9.59e-19,54;UBERON:0010314,1.29e-18,92;UBERON:0002346,1.13e-17,64;UBERON:0003075,1.13e-17,64;UBERON:0007284,1.13e-17,64;UBERON:0001049,1.28e-17,52;UBERON:0005068,1.28e-17,52;UBERON:0006241,1.28e-17,52;UBERON:0007135,1.28e-17,52;UBERON:0010371,1.08e-16,73;UBERON:0000955,4.28e-16,47;UBERON:0006238,4.28e-16,47;UBERON:0002616,6.49e-16,46;UBERON:0003080,2.56e-13,40;UBERON:0002020,3.51e-13,34;UBERON:0002780,5.48e-13,39;UBERON:0001890,5.48e-13,39;UBERON:0006240,5.48e-13,39;UBERON:0003528,4.07e-12,29;UBERON:0002791,4.07e-12,29;UBERON:0001893,4.07e-12,29;UBERON:0003056,6.46e-12,49;UBERON:0000956,6.13e-10,21;UBERON:0001869,6.13e-10,21;UBERON:0000203,6.13e-10,21;UBERON:0002619,5.56e-09,17;UBERON:0004111,8.16e-09,122;UBERON:0000025,1.17e-08,114;UBERON:0002021,2.87e-07,10;UBERON:0000411,2.87e-07,10;UBERON:0001950,2.87e-07,10 | |||
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| ||
|short_description=p3@Palm | |||
}} | }} |
Latest revision as of 09:01, 26 September 2015
Short description: | p3@Palm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Palm_5end |
Coexpression cluster: | MCL_coexpression_mm9:2583 |
Association with transcript: | 86bp_to_ENSMUST00000046945, ENSMUST00000105379, NM_001161747, NM_023128, uc007fzv.2, uc007fzw.2, uc007fzx.2_5end |
EntrezGene: | Palm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.30e-17 | 44 |
neurectodermal cell | 4.30e-17 | 44 |
electrically responsive cell | 6.15e-17 | 39 |
electrically active cell | 6.15e-17 | 39 |
neural cell | 1.30e-16 | 43 |
neuron | 1.31e-13 | 33 |
neuronal stem cell | 1.31e-13 | 33 |
neuroblast | 1.31e-13 | 33 |
electrically signaling cell | 1.31e-13 | 33 |
embryonic cell | 1.56e-10 | 70 |
CNS neuron (sensu Vertebrata) | 1.08e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-08 | 23 |